EWM29906.1, cds761 (CDS) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	EWM29906.1
Unique Name	cds761
Type	CDS
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Alignment location	CM002456.1:362487..362597 +
Alignment location	CM002456.1:362943..364100 +

Link to JBrowse

Properties


Property Name	Value
Protein id	EWM29906.1
Product	homoserine kinase
Orig transcript id	gnl\|cribi\|Naga_100035g25.3370.mrna
Gbkey	CDS

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
CM002456.1	supercontig	CM002456.1:362487..362597 +
CM002456.1	supercontig	CM002456.1:362943..364100 +

Analyses

This CDS is derived from or has results from the following analyses


Analysis Name	Date Performed
GO annotation for N. gaditana B31	2020-04-08
BLAST analysis for N. gaditana B-31	2020-04-07
InterPro analysis for N. gaditana B-31	2020-04-06
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

The following terms have been associated with this CDS:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016301	kinase activity
GO:0000166	nucleotide binding
GO:0004413	homoserine kinase activity
GO:0005524	ATP binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006566	threonine metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR020568	Ribosomal_S5_D2-typ_fold
IPR006203	GHMP_knse_ATP-bd_CS
IPR000870	Homoserine_kinase
IPR013750	GHMP_kinase_C_dom
IPR014721	Ribosomal_S5_D2-typ_fold_subgr
IPR006204	GHMP_kinase_N_dom

Homology

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BLAST of EWM29906.1 vs. NCBI_GenBank
Match: gi|585112489|gb|EWM29906.1| (homoserine kinase [Nannochloropsis gaditana])

HSP 1 Score: 865.529 bits (2235), Expect = 0.000e+0
Identity = 422/422 (100.00%), Postives = 422/422 (100.00%), Query Frame = 0

Query:    1 MPKSMSDRAGDMLLGATFAASLGAIAFLLKLRKGNGKGTDESVKKAILEALDEARHSHPNIKLPHQHERKMQERMRLHAVEDDLHSEGPERRKVTVRVPATSANLGPGYDTIGMALDMWSEITVERADRFEIVAEGEGADDVPKDESNLVVTGMKAAFAAAKKPMPLLKYHCINRIPYARGLGSSSAAIVAGLIAGLVLAGHQLPCWGSEELLQLAACIEGHPDNVAPAIYGGIQLGIHTGERWTSERVNTPPGIQLVLFIPDFIGKTSDARGVLDSKVERKDAVYNIGRVAWLVNALSTSNLDNLRFGVEDALHQPQRGKAVYKHLYPLIEAANAAGANGCFLSGAGPTVMAITSGASGDIFAQRLSERVDWTVAEAMVRTAEAVGVKGQVYITSPAEHGAQVVSAEPAFSSKVVRFKGDV 422
            MPKSMSDRAGDMLLGATFAASLGAIAFLLKLRKGNGKGTDESVKKAILEALDEARHSHPNIKLPHQHERKMQERMRLHAVEDDLHSEGPERRKVTVRVPATSANLGPGYDTIGMALDMWSEITVERADRFEIVAEGEGADDVPKDESNLVVTGMKAAFAAAKKPMPLLKYHCINRIPYARGLGSSSAAIVAGLIAGLVLAGHQLPCWGSEELLQLAACIEGHPDNVAPAIYGGIQLGIHTGERWTSERVNTPPGIQLVLFIPDFIGKTSDARGVLDSKVERKDAVYNIGRVAWLVNALSTSNLDNLRFGVEDALHQPQRGKAVYKHLYPLIEAANAAGANGCFLSGAGPTVMAITSGASGDIFAQRLSERVDWTVAEAMVRTAEAVGVKGQVYITSPAEHGAQVVSAEPAFSSKVVRFKGDV
Sbjct:    1 MPKSMSDRAGDMLLGATFAASLGAIAFLLKLRKGNGKGTDESVKKAILEALDEARHSHPNIKLPHQHERKMQERMRLHAVEDDLHSEGPERRKVTVRVPATSANLGPGYDTIGMALDMWSEITVERADRFEIVAEGEGADDVPKDESNLVVTGMKAAFAAAKKPMPLLKYHCINRIPYARGLGSSSAAIVAGLIAGLVLAGHQLPCWGSEELLQLAACIEGHPDNVAPAIYGGIQLGIHTGERWTSERVNTPPGIQLVLFIPDFIGKTSDARGVLDSKVERKDAVYNIGRVAWLVNALSTSNLDNLRFGVEDALHQPQRGKAVYKHLYPLIEAANAAGANGCFLSGAGPTVMAITSGASGDIFAQRLSERVDWTVAEAMVRTAEAVGVKGQVYITSPAEHGAQVVSAEPAFSSKVVRFKGDV 422

