EWM30597.1, cds76 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30597.1 vs. NCBI_GenBank
Match: gi|585113265|gb|EWM30597.1| (BEACH domain protein [Nannochloropsis gaditana]) HSP 1 Score: 811.216 bits (2094), Expect = 0.000e+0 Identity = 398/398 (100.00%), Postives = 398/398 (100.00%), Query Frame = 0
Query: 1 MHLNVMAGRSFNDLNQYPVFPWVLADYTSPSLDLSLPSTFRDLSKPVGALDEGRARTFWHRYQAMKLEEAEEAAEEDGTGALRIPPFMYGSHYSSAALVLHFLVRQEPFASHAVALQSGSFDCPDRLFFSLRAAWESALRSTTDVKELIPELFTTPECLQNTNRLPLGRLQDGQGRRVGDVELPPWARNAHDFVRQHRQALESEYVSSHLHEWIDLIFGWKQRGPPAEAARNVFYYLTYEGAVDVDRIDDPVLKEATEAQIRHYGQTPSQLFSQPHPPRLPLHDTVQPLGASLASLTHLRAYTPPQHLLRNLSLPAFSHCPSTFASPSGSTALPPSLPSSLPPSLPSPPVLTVLAAPNKIHVVFNDFRVASYRWSAMPDSHDFPFTVRFERLRTLPCL 398
MHLNVMAGRSFNDLNQYPVFPWVLADYTSPSLDLSLPSTFRDLSKPVGALDEGRARTFWHRYQAMKLEEAEEAAEEDGTGALRIPPFMYGSHYSSAALVLHFLVRQEPFASHAVALQSGSFDCPDRLFFSLRAAWESALRSTTDVKELIPELFTTPECLQNTNRLPLGRLQDGQGRRVGDVELPPWARNAHDFVRQHRQALESEYVSSHLHEWIDLIFGWKQRGPPAEAARNVFYYLTYEGAVDVDRIDDPVLKEATEAQIRHYGQTPSQLFSQPHPPRLPLHDTVQPLGASLASLTHLRAYTPPQHLLRNLSLPAFSHCPSTFASPSGSTALPPSLPSSLPPSLPSPPVLTVLAAPNKIHVVFNDFRVASYRWSAMPDSHDFPFTVRFERLRTLPCL
Sbjct: 1 MHLNVMAGRSFNDLNQYPVFPWVLADYTSPSLDLSLPSTFRDLSKPVGALDEGRARTFWHRYQAMKLEEAEEAAEEDGTGALRIPPFMYGSHYSSAALVLHFLVRQEPFASHAVALQSGSFDCPDRLFFSLRAAWESALRSTTDVKELIPELFTTPECLQNTNRLPLGRLQDGQGRRVGDVELPPWARNAHDFVRQHRQALESEYVSSHLHEWIDLIFGWKQRGPPAEAARNVFYYLTYEGAVDVDRIDDPVLKEATEAQIRHYGQTPSQLFSQPHPPRLPLHDTVQPLGASLASLTHLRAYTPPQHLLRNLSLPAFSHCPSTFASPSGSTALPPSLPSSLPPSLPSPPVLTVLAAPNKIHVVFNDFRVASYRWSAMPDSHDFPFTVRFERLRTLPCL 398
BLAST of EWM30597.1 vs. NCBI_GenBank
Match: gi|224009041|ref|XP_002293479.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220970879|gb|EED89215.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 327.02 bits (837), Expect = 5.877e-107 Identity = 162/309 (52.43%), Postives = 209/309 (67.64%), Query Frame = 0
Query: 1 MHLNVMAGRSFNDLNQYPVFPWVLADYTSPSLDLSLPSTFRDLSKPVGALDEGRARTFWHRYQAMKLEEAEEAAEEDGTGALRIPPFMYGSHYSSAALVLHFLVRQEPFASHAVALQSGSFDCPDRLFFSLRAAWESALRSTTDVKELIPELFTTPECLQNTNRLPLGRLQDGQGRRVGDVELPPWAR-NAHDFVRQHRQALESEYVSSHLHEWIDLIFGWKQRGPPAEAARNVFYYLTYEGAVDVDRIDDPVLKEATEAQIRHYGQTPSQLFSQPHPPRLPLHDTVQPLGASLASLTHLRAYTPPQHL 308
