EWM23098.1, cds7578 (CDS) Nannochloropsis gaditana

Overview
NameEWM23098.1
Unique Namecds7578
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:339090..339506 +
Alignment locationCM002472.1:339755..340138 +
Alignment locationCM002472.1:340242..340304 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23098.1
Productabc transporter b family protein
Orig transcript idgnl|cribi|Naga_100334g5.8497.mrna
GeneabcB3
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:339090..339506 +
CM002472.1supercontigCM002472.1:339755..340138 +
CM002472.1supercontigCM002472.1:340242..340304 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0000166nucleotide binding
GO:0042626ATPase activity, coupled to transmembrane movement of substances
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR011527ABC1_TM_dom
Homology
BLAST of EWM23098.1 vs. NCBI_GenBank
Match: gi|585103960|gb|EWM23098.1| (abc transporter b family protein [Nannochloropsis gaditana])

HSP 1 Score: 571.622 bits (1472), Expect = 0.000e+0
Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0
Query:    1 MAVSNAAVLPSAGDAKDKDALTASTPAPPAPKVELVPFSDLFYFADGLDWFCMFLGTLSACATGVAMPVFMIIFGSILDEIGTGQGSFKDTINQLALAMSALGAGTFLVSAFQVAFFAYASARQTERLRATLLRSILRQEIGWFDTNNGGELATVLSEATSAFQEGTGRRVSEGVQALAQFLAGLIIAFTQSWRLSLVLLAGLPLIGGAAVALSSVMSEAKAATSAQYAKAGGVANEALGAIRTVASLGAERKFMEAYNRLIEEAERWRTICPVSWRGEPGASRAGL 287
            MAVSNAAVLPSAGDAKDKDALTASTPAPPAPKVELVPFSDLFYFADGLDWFCMFLGTLSACATGVAMPVFMIIFGSILDEIGTGQGSFKDTINQLALAMSALGAGTFLVSAFQVAFFAYASARQTERLRATLLRSILRQEIGWFDTNNGGELATVLSEATSAFQEGTGRRVSEGVQALAQFLAGLIIAFTQSWRLSLVLLAGLPLIGGAAVALSSVMSEAKAATSAQYAKAGGVANEALGAIRTVASLGAERKFMEAYNRLIEEAERWRTICPVSWRGEPGASRAGL
Sbjct:    1 MAVSNAAVLPSAGDAKDKDALTASTPAPPAPKVELVPFSDLFYFADGLDWFCMFLGTLSACATGVAMPVFMIIFGSILDEIGTGQGSFKDTINQLALAMSALGAGTFLVSAFQVAFFAYASARQTERLRATLLRSILRQEIGWFDTNNGGELATVLSEATSAFQEGTGRRVSEGVQALAQFLAGLIIAFTQSWRLSLVLLAGLPLIGGAAVALSSVMSEAKAATSAQYAKAGGVANEALGAIRTVASLGAERKFMEAYNRLIEEAERWRTICPVSWRGEPGASRAGL 287          
BLAST of EWM23098.1 vs. NCBI_GenBank
Match: gi|553194387|ref|XP_005855944.1| (atp-binding cassette transporter [Nannochloropsis gaditana CCMP526] >gi|422293117|gb|EKU20417.1| atp-binding cassette transporter [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 281.567 bits (719), Expect = 1.872e-93
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0
Query:    1 MAVSNAAVLPSAGDAKDKDALTASTPAPPAPKVELVPFSDLFYFADGLDWFCMFLGTLSACATGVAMPVFMIIFGSILDEIGTGQGSFKDTINQLALAMSALGAGTFLVSAFQVAFFAYASARQTERLRATLLRSILRQ 139
            MAVSNAAVLPSAGDAKDKDALTASTPAPPAPKVELVPFSDLFYFADGLDWFCMFLGTLSACATGVAMPVFMIIFGSILDEIGTGQGSFKDTINQLALAMSALGAGTFLVSAFQVAFFAYASARQTERLRATLLRSILRQ
Sbjct:    3 MAVSNAAVLPSAGDAKDKDALTASTPAPPAPKVELVPFSDLFYFADGLDWFCMFLGTLSACATGVAMPVFMIIFGSILDEIGTGQGSFKDTINQLALAMSALGAGTFLVSAFQVAFFAYASARQTERLRATLLRSILRQ 141          
BLAST of EWM23098.1 vs. NCBI_GenBank
Match: gi|669137100|ref|XP_008604118.1| (hypothetical protein SDRG_00422 [Saprolegnia diclina VS20] >gi|530744453|gb|EQC42695.1| hypothetical protein SDRG_00422 [Saprolegnia diclina VS20])