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BLAST of EWM29906.1 vs. NCBI_GenBank
Match: gi|1210528268|dbj|GAX12957.1| (homoserine kinase [Fistulifera solaris])

HSP 1 Score: 482.641 bits (1241), Expect = 3.752e-166
Identity = 233/360 (64.72%), Postives = 289/360 (80.28%), Query Frame = 0

Query:   63 LPHQHERKMQERMRLHAVEDDLHSEGPERRKVTVRVPATSANLGPGYDTIGMALDMWSEITVERADRFEIVAEGEGADDVPKDESNLVVTGMKAAFAAAKKPMPLLKYHCINRIPYARGLGSSSAAIVAGLIAGLVLAGHQLPCWGSEELLQLAACIEGHPDNVAPAIYGGIQLGIHTGERWTSERVNTPPGIQLVLFIPDFIGKTSDARGVLDSKVERKDAVYNIGRVAWLVNALSTSNLDNLRFGVEDALHQPQRGKAVYKHLYPLIEAANAAGANGCFLSGAGPTVMAITSGASGDIFAQRLSERVDWTVAEAMVRTAEAVGVKGQVYITSPAEHGAQVVSAEPAFSSKVVRFKGDV 422
             PH HE +M+ ++    V ++ ++    R  VTVRVPATSAN+GPGYDTIGMA+D+WSE+TV R+D+F+I  EG+GA+++PKDESN +V G KAAF AA+KPMP+L YH ++RIP+ARGLGSSSAAIVAG+IAGL+LAGH+LPCWGSE LLQ+AA IEGHPDNVAPAIYGGIQ+GIH G RW +ERV  PPG+QLV+FIPDFIGKTSDAR VL   + R DA +NI R A+LV ALST+NLDNL++GV+D LHQPQRG  +YK+LYP+IEAA AAGA+  +LSGAGPTVMAITSGASGDIFAQR  ER D +VA AM++TAE  G+KG + +T  A  GA V    P FS++ + +  +V
Sbjct:   75 FPHNHEERMRRQIAARQVVEEENAMA--RDSVTVRVPATSANMGPGYDTIGMAVDLWSEVTVSRSDKFQITGEGDGANEMPKDESNYLVLGCKAAFEAARKPMPVLSYHVVSRIPFARGLGSSSAAIVAGIIAGLILAGHRLPCWGSEALLQIAAGIEGHPDNVAPAIYGGIQVGIHNGTRWATERVPAPPGLQLVMFIPDFIGKTSDARAVLQGGITRSDAAFNISRTAFLVLALSTNNLDNLKWGVQDKLHQPQRGGKLYKYLYPMIEAAEAAGAHCAYLSGAGPTVMAITSGASGDIFAQREKERSDSSVARAMMKTAEEFGIKGTILVTKAASEGAHVTKVVPPFSTENMIYHHNV 432

[Close]

BLAST of EWM29906.1 vs. NCBI_GenBank
Match: gi|1210525315|dbj|GAX15833.1| (homoserine kinase [Fistulifera solaris])

HSP 1 Score: 481.485 bits (1238), Expect = 8.509e-166
Identity = 233/360 (64.72%), Postives = 289/360 (80.28%), Query Frame = 0