M LN+MAGR+FND+ QYPVFPW+++DYTS +LDL+ + +RDLSKPVGAL+E R RY + EE F+YGSHYSS +VLH+++RQEPF S +ALQSG FDCPDRLFF + W S L ST+DVKELIPE FT PE NTNR PLG Q+ Q V +V LPPW+ +AH+F+R R ALES+YVS++LH WIDLIFG+KQRGP + A NVF+YL+YEG+VD+D+I D + ++A E I+++GQTPSQL ++ HP R D SL L+ +TP +
Sbjct: 1 MALNLMAGRTFNDITQYPVFPWIISDYTSETLDLTDHNIYRDLSKPVGALNEDRLAMLIERYNELDGFPEEER-------------FLYGSHYSSPGVVLHYMLRQEPFTSMHIALQSGRFDCPDRLFFDVGGCWRSCLSSTSDVKELIPEFFTCPEIFLNTNRFPLGETQNKQ--PVDNVILPPWSNGSAHEFIRIQRLALESDYVSNNLHHWIDLIFGYKQRGPASSLAHNVFHYLSYEGSVDIDKITDEIQRKAIEGHIQNFGQTPSQLIAKEHPSRSRADDVFGLFSKSLG-YDRLQCHTPSKQF 293
BLAST of EWM30597.1 vs. NCBI_GenBank
Match: gi|307205116|gb|EFN83581.1| (Neurobeachin [Harpegnathos saltator]) HSP 1 Score: 327.791 bits (839), Expect = 2.735e-106 Identity = 160/279 (57.35%), Postives = 202/279 (72.40%), Query Frame = 0
Query: 1 MHLNVMAGRSFNDLNQYPVFPWVLADYTSPSLDLSLPSTFRDLSKPVGALDEGRARTFWHRYQAMKLEEAEEAAEEDGTGALRIPPFMYGSHYSSAALVLHFLVRQEPFASHAVALQSGSFDCPDRLFFSLRAAWESALRSTTDVKELIPELFTTPECLQNTNRLPLGRLQDGQGRRVGDVELPPWARNAHDFVRQHRQALESEYVSSHLHEWIDLIFGWKQRGPPAEAARNVFYYLTYEGAVDVDRIDDPVLKEATEAQIRHYGQTPSQLFSQPHPPR 279
M LN +AGR++NDLNQYPVFPWVL +Y + LDLSLPS +RDLSKP+GAL+ R F R+Q E D IPPF YG+HYS+AA VL++++R EP + +ALQ G FD P+RLF S+ +W++ R T+DVKELIPE F PE L N+NR LGR +DG VGDVELPPWA + +F+R +R ALESE+VS LH+WIDLIFG+KQ+GP A A NVFYYLTYEG+V++D I DP++KEA E QI+++GQTPSQL +PHPPR
Sbjct: 28 MFLNTIAGRTYNDLNQYPVFPWVLTNYETKELDLSLPSNYRDLSKPIGALNPNRRIYFEERFQGW---------EHDT-----IPPFHYGTHYSTAAFVLNWMIRVEPMTTMFLALQGGKFDHPNRLFSSIALSWKNCQRDTSDVKELIPEFFFLPEMLVNSNRYHLGRQEDGS--VVGDVELPPWASSPEEFIRINRMALESEFVSCQLHQWIDLIFGYKQKGPEAIRATNVFYYLTYEGSVELDTIIDPMIKEAIENQIKNFGQTPSQLLMEPHPPR 290
BLAST of EWM30597.1 vs. NCBI_GenBank
Match: gi|1072234212|gb|OEU18942.1| (beach-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 328.561 bits (841), Expect = 2.968e-106 Identity = 163/301 (54.15%), Postives = 214/301 (71.10%), Query Frame = 0