HSP 1 Score: 168.703 bits (426), Expect = 1.596e-46
Identity = 93/255 (36.47%), Postives = 146/255 (57.25%), Query Frame = 0
Query:   16 KDKDALTASTPAPPAPKVELVPFSDLFYFADGLDWFCMFLGTLSACATGVAMPVFMIIFGSILDEIG----TGQGSFKDTINQLALAMSALGAGTFLVSAFQVAFFAYASARQTERLRATLLRSILRQEIGWFDTNNGGELATVLSEATSAFQEGTGRRVSEGVQALAQFLAGLIIAFTQSWRLSLVLLAGLPLIGGAAVALSSVMSEAKAATSAQYAKAGGVANEALGAIRTVASLGAERKFMEAYNRLIEEAE 266
            K+ +A  + TP   AP   +V F+ LF FAD  D   + LGTLS+   GVA P+ ++ FG++++       TG  +F+D+IN+  +  + +GA   +  A Q+A +  A+ARQT+RLR     +ILRQE+GWFD N   +LAT +++ T   QEG GR+V++ +  +   L G+++ F   W L+LVLLA  P + G+   +   ++ A       YA+AGGVA EAL  IRT+ +  A    ++ Y   + + E
Sbjct:   16 KNNEAPPSETPTNTAP---MVSFAKLFSFADTTDKVLLALGTLSSMVLGVAQPLQIVFFGNVVNAFNPTSATGADAFRDSINRTVIQFAIMGAVVLVTGATQIACWNIAAARQTKRLRHAYATAILRQEVGWFDVNEPMQLATRVADTTLIIQEGMGRKVADAINFMTMGLTGIVVGFVYGWDLTLVLLALSPFVAGSGYYMVKTIAAATQGGVEAYAEAGGVAEEALSNIRTIHAFNAMPTVVKNYMAALRKTE 267          
BLAST of EWM23098.1 vs. NCBI_GenBank
Match: gi|973139745|ref|XP_015213560.1| (PREDICTED: multidrug resistance protein 1 [Lepisosteus oculatus] >gi|973139747|ref|XP_015213561.1| PREDICTED: multidrug resistance protein 1 [Lepisosteus oculatus])

HSP 1 Score: 177.178 bits (448), Expect = 1.979e-46
Identity = 103/279 (36.92%), Postives = 150/279 (53.76%), Query Frame = 0
Query:    3 VSNAAVLPSAGDAKDKDALTASTPAPPAPKVELVPFSDLFYFADGLDWFCMFLGTLSACATGVAMPVFMIIFGSILDEI------GTGQGSFKDTINQ--------LALAMSALGAGTFLVSAFQVAFFAYASARQTERLRATLLRSILRQEIGWFDTNNGGELATVLSEATSAFQEGTGRRVSEGVQALAQFLAGLIIAFTQSWRLSLVLLAGLPLIGGAAVALSSVMSEAKAATSAQYAKAGGVANEALGAIRTVASLGAERKFMEAYNRLIEEAER 267
            ++N A   S  D K+ D ++ S     APK+E+V    LF FADG D   M +GTL A   G  +P   +IFG + D             +F    N+         A+  SALGAG  L +  Q+A +  A+ RQ +RLR     +I+RQEIGWFD N  G+L T L++      EG G +V+  +Q++  F+AG I+ F   W+L+LV+LA  PL+G +A   S VM+   +     YAKAG VA E L AIRTV + G ++K +  Y++ + +A+ 
Sbjct:    9 MNNLATEISEND-KNGD-ISKSKEEQKAPKIEMVSPLTLFRFADGTDVLLMLMGTLMAMTNGSVLPAMCVIFGDMTDSFVSDSMANVPNSNFTPATNETLGEQLTRYAIYYSALGAGVLLAAYLQIACWTIAAGRQVKRLRKRFFHAIVRQEIGWFDMNETGQLNTRLTDDIYKVNEGIGDKVALLIQSVTTFIAGFIVGFITGWKLTLVILAVSPLLGISAALFSKVMTSFTSKEQTAYAKAGAVAEEVLSAIRTVIAFGGQKKEINRYHKNLIDAKN 285          