Query:   63 LPHQHERKMQERMRLHAVEDDLHSEGPERRKVTVRVPATSANLGPGYDTIGMALDMWSEITVERADRFEIVAEGEGADDVPKDESNLVVTGMKAAFAAAKKPMPLLKYHCINRIPYARGLGSSSAAIVAGLIAGLVLAGHQLPCWGSEELLQLAACIEGHPDNVAPAIYGGIQLGIHTGERWTSERVNTPPGIQLVLFIPDFIGKTSDARGVLDSKVERKDAVYNIGRVAWLVNALSTSNLDNLRFGVEDALHQPQRGKAVYKHLYPLIEAANAAGANGCFLSGAGPTVMAITSGASGDIFAQRLSERVDWTVAEAMVRTAEAVGVKGQVYITSPAEHGAQVVSAEPAFSSKVVRFKGDV 422
             PH HE +M+ ++    V ++ ++    R  VTVRVPATSAN+GPGYDTIGMA+D+WSE+TV R+D+F+I  EG+GA+++PKDESN +V G KAAF AA+KPMP+L YH ++RIP+ARGLGSSSAAIVAG+IAGL+LAGH+LPCWGSE LLQ+AA IEGHPDNVAPAIYGGIQ+GIH G RW +ERV  PPG+QLV+FIPDFIGKTSDAR VL   + R DA +NI R A+LV ALST+NLDNL++GV+D LHQPQRG  +YK+LYP+IEAA AAGA+  +LSGAGPTVMAITSGASGDIFAQR  ER D +VA AM++TAE  G+KG + +T  A  GA V    P FS++ + +  +V
Sbjct:   75 FPHNHEERMRRQIAARQVVEEENAVA--RDSVTVRVPATSANMGPGYDTIGMAVDLWSEVTVSRSDKFQITGEGDGANEMPKDESNYLVLGCKAAFEAARKPMPVLSYHVVSRIPFARGLGSSSAAIVAGIIAGLILAGHRLPCWGSEALLQIAAGIEGHPDNVAPAIYGGIQVGIHNGTRWATERVPAPPGLQLVMFIPDFIGKTSDARAVLQGGITRSDAAFNISRTAFLVLALSTNNLDNLKWGVQDKLHQPQRGGKLYKYLYPMIEAAEAAGAHCAYLSGAGPTVMAITSGASGDIFAQREKERSDSSVARAMMKTAEEFGIKGTILVTKAASEGAHVTKVVPPFSTENMIYHHNV 432

[Close]

BLAST of EWM29906.1 vs. NCBI_GenBank
Match: gi|224003497|ref|XP_002291420.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973196|gb|EED91527.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 477.633 bits (1228), Expect = 2.341e-165
Identity = 225/360 (62.50%), Postives = 290/360 (80.56%), Query Frame = 0