Query: 1 MHLNVMAGRSFNDLNQYPVFPWVLADYTSPSLDLSLPSTFRDLSKPVGALDEGRARTFWHRYQAMKLEEAEEAAEEDGTGALRIPP---FMYGSHYSSAALVLHFLVRQEPFASHAVALQSGSFDCPDRLFFSLRAAWESALRSTTDVKELIPELFTTPECLQNTNRLPLGRLQDGQGRRVGDVELPPWAR-NAHDFVRQHRQALESEYVSSHLHEWIDLIFGWKQRGPPAEAARNVFYYLTYEGAVDVDRIDDPVLKEATEAQIRHYGQTPSQL-FSQPHPPRLPLHDTVQPLGASLASL 296
M LN MAGR+FND++QYPVFPW+LADY S +DLS ++RDLSKPVGAL+ R RYQ ++ + PP F+YGSHYSS L+LHFL+RQEPF S A+ LQSG FDCPDRLFF L+ +W+S S++DVKELIPE FT PE L N N P G+ Q +G V DV+LPPWA+ +AH+FVR HR ALESEYVS +L WIDL+FG+KQRG AE A N+F++L+YEG+VD+D+I+D + ++A E+QI+++GQTPSQL PHP R L + +PL +++++
Sbjct: 136 MALNRMAGRTFNDISQYPVFPWILADYQSEKVDLSDSRSYRDLSKPVGALNPSRLAMLLERYQELE--------------SFGFPPEEKFLYGSHYSSPGLILHFLIRQEPFTSMAIDLQSGKFDCPDRLFFDLKESWKSCNTSSSDVKELIPEFFTMPEMLLNLNNFPFGKTQ--KGISVNDVDLPPWAKGSAHEFVRIHRLALESEYVSCNLQNWIDLVFGYKQRGLEAEKAWNIFHHLSYEGSVDLDKINDDIDRKAAESQIQNFGQTPSQLILKNPHPSRYGLEISWRPLIFNVSAM 420
BLAST of EWM30597.1 vs. NCBI_GenBank
Match: gi|298705738|emb|CBJ49046.1| (similar to LPS-responsive vesicle trafficking, beach and anchor containing isoform 5 [Ectocarpus siliculosus]) HSP 1 Score: 348.977 bits (894), Expect = 1.527e-104 Identity = 188/389 (48.33%), Postives = 241/389 (61.95%), Query Frame = 0
Query: 1 MHLNVMAGRSFNDLNQYPVFPWVLADYTSPSLDLSLPSTFRDLSKPVGALDEGRARTFWHRYQAMKLEEAEEAAEEDGTGALRIPPFMYGSHYSSAALVLHFLVRQEPFASHAVALQSGSFDCPDRLFFSLRAAWESALRSTT--DVKELIPELFTTPECLQNTNRLPLGRLQDGQGRRVGDVELPPWARNAHDFVRQHRQALESEYVSSHLHEWIDLIFGWKQRGPPAEAARNVFYYLTYEGAVDVDRIDDPVLKEATEAQIRHYGQTPSQLFSQPHPPRLPLHDTVQPLGASLASLTHLRAYTPPQHLLRNLSLPAFSHCPSTFASPSGSTALPPSLPSSLPPSLPSPPVLTVLAAPNKIHVVFNDFRVASYRWSAMPDSHDFPFTV 387
M LNV+AGRS+ND++QYPVFPWVLADYTS LDL+ P++FRDLSKP+GA +E R + F RY A+ ED T +P FMYG+HYSSA +VLH+LVRQEPF + + LQ G FDCPDRLF L +W+ +T DVKEL PE F PE N N+LPLG +Q G+ V DVELPPWA++A DFVR HR ALESE VS +LH WIDL+FG++QRG A A NVFYYLTYEGAVD+ ++D +EA EAQIRH+GQTPSQ+ +PHP RLP + V P+ + ++L LR ++ +G+ P +L +++V AA RV ++ WS +PD PFT+