HSP 2 Score: 97.4413 bits (241), Expect = 5.420e-19
Identity = 68/213 (31.92%), Postives = 102/213 (47.89%), Query Frame = 0
Query:   49 DWFCMFLGTLSACATGVAMPVFMIIFGSILDEIG-TGQGSFKDTINQLALAMSALGAGTFLVSAFQVAFFAYASARQTERLRATLLRSILRQEIGWFD--TNNGGELATVLSEATSAFQEGTGRRVSEGVQALAQFLAGLIIAFTQSWRLSLVLLAGLPLIGGAAVALSSVMSEAKAATSAQYAKAGGVANEALGAIRTVASLGAERKFMEAY 258
            +W  + +G L A   G   P F +IF  I+       +   ++      L    +G  +F    FQ   F  A    T RLR    +++LRQ++GWFD   N+ G L T L+   +  Q  TG R++   Q +A     +IIAF   W+L+L++LA +PL+  A      +++   A    +   AG +A EA+  IRTV SL  ERKF   Y
Sbjct:  701 EWPYIVVGILCAIVNGGLQPAFAVIFSKIIAVFAEVNEEVIRERSTLFCLMFVVIGVVSFFTLFFQGYSFGKAGEILTMRLRLMAFKAMLRQDLGWFDDSKNSVGALTTRLATDAAQVQGATGVRMATLAQNVANLGTSVIIAFVYGWQLTLLILAIVPLMVIAGTIEIKMLAGHAAKDKKELEAAGKIATEAIENIRTVVSLTRERKFEALY 913          
BLAST of EWM23098.1 vs. NCBI_GenBank
Match: gi|302768767|ref|XP_002967803.1| (ATP-binding cassette transporter [Selaginella moellendorffii] >gi|300164541|gb|EFJ31150.1| ATP-binding cassette transporter [Selaginella moellendorffii])

HSP 1 Score: 175.637 bits (444), Expect = 5.840e-46
Identity = 93/231 (40.26%), Postives = 136/231 (58.87%), Query Frame = 0
Query:   36 VPFSDLFYFADGLDWFCMFLGTLSACATGVAMPVFMIIFGSILDEIGTGQGSFKDTINQLALAMSALGAGTFLVSAFQVAFFAYASARQTERLRATLLRSILRQEIGWFDTN-NGGELATVLSEATSAFQEGTGRRVSEGVQALAQFLAGLIIAFTQSWRLSLVLLAGLPLIGGAAVALSSVMSEAKAATSAQYAKAGGVANEALGAIRTVASLGAERKFMEAYNRLIEEA 265
            VPF  LFYFAD LD+  MFLGTL A A G AMP   I+FG + +  G   G+    ++++AL    LG    + S  +VAF+     RQ  R+R   L+SILRQ++ +FD     GE+   +S  T   QE  G +V + +Q  A FL G  +AFT+ W+L+LV+L+ LPLI  A   ++ V+S   +     YA+AGG+ +  +GAIRTVAS   E++ +E Y++ ++ A
Sbjct:   49 VPFYKLFYFADPLDYLLMFLGTLGAMANGFAMPALTIVFGQLANAFGQNSGNIHAMVHEVALRFVYLGGAASVASFGEVAFWICTGERQAARIRGLYLKSILRQDVAFFDKETTTGEVVGRMSGDTILIQEAIGEKVGKFIQLTATFLGGFAVAFTRGWKLTLVMLSALPLIVAAGGMMAVVVSRMSSRGQVAYAEAGGIVDRVIGAIRTVASFTGEKRAVEDYDKALKRA 279          