Query:   63 LPHQHERKMQERMRLHAVEDDLHSEGPERRKVTVRVPATSANLGPGYDTIGMALDMWSEITVERADRFEIVAEGEGADDVPKDESNLVVTGMKAAFAAAKKPMPLLKYHCINRIPYARGLGSSSAAIVAGLIAGLVLAGHQLPCWGSEELLQLAACIEGHPDNVAPAIYGGIQLGIHTGERWTSERVNTPPGIQLVLFIPDFIGKTSDARGVLDSKVERKDAVYNIGRVAWLVNALSTSNLDNLRFGVEDALHQPQRGKAVYKHLYPLIEAANAAGANGCFLSGAGPTVMAITSGASGDIFAQRLSERVDWTVAEAMVRTAEAVGVKGQVYITSPAEHGAQVVSAEPAFSSKVVRFKGDV 422
            +PH HE +M+ R+      ++ +S+   R+ VTVRVPA+SAN GPGYD IG+A+D+W+E+T+ RA++FEI AEGEGA ++PKDESNL+VTG+KAA+  A KP+P LKYH ++RIPYARGLGSSSAAIVAG+IAGLVLAGH+LP WGSE LLQ+AA IEGHPDNVAP IYGG Q+GIH G RW +ER+ +PPG+QLV+FIPDFIGKTS ARGVL   + R DA +NIGRVA+LV+AL+  NLDNL++GV+D +HQPQR +A+YKHLYP+I+AA  AGA   +LSGAGPTVMA TSGASGDIF QR  ER D++VA+AM++ A+   VKG++ +T   + GA+VV  +P FS+  + F+ +V
Sbjct:    1 MPHSHEERMRRRIAQRMTIEEENSQ--PRQSVTVRVPASSANCGPGYDCIGLAVDLWTEVTISRAEKFEITAEGEGAAEMPKDESNLLVTGVKAAYETADKPIPPLKYHVVSRIPYARGLGSSSAAIVAGIIAGLVLAGHRLPVWGSESLLQIAASIEGHPDNVAPVIYGGFQIGIHNGTRWITERIPSPPGLQLVMFIPDFIGKTSAARGVLKDTISRTDAAFNIGRVAFLVHALAVGNLDNLKWGVQDKMHQPQRAEALYKHLYPMIKAAEEAGACCAYLSGAGPTVMAYTSGASGDIFTQREKERTDFSVAKAMMQVAQTYNVKGRIVVTQATQEGARVVKVDPPFSTADITFRDNV 358

[Close]

BLAST of EWM29906.1 vs. NCBI_GenBank
Match: gi|219120531|ref|XP_002181002.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407718|gb|EEC47654.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 478.404 bits (1230), Expect = 1.118e-164
Identity = 236/367 (64.31%), Postives = 289/367 (78.75%), Query Frame = 0

Query:   57 SHPNIKLPHQHERKMQERMRLHA-VEDDLHSEGPERRKVTVRVPATSANLGPGYDTIGMALDMWSEITVERADRFEIVAEGEGADDVPKDESNLVVTGMKAAFAAAKKPMPLLKYHCINRIPYARGLGSSSAAIVAGLIAGLVLAGHQLPCWGSEELLQLAACIEGHPDNVAPAIYGGIQLGIHTGERWTSERVNTPPGIQLVLFIPDFIGKTSDARGVLDSKVERKDAVYNIGRVAWLVNALSTSNLDNLRFGVEDALHQPQRGKAVYKHLYPLIEAANAAGANGCFLSGAGPTVMAITSGASGDIFAQRLSERVDWTVAEAMVRTAEAVGVKGQVYITSPAEHGAQVVSAEPAFSSKVVRFKGDV 422
            S  ++  PH HE +M+ ++   A VE+D       R  VTVRVPATSAN+GPGYDTIGMA+D+WSE+TVERAD FEI AEGEGA ++PKDE+N +V G KAAF AA KP+P+LKYH  +R+P+ARGLGSSSAAIVAG+IAGL+LAGH+LPCWGSE LLQ+AA IEGHPDNVAP IYGGIQ+GIH G RW +ERV  P G+QLV+FIPDFIGKTSDAR VL   + R+DA YNI RVA+LV+AL   NLDNL++GVED LHQPQRG  +YK+LYP+IEAA  AGA   +LSGAGPTVMAIT+GASGDIFAQR  ER D  VA+AM + A+  GV+GQV +T+ +  GA+VV   P FS+  + ++ ++
Sbjct:   63 SSNSVIFPHNHEERMRRQITARAAVEEDNFMP---RDSVTVRVPATSANMGPGYDTIGMAVDLWSEVTVERADTFEITAEGEGATEMPKDETNYMVIGCKAAFEAANKPLPILKYHVFSRVPFARGLGSSSAAIVAGIIAGLILAGHRLPCWGSEALLQIAAGIEGHPDNVAPVIYGGIQVGIHNGTRWVTERVPCPAGLQLVMFIPDFIGKTSDARSVLQPTISREDAAYNISRVAFLVHALCVGNLDNLKWGVEDRLHQPQRGGKLYKYLYPMIEAAENAGAACAYLSGAGPTVMAITAGASGDIFAQREKERSDLAVAKAMRQAAKEFGVQGQVVVTNVSNEGARVVKVVPPFSTGGITYRDNI 426