Sbjct: 1198 MELNVIAGRSYNDISQYPVFPWVLADYTSTELDLNNPASFRDLSKPMGAQNERRRQLFLERY----------ASFEDET----VPKFMYGTHYSSAGVVLHYLVRQEPFTTLHINLQGGRFDCPDRLFADLGQSWKGCTDESTMSDVKELTPEFFYCPEIFLNANKLPLGEMQ-GEKGAVDDVELPPWAKDAFDFVRIHRLALESEQVSRNLHRWIDLVFGYQQRGDQAVKAANVFYYLTYEGAVDLSLVNDDRQREAMEAQIRHFGQTPSQVLKEPHPIRLPPEECVLPIFSPTSTLASLRVFS------------------------AGNRPHDPGRGGALLVYCTKDRLVSVDAA----------LRVTTWTWSGVPDGFGLPFTL 1537
BLAST of EWM30597.1 vs. NCBI_GenBank
Match: gi|915664012|gb|KOC66214.1| (Neurobeachin [Habropoda laboriosa]) HSP 1 Score: 333.569 bits (854), Expect = 2.517e-104 Identity = 179/362 (49.45%), Postives = 226/362 (62.43%), Query Frame = 0
Query: 1 MHLNVMAGRSFNDLNQYPVFPWVLADYTSPSLDLSLPSTFRDLSKPVGALDEGRARTFWHRYQAMKLEEAEEAAEEDGTGALRIPPFMYGSHYSSAALVLHFLVRQEPFASHAVALQSGSFDCPDRLFFSLRAAWESALRSTTDVKELIPELFTTPECLQNTNRLPLGRLQDGQGRRVGDVELPPWARNAHDFVRQHRQALESEYVSSHLHEWIDLIFGWKQRGPPAEAARNVFYYLTYEGAVDVDRIDDPVLKEATEAQIRHYGQTPSQLFSQPHPPRLPLHDTVQPLGASLASLTHLRAYTPPQHLLRNLSLPAFSHCPSTFASPSGSTALPPSLPSSLP---------PSLPSPPVLTV 353
M LN +AGR++NDLNQYPVFPWVL +Y + LDLSLPS +RDLSKP+GAL+ R F R+Q+ E D IPPF YG+HYS+AA VL++++R EP + +ALQ G FD P+RLF S+ +W++ R T+DVKELIPE F PE L N+NR LGR +DG VGDVELPPWA + +F+R +R ALESE+VS LH+W DLIFG+KQ+GP A A NVFYYLTYEG+VD+D I DPV++EA E QIR++GQTPSQL +PHPPR +S H L+LP P F+S + PS+ P P LP P V+TV
Sbjct: 91 MFLNTIAGRTYNDLNQYPVFPWVLTNYETKELDLSLPSNYRDLSKPIGALNPSRRAYFEERFQSW---------EHDS-----IPPFHYGTHYSTAAFVLNWMIRVEPMTTMFLALQGGKFDHPNRLFSSIALSWKNCQRDTSDVKELIPEFFFLPEMLVNSNRYRLGRQEDGS--VVGDVELPPWASSPEEFIRINRMALESEFVSCQLHQWTDLIFGYKQKGPEAVRATNVFYYLTYEGSVDLDTITDPVMREAIENQIRNFGQTPSQLLMEPHPPR--------------SSAMH-------------LTLPPVLQSPMMFSSIPDDVCMTIKFPSNSPICHISANTYPQLPLPSVVTV 409
BLAST of EWM30597.1 vs. NCBI_GenBank
Match: gi|1016171339|gb|KZC14375.1| (Neurobeachin, partial [Dufourea novaeangliae]) HSP 1 Score: 333.954 bits (855), Expect = 2.599e-104 Identity = 162/279 (58.06%), Postives = 201/279 (72.04%), Query Frame = 0
Query: 1 MHLNVMAGRSFNDLNQYPVFPWVLADYTSPSLDLSLPSTFRDLSKPVGALDEGRARTFWHRYQAMKLEEAEEAAEEDGTGALRIPPFMYGSHYSSAALVLHFLVRQEPFASHAVALQSGSFDCPDRLFFSLRAAWESALRSTTDVKELIPELFTTPECLQNTNRLPLGRLQDGQGRRVGDVELPPWARNAHDFVRQHRQALESEYVSSHLHEWIDLIFGWKQRGPPAEAARNVFYYLTYEGAVDVDRIDDPVLKEATEAQIRHYGQTPSQLFSQPHPPR 279