HSP 2 Score: 99.7525 bits (247), Expect = 8.027e-20
Identity = 73/210 (34.76%), Postives = 112/210 (53.33%), Query Frame = 0
Query:   53 MFLGTLSACATGVAMPVFMIIFGSILDEI-GTGQGSFKDTINQLALAMSALGAGTFLVSAFQVAFFAYASARQTERLRATLLRSILRQEIGWFD--TNNGGELATVLSEATSAFQEGTGRRVSEGVQALAQFLAGLIIAFTQSWRLSLVLLAGLPLIGGAAVALSSVMSEAKAATSAQYAKAGGVANEALGAIRTVASLGAERKFMEAYN 259
            +F+G+L+A A GV +P+F ++  SI+         + +  +N  ++    L    F+V+  Q+  F+    R   R+R  +   ILRQEI WFD   N+ G L   LS   +  +   G  +S  VQ +A   AGL++AFT SW+L+L++LA +PLIG   +     +    A     Y +A  VA+EA+ +IRTVAS  AE K M+ Y 
Sbjct:  739 VFVGSLAAAANGVILPLFGLLLSSIIGSFFEVNVHTLRRDVNFWSMMFLVLACSAFVVAPAQILCFSVVGNRLIRRIRTQMFEKILRQEISWFDASENSSGALGARLSSDAAHVRSMVGDTLSLFVQNVATVAAGLVLAFTASWQLALLVLALVPLIGLQHLMQVKFVQGFSADAKIMYEEASQVASEAVSSIRTVASYCAEVKVMDLYK 948          
BLAST of EWM23098.1 vs. NCBI_GenBank
Match: gi|302799932|ref|XP_002981724.1| (hypothetical protein SELMODRAFT_154740 [Selaginella moellendorffii] >gi|300150556|gb|EFJ17206.1| hypothetical protein SELMODRAFT_154740 [Selaginella moellendorffii])

HSP 1 Score: 175.637 bits (444), Expect = 5.993e-46
Identity = 93/231 (40.26%), Postives = 136/231 (58.87%), Query Frame = 0
Query:   36 VPFSDLFYFADGLDWFCMFLGTLSACATGVAMPVFMIIFGSILDEIGTGQGSFKDTINQLALAMSALGAGTFLVSAFQVAFFAYASARQTERLRATLLRSILRQEIGWFDTN-NGGELATVLSEATSAFQEGTGRRVSEGVQALAQFLAGLIIAFTQSWRLSLVLLAGLPLIGGAAVALSSVMSEAKAATSAQYAKAGGVANEALGAIRTVASLGAERKFMEAYNRLIEEA 265
            VPF  LFYFAD LD+  MFLGTL A A G AMP   I+FG + +  G   G+    ++++AL    LG    + S  +VAF+     RQ  R+R   L+SILRQ++ +FD     GE+   +S  T   QE  G +V + +Q  A FL G  +AFT+ W+L+LV+L+ LPLI  A   ++ V+S   +     YA+AGG+ +  +GAIRTVAS   E++ +E Y++ ++ A
Sbjct:   29 VPFYKLFYFADPLDYLLMFLGTLGAMANGFAMPALTIVFGQLANAFGQNSGNIHAMVHEVALRFVYLGGAASVASFGEVAFWICTGERQAARIRGLYLKSILRQDVAFFDKETTTGEVVGRMSGDTILIQEAIGEKVGKFIQLTATFLGGFAVAFTRGWKLTLVMLSALPLIVAAGGMMAVVVSRMSSRGQVAYAEAGGIVDRVIGAIRTVASFTGEKRAVEDYDKALKRA 259          