[Close]

BLAST of EWM29906.1 vs. NCBI_GenBank
Match: gi|1072230126|gb|OEU14860.1| (homoserine kinase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 462.611 bits (1189), Expect = 1.762e-159
Identity = 219/337 (64.99%), Postives = 269/337 (79.82%), Query Frame = 0

Query:   91 RRKVTVRVPATSANLGPGYDTIGMALDMWSEITVERADR-----FEIVAEGEGADDVPKDESNLVVTGMKAAFAAAKKPMPLLKYHCINRIPYARGLGSSSAAIVAGLIAGLVLAGHQLPCWGSEELLQLAACIEGHPDNVAPAIYGGIQLGIHTGERWTSERVNTPPGIQLVLFIPDFIGKTSDARGVLDSKVERKDAVYNIGRVAWLVNALSTSNLDNLRFGVEDALHQPQRGKAVYKHLYPLIEAANAAGANGCFLSGAGPTVMAITSGASGDIFAQRLSERVDWTVAEAMVRTAEAVGVKGQVYITSPAEHGAQVVSAEPAFSSKVVRFKGDV 422
            R  VTVRVPATSAN+GPGYD IG+A+D+WSE+TV R        FEI AEGEGAD +PKDE+N +V G KAAF  A KP+P LKYH ++RIPYARGLGSSSAAIVAG+IAGLVLAGH+LPCWGSE LLQ+AA IEGHPDNVAP IYGGIQLGIH G RW +ERV  PPG+Q+++FIPDF+GKTSDARGVL   V R+DA +NIGR A+LV+A  T+NLDNLR+G +D LHQPQRG  +YK+LYP+IEAA  AGA   +LSGAGPTVMA+TSGA+GDIFAQR  ER D  VA+AM++ A+  G+ G++ +T+    GA+VV  +P FS+  + ++ ++
Sbjct:   19 RDSVTVRVPATSANVGPGYDCIGIAVDLWSEVTVSRCPEGDEIGFEITAEGEGADAMPKDETNYLVVGCKAAFDTANKPLPPLKYHVVSRIPYARGLGSSSAAIVAGIIAGLVLAGHRLPCWGSEALLQIAAGIEGHPDNVAPVIYGGIQLGIHNGTRWLTERVANPPGLQMIIFIPDFVGKTSDARGVLQDTVSREDAAFNIGRAAFLVHAFETNNLDNLRWGAQDRLHQPQRGSKLYKYLYPMIEAAEKAGACCAYLSGAGPTVMALTSGAAGDIFAQREKERTDILVAKAMIQCAKDFGIDGKLLVTNVVSEGARVVKVDPPFSTGEITYRDNI 355

[Close]

BLAST of EWM29906.1 vs. NCBI_GenBank
Match: gi|299472057|emb|CBN80140.1| (homoserine kinase [Ectocarpus siliculosus])

HSP 1 Score: 445.662 bits (1145), Expect = 4.108e-151
Identity = 227/353 (64.31%), Postives = 281/353 (79.60%), Query Frame = 0