M LN +AGR++NDLNQYPVFPWVL +Y + LDLSLPS +RDLSKP+GAL+ R F R+Q+ E D IPPF YG+HYS+AA VLH+++R EP + +ALQ G FD P+RLF S+ +W++ R T+DVKELIPE F PE L N NR LGR +DG VGDVELPPWA + +F+R +R ALESE+VS LH+WIDLIFG+KQ+GP A A NVFYYLTYEG+VD+D I DPV+++A E QIR +GQTPSQL +PHPPR
Sbjct: 107 MFLNTIAGRTYNDLNQYPVFPWVLTNYETKELDLSLPSNYRDLSKPIGALNPSRRAYFEERFQSW---------EHDS-----IPPFHYGTHYSTAAFVLHWMIRVEPMTTMFLALQGGKFDYPNRLFSSIALSWKNCQRDTSDVKELIPEFFFLPEMLVNNNRYRLGRQEDGSA--VGDVELPPWASSPEEFIRINRMALESEFVSCQLHQWIDLIFGYKQKGPEAVRATNVFYYLTYEGSVDLDTITDPVMRDAIENQIRSFGQTPSQLLMEPHPPR 369
BLAST of EWM30597.1 vs. NCBI_GenBank
Match: gi|332025325|gb|EGI65493.1| (Neurobeachin [Acromyrmex echinatior]) HSP 1 Score: 330.487 bits (846), Expect = 3.733e-103 Identity = 160/279 (57.35%), Postives = 202/279 (72.40%), Query Frame = 0
Query: 1 MHLNVMAGRSFNDLNQYPVFPWVLADYTSPSLDLSLPSTFRDLSKPVGALDEGRARTFWHRYQAMKLEEAEEAAEEDGTGALRIPPFMYGSHYSSAALVLHFLVRQEPFASHAVALQSGSFDCPDRLFFSLRAAWESALRSTTDVKELIPELFTTPECLQNTNRLPLGRLQDGQGRRVGDVELPPWARNAHDFVRQHRQALESEYVSSHLHEWIDLIFGWKQRGPPAEAARNVFYYLTYEGAVDVDRIDDPVLKEATEAQIRHYGQTPSQLFSQPHPPR 279
M LN +AGR++NDLNQYPVFPWVL +Y + LDLSLPS +RDLSKP+GAL+ R F R+Q+ E D IPPF YG+HYS+AA VL++++R EP + +ALQ G FD P+RLF S+ +W++ R T+DVKELIPE F PE L N+NR LGR +DG VGDVELPPWA + +F+R +R ALESE+VS LH+WIDLIFG+KQ+GP A A NVFYYLTYEG V++D I DP+++EA E QIR++GQTPSQL +PHPPR
Sbjct: 87 MFLNTIAGRTYNDLNQYPVFPWVLTNYETKELDLSLPSNYRDLSKPIGALNPNRRAYFEERFQSW---------EHD-----TIPPFHYGTHYSTAAFVLNWMIRVEPMTTMFLALQGGKFDHPNRLFSSIALSWKNCQRDTSDVKELIPEFFFLPEMLVNSNRYRLGRQEDGSS--VGDVELPPWASSPEEFIRINRMALESEFVSCQLHQWIDLIFGYKQKGPEAVRATNVFYYLTYEGTVELDTITDPMIREAIENQIRNFGQTPSQLLMEPHPPR 349
BLAST of EWM30597.1 vs. NCBI_GenBank
Match: gi|646682666|gb|KDR02350.1| (Neurobeachin [Zootermopsis nevadensis]) HSP 1 Score: 328.561 bits (841), Expect = 1.016e-102 Identity = 162/279 (58.06%), Postives = 197/279 (70.61%), Query Frame = 0