HSP 2 Score: 99.7525 bits (247), Expect = 9.576e-20
Identity = 73/210 (34.76%), Postives = 112/210 (53.33%), Query Frame = 0
Query:   53 MFLGTLSACATGVAMPVFMIIFGSILDEI-GTGQGSFKDTINQLALAMSALGAGTFLVSAFQVAFFAYASARQTERLRATLLRSILRQEIGWFD--TNNGGELATVLSEATSAFQEGTGRRVSEGVQALAQFLAGLIIAFTQSWRLSLVLLAGLPLIGGAAVALSSVMSEAKAATSAQYAKAGGVANEALGAIRTVASLGAERKFMEAYN 259
            +F+G+L+A A GV +P+F ++  SI+         + +  +N  ++    L    F+V+  Q+  F+    R   R+R  +   ILRQEI WFD   N+ G L   LS   +  +   G  +S  VQ +A   AGL++AFT SW+L+L++LA +PLIG   +     +    A     Y +A  VA+EA+ +IRTVAS  AE K M+ Y 
Sbjct:  719 VFVGSLAAAANGVILPLFGLLLSSIIGSFFEVNVHTLRRDVNFWSMMFLVLACSAFVVAPAQILCFSVVGNRLIRRIRTQMFEKILRQEISWFDASENSSGALGARLSSDAAHVRSMVGDTLSLFVQNVATVAAGLVLAFTASWQLALLVLALVPLIGLQHLMQVKFVQGFSADAKIMYEEASQVASEAVSSIRTVASYCAEVKVMDLYK 928          
BLAST of EWM23098.1 vs. NCBI_GenBank
Match: gi|731235182|ref|XP_010631194.1| (PREDICTED: multidrug resistance protein 1 isoform X7 [Fukomys damarensis])

HSP 1 Score: 171.4 bits (433), Expect = 8.694e-46
Identity = 86/240 (35.83%), Postives = 143/240 (59.58%), Query Frame = 0
Query:   41 LFYFADGLDWFCMFLGTLSACATGVAMPVFMIIFGSILDE-IGTGQ------------GSFKDTINQLALAMSALGAGTFLVSAFQVAFFAYASARQTERLRATLLRSILRQEIGWFDTNNGGELATVLSEATSAFQEGTGRRVSEGVQALAQFLAGLIIAFTQSWRLSLVLLAGLPLIGGAAVALSSVMSEAKAATSAQYAKAGGVANEALGAIRTVASLGAERKFMEAYNRLIEEAER 267
            +F ++D LD   M LG+L A   G A PV +++FG+++D  +  G             G+ ++ +   A   + +GAG  + +  QV+F+  A+ RQ +++R     ++++QEIGWFD ++ GEL T L++  S   EG G ++    Q++A F+AG +I FT+ W+L+LV+LA  P++G +A   + ++S       + YAKAG VA E L AIRTV + G ++K +E YN+ +EEA+R
Sbjct:   38 MFRYSDWLDRLYMVLGSLGAIVHGAAFPVVLLVFGNMMDIFVSAGNHSQSDDNTTASFGTLEEDMTVYAYYYTGIGAGVLIAAYLQVSFWCLAAGRQIQKIRKQFFHAVMKQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQSMATFVAGFVIGFTRGWKLTLVILAVSPVLGLSAAICAKILSSFTDKELSAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNKNLEEAKR 277          
BLAST of EWM23098.1 vs. NCBI_GenBank
Match: gi|731235180|ref|XP_010631192.1| (PREDICTED: multidrug resistance protein 1 isoform X6 [Fukomys damarensis])