Query:   72 QERMRLHAVEDDLHSEGP-ERRKVTVRVPATSANLGPGYDTIGMALDMWSEITVERADRFEIVAEGEGADDVPKDESNLVVTGMKAAFAAAKKPMPLLKYHCINRIPYARGLGSSSAAIVAGLIAGLVLAGHQLPCWGSEELLQLAACIEGHPDNVAPAIYGGIQLGIHTGERWTSERVNTPPGIQLVLFIPDFIGKTSDARGVLDSKVERKDAVYNIGRVAWLVNALSTSNLDNLRFGVEDALHQPQRGKA-VYKHLYPLIEAANAAGANGCFLSGAGPTVMAITSGASGDIFAQRLSERVDWTVAEAMVRTAEAVGVKGQVYITSPAEHGAQVVSAEPAFSSKVVRFKGDV 422
            Q   R +++ +++  E   ER +V VRVPATSAN+GPG+D +GMAL +WSE+T+ER+D+FEIV EG G ++VP DE+NL+VTG KAAF AA K MP L+Y C+NRIPYARG+GSSSAAI+AGLI GLVLAGH+LP WG+EELLQLA  IEGHPDNVAP IYGG QLGIH   RW +ERV  PPGIQ+VLFIP+FIGKTSDAR VL  +V+RKDA+++IGR+AWLV AL + N++NLR G ED +HQPQR +   YKH+ P+IEAA AAGA+  +LSG+GPTV AITSGA+GDIF QR  ERVD  VAEAM++ A +V V G+ +IT+P + GA VVSAEP FS   +R+ GDV
Sbjct:  115 QRLQRTYSIREEVVREAAMERNRVVVRVPATSANMGPGFDCLGMALSIWSEVTMERSDKFEIVFEGAGFEEVPLDETNLLVTGAKAAFKAAGKAMPPLRYKCVNRIPYARGMGSSSAAILAGLIGGLVLAGHKLPMWGAEELLQLACEIEGHPDNVAPVIYGGCQLGIHNHTRWITERVQLPPGIQVVLFIPNFIGKTSDARAVLKDQVDRKDAIFSIGRIAWLVLALQSGNVNNLRAGCEDKMHQPQRARQDAYKHVNPMIEAAIAAGADTAYLSGSGPTVAAITSGAAGDIFLQRTKERVDKQVAEAMLQAAASVNVGGETFITTPTDGGAYVVSAEPKFSEGAIRYPGDV 467

[Close]

BLAST of EWM29906.1 vs. NCBI_GenBank
Match: gi|1173926860|gb|OQR80987.1| (homoserine kinase [Achlya hypogyna])

HSP 1 Score: 434.106 bits (1115), Expect = 8.069e-148
Identity = 214/341 (62.76%), Postives = 259/341 (75.95%), Query Frame = 0

Query:   83 DLHSEGPERRKVTVRVPATSANLGPGYDTIGMALDMWSEITVERADRFEIVAEGEGADDVPKDESNLVVTGMKAAFAAAKKPMPLLKYHCINRIPYARGLGSSSAAIVAGLIAGLVLAGHQLPCWGSEELLQLAACIEGHPDNVAPAIYGGIQLGIHTGERWTSERVNTPPGIQLVLFIPDFIGKTSDARGVLDSKVERKDAVYNIGRVAWLVNALSTSNLDNLRFGVEDALHQPQRGKAVYKHLYPLIEAANAAGANGCFLSGAGPTVMAITSGASGDIFAQRLSERVDWTVAEAMVRTAEAVGVKGQVYITSPAEHGAQVVSAEPAFSSKVV-RFKGDV 422
            D H+    +  VTVRVPAT+AN+GPG+D+IGMALD+W+E+TVERAD F  V EGEG+D +P DE+NLVV G+KAAF AA + MP L+  C NRIP+ARGLGSSSA IVAG+IAGLV+AGH+L  +G EELLQ+AA IEGHPDNVAP IYGG+QLGI T  RW S RV  P G+Q VLFIP+  GKTS AR +L +K++R DAVYNIGR A LVNA  + NL  LR  V+D LHQPQRG+A Y HL+PLI+AA  AGA+GCFLSGAGP+V+AITSG SGDIF Q   ER +  VA+AM   A  VGVKG V+IT+P   GA +V   P  S  +V R++GD+
Sbjct:   41 DSHTGFGPKDSVTVRVPATTANMGPGFDSIGMALDIWNELTVERADEFSFVNEGEGSDVLPTDETNLVVVGLKAAFKAAGQEMPTLRILCRNRIPFARGLGSSSAGIVAGIIAGLVIAGHELSVYGKEELLQIAAGIEGHPDNVAPCIYGGLQLGIFTDNRWYSSRVQIPDGMQCVLFIPETTGKTSTARAILPAKIDRADAVYNIGRAAILVNAFRSGNLPELRHAVQDKLHQPQRGEAQYPHLFPLIDAALEAGAHGCFLSGAGPSVLAITSGLSGDIFTQMACERAETKVADAMRDAAAKVGVKGCVFITNPEHRGAHIVKVHPKISDHLVARYEGDI 381