Query: 1 MHLNVMAGRSFNDLNQYPVFPWVLADYTSPSLDLSLPSTFRDLSKPVGALDEGRARTFWHRYQAMKLEEAEEAAEEDGTGALRIPPFMYGSHYSSAALVLHFLVRQEPFASHAVALQSGSFDCPDRLFFSLRAAWESALRSTTDVKELIPELFTTPECLQNTNRLPLGRLQDGQGRRVGDVELPPWARNAHDFVRQHRQALESEYVSSHLHEWIDLIFGWKQRGPPAEAARNVFYYLTYEGAVDVDRIDDPVLKEATEAQIRHYGQTPSQLFSQPHPPR 279
M LN +AGR++NDLNQYPVFPWVL +Y + LDLSLPS +RDLSKP+GAL+ R F RY E D I PF YG+HYS+AA VL++L+R EP + +ALQ G FD P+RLF S+ +W++ R T+DVKELIPE F PE L N NR LG+ +DG + DVELPPWA + +FVR +R ALESE+VS LH+WIDLIFG+KQRGP A A NVFYYLTYEG VD+D I DPV+KEA E QIR++GQTPSQL +PHPPR
Sbjct: 64 MFLNTIAGRTYNDLNQYPVFPWVLTNYETRELDLSLPSNYRDLSKPIGALNPSRRAYFEERYNTW---------EHDS-----ISPFHYGTHYSTAAFVLNWLIRVEPMTTMFLALQGGKFDHPNRLFSSIALSWKNCQRDTSDVKELIPEFFFLPEMLVNANRYRLGQQEDGSA--ISDVELPPWASSPEEFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAVRATNVFYYLTYEGCVDMDNISDPVMKEAIENQIRNFGQTPSQLLMEPHPPR 326
BLAST of EWM30597.1 vs. NCBI_GenBank
Match: gi|951520159|ref|XP_014479889.1| (PREDICTED: neurobeachin-like [Dinoponera quadriceps]) HSP 1 Score: 330.102 bits (845), Expect = 1.042e-102 Identity = 160/279 (57.35%), Postives = 203/279 (72.76%), Query Frame = 0
Query: 1 MHLNVMAGRSFNDLNQYPVFPWVLADYTSPSLDLSLPSTFRDLSKPVGALDEGRARTFWHRYQAMKLEEAEEAAEEDGTGALRIPPFMYGSHYSSAALVLHFLVRQEPFASHAVALQSGSFDCPDRLFFSLRAAWESALRSTTDVKELIPELFTTPECLQNTNRLPLGRLQDGQGRRVGDVELPPWARNAHDFVRQHRQALESEYVSSHLHEWIDLIFGWKQRGPPAEAARNVFYYLTYEGAVDVDRIDDPVLKEATEAQIRHYGQTPSQLFSQPHPPR 279
M LN +AGR++NDLNQYPVFPWVL +Y + LDLSLPS +RDLSKP+GAL+ R F R+Q+ E D IPPF YG+HYS+AA VL++++R EP + +ALQ G FD P+RLF S+ +W++ R T+DVKELIPE F PE L N+NR LGR +DG VGDVELPPWA + +F+R +R ALESE+VS LH+WIDLIFG+KQ+GP A A NVFYYLTYEG+V++D I DP++KEA E QI+++GQTPSQL +PHPPR
Sbjct: 119 MFLNTIAGRTYNDLNQYPVFPWVLTNYETKELDLSLPSNYRDLSKPIGALNPNRRVYFEERFQSW---------EHD-----TIPPFHYGTHYSTAAFVLNWMIRVEPMTTMFLALQGGKFDHPNRLFSSIALSWKNCQRDTSDVKELIPEFFFLPEMLVNSNRYHLGRQEDGS--VVGDVELPPWASSPEEFIRINRMALESEFVSCQLHQWIDLIFGYKQKGPEAVRATNVFYYLTYEGSVELDTITDPMIKEAIENQIKNFGQTPSQLLMEPHPPR 381 The following BLAST results are available for this feature:
BLAST of EWM30597.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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