[Close]

BLAST of EWM29906.1 vs. NCBI_GenBank
Match: gi|1173935634|gb|OQR86727.1| (homoserine kinase [Thraustotheca clavata])

HSP 1 Score: 432.95 bits (1112), Expect = 2.580e-147
Identity = 210/336 (62.50%), Postives = 259/336 (77.08%), Query Frame = 0

Query:   88 GPERRKVTVRVPATSANLGPGYDTIGMALDMWSEITVERADRFEIVAEGEGADDVPKDESNLVVTGMKAAFAAAKKPMPLLKYHCINRIPYARGLGSSSAAIVAGLIAGLVLAGHQLPCWGSEELLQLAACIEGHPDNVAPAIYGGIQLGIHTGERWTSERVNTPPGIQLVLFIPDFIGKTSDARGVLDSKVERKDAVYNIGRVAWLVNALSTSNLDNLRFGVEDALHQPQRGKAVYKHLYPLIEAANAAGANGCFLSGAGPTVMAITSGASGDIFAQRLSERVDWTVAEAMVRTAEAVGVKGQVYITSPAEHGAQVVSAEPAFSSKVV-RFKGDV 422
            GP +  VTVRVPAT+AN+GPG+D+IGMALD+W+E+TV+R+  F    EGEG+D +P D++NLVV G+KAAF AA + MP L  HC NRIP+ARGLGSSSA IVAG+IAGLV+AGH+L   G EELLQ+AA IEGHPDNVAP IYGG+QLGIHT +RW S RV  P G+Q VLFIP+  GKTS AR +L +KV+R +AV+NIGR A LVNA  + NL  LR  V+D LHQPQRG+  Y+HLYPLI+AA  AGA+GCFLSGAGPTV+AITSG +GDIF Q  +ER +  VA+AM   A  VGVKG V+IT+P   GA +V  +P  S  +V R++GD+
Sbjct:   50 GP-KNSVTVRVPATTANMGPGFDSIGMALDIWNELTVQRSSEFSFTNEGEGSDVLPTDDTNLVVVGLKAAFDAAGQTMPPLHIHCRNRIPFARGLGSSSAGIVAGIIAGLVIAGHELSVHGKEELLQIAAGIEGHPDNVAPCIYGGLQLGIHTDDRWYSSRVQIPDGMQCVLFIPETTGKTSTARAILPAKVDRSEAVFNIGRAAILVNAFRSGNLAELRHAVQDKLHQPQRGQEQYRHLYPLIQAAQEAGAHGCFLSGAGPTVLAITSGLAGDIFTQVANERAETKVADAMRDAAAKVGVKGCVFITNPEHRGAHIVKVDPKISDHLVARYEGDI 384

[Close]

BLAST of EWM29906.1 vs. NCBI_GenBank
Match: gi|669152514|ref|XP_008611819.1| (homoserine kinase [Saprolegnia diclina VS20] >gi|530736705|gb|EQC34947.1| homoserine kinase [Saprolegnia diclina VS20])

HSP 1 Score: 431.795 bits (1109), Expect = 7.025e-147
Identity = 214/336 (63.69%), Postives = 256/336 (76.19%), Query Frame = 0

Query:   88 GPERRKVTVRVPATSANLGPGYDTIGMALDMWSEITVERADRFEIVAEGEGADDVPKDESNLVVTGMKAAFAAAKKPMPLLKYHCINRIPYARGLGSSSAAIVAGLIAGLVLAGHQLPCWGSEELLQLAACIEGHPDNVAPAIYGGIQLGIHTGERWTSERVNTPPGIQLVLFIPDFIGKTSDARGVLDSKVERKDAVYNIGRVAWLVNALSTSNLDNLRFGVEDALHQPQRGKAVYKHLYPLIEAANAAGANGCFLSGAGPTVMAITSGASGDIFAQRLSERVDWTVAEAMVRTAEAVGVKGQVYITSPAEHGAQVVSAEPAFSSKVV-RFKGDV 422
            GP +  VTVRVPAT+ANLGPG+D+IGMALD+W+E+TVERA  F    EGEGA  +P DE+NL+V G+KAAF AA +PMP L+ HC NRIP+ARGLGSSSA IVAG+IAGLV+AGH+L   G EELLQ+AA IEGHPDNVAP IYGG+QLGI T +RW S RV  P G+Q VLFIP+  GKTS AR +L  K++R DAVYNIGR A LVNA  + NL  LR  V+D LHQPQRG A Y+HL+PLI+AA  AGA+GCFLSGAGP+V+AITSG SGDIF Q   ER +  VA+AM   A  VGVKG V+IT+P   GA +V   P  S  +V R++GD+
Sbjct:   49 GP-KDSVTVRVPATTANLGPGFDSIGMALDIWNELTVERAATFSFTNEGEGAGVLPTDETNLIVVGLKAAFEAAGQPMPTLRIHCRNRIPFARGLGSSSAGIVAGIIAGLVIAGHELSVHGKEELLQIAAGIEGHPDNVAPCIYGGLQLGIFTDDRWYSSRVQIPDGMQCVLFIPETTGKTSAARAILPEKIDRSDAVYNIGRAAILVNAFQSGNLPELRHAVQDRLHQPQRGAAQYRHLFPLIDAALEAGAHGCFLSGAGPSVLAITSGLSGDIFTQVARERAETKVADAMRDAAAQVGVKGCVFITNPEHRGAHIVKVHPKISDHMVARYEGDI 383

The following BLAST results are available for this feature:

BLAST of EWM29906.1 vs. NCBI_GenBank

BLAST of EWM29906.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10


Match Name	E-value	Identity	Description
gi\|585112489\|gb\|EWM29906.1\|	0.000e+0	100.00	homoserine kinase [Nannochloropsis gaditana]	[more]
gi\|1210528268\|dbj\|GAX12957.1\|	3.752e-166	64.72	homoserine kinase [Fistulifera solaris]	[more]
gi\|1210525315\|dbj\|GAX15833.1\|	8.509e-166	64.72	homoserine kinase [Fistulifera solaris]	[more]
gi\|224003497\|ref\|XP_002291420.1\|	2.341e-165	62.50	predicted protein [Thalassiosira pseudonana CCMP13...	[more]
gi\|219120531\|ref\|XP_002181002.1\|	1.118e-164	64.31	predicted protein [Phaeodactylum tricornutum CCAP ...	[more]
gi\|1072230126\|gb\|OEU14860.1\|	1.762e-159	64.99	homoserine kinase [Fragilariopsis cylindrus CCMP11...	[more]
gi\|299472057\|emb\|CBN80140.1\|	4.108e-151	64.31	homoserine kinase [Ectocarpus siliculosus]	[more]
gi\|1173926860\|gb\|OQR80987.1\|	8.069e-148	62.76	homoserine kinase [Achlya hypogyna]	[more]
gi\|1173935634\|gb\|OQR86727.1\|	2.580e-147	62.50	homoserine kinase [Thraustotheca clavata]	[more]
gi\|669152514\|ref\|XP_008611819.1\|	7.025e-147	63.69	homoserine kinase [Saprolegnia diclina VS20] >gi\|5...	[more]

Relationships

This CDS is a part of the following mRNA feature(s):


Feature Name	Unique Name	Species	Type
rna761	rna761	Nannochloropsis gaditana (N. gaditana B-31)	mRNA

Sequences

Synonyms

Publications