HSP 1 Score: 171.785 bits (434), Expect = 1.295e-45
Identity = 86/240 (35.83%), Postives = 143/240 (59.58%), Query Frame = 0
Query:   41 LFYFADGLDWFCMFLGTLSACATGVAMPVFMIIFGSILDE-IGTGQ------------GSFKDTINQLALAMSALGAGTFLVSAFQVAFFAYASARQTERLRATLLRSILRQEIGWFDTNNGGELATVLSEATSAFQEGTGRRVSEGVQALAQFLAGLIIAFTQSWRLSLVLLAGLPLIGGAAVALSSVMSEAKAATSAQYAKAGGVANEALGAIRTVASLGAERKFMEAYNRLIEEAER 267
            +F ++D LD   M LG+L A   G A PV +++FG+++D  +  G             G+ ++ +   A   + +GAG  + +  QV+F+  A+ RQ +++R     ++++QEIGWFD ++ GEL T L++  S   EG G ++    Q++A F+AG +I FT+ W+L+LV+LA  P++G +A   + ++S       + YAKAG VA E L AIRTV + G ++K +E YN+ +EEA+R
Sbjct:   38 MFRYSDWLDRLYMVLGSLGAIVHGAAFPVVLLVFGNMMDIFVSAGNHSQSDDNTTASFGTLEEDMTVYAYYYTGIGAGVLIAAYLQVSFWCLAAGRQIQKIRKQFFHAVMKQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQSMATFVAGFVIGFTRGWKLTLVILAVSPVLGLSAAICAKILSSFTDKELSAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNKNLEEAKR 277          
BLAST of EWM23098.1 vs. NCBI_GenBank
Match: gi|533147237|ref|XP_005388031.1| (PREDICTED: multidrug resistance protein 1 [Chinchilla lanigera])

HSP 1 Score: 173.711 bits (439), Expect = 2.942e-45
Identity = 93/239 (38.91%), Postives = 140/239 (58.58%), Query Frame = 0
Query:   41 LFYFADGLDWFCMFLGTLSACATGVAMPVFMIIFGSILD-----------EIGTGQ-GSFKDTINQLALAMSALGAGTFLVSAFQVAFFAYASARQTERLRATLLRSILRQEIGWFDTNNGGELATVLSEATSAFQEGTGRRVSEGVQALAQFLAGLIIAFTQSWRLSLVLLAGLPLIGGAAVALSSVMSEAKAATSAQYAKAGGVANEALGAIRTVASLGAERKFMEAYNRLIEEAER 267
            +F ++D LD   M LG L+A   G A+P+ M++FG + D           E  TG   S +D +   A   + +GAG  + +  QV+F+  A+ RQ +++R     SI++QEIGWFD ++ GEL T L++  S   EG G ++    Q++A FLAG II FT+ W+L+LV+LA  P++G +A   + ++S         YAKAG VA E L AIRTV + G + K +E YN+ +EEA+R
Sbjct:   38 MFRYSDWLDRLYMVLGALAAVIHGAALPLMMLVFGDMTDSFASAGNISLSENNTGIFSSLEDEMTIYAYYYTGIGAGVLIAAYVQVSFWCLAAGRQIQKIRKQFFHSIMKQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQSMATFLAGFIIGFTRGWKLTLVILAVSPVLGLSAAIWAKILSSFTDKELLAYAKAGAVAEEVLAAIRTVIAFGGQNKELERYNKNLEEAKR 276          

HSP 2 Score: 97.4413 bits (241), Expect = 5.316e-19
Identity = 70/224 (31.25%), Postives = 104/224 (46.43%), Query Frame = 0
Query:   49 DWFCMFLGTLSACATGVAMPVFMIIFGSIL-------DEIGTGQGSFKDTINQLALAMSALGAGTFLVSAFQVAFFAYASARQTERLRATLLRSILRQEIGWFD--TNNGGELATVLSEATSAFQEGTGRRVSEGVQALAQFLAGLIIAFTQSWRLSLVLLAGLPLIGGAAVALSSVMSEAKAATSAQYAKAGGVANEALGAIRTVASLGAERKFMEAYNRLIE 263
            +W    +G   A   G   P F +IF  I+       D+    Q S     N  AL    LG  +F+    Q   F  A    T+RLR  + +S+LRQ++ WFD   N  G L T L+   +  +   G R++   Q +A    G+II+F   W+L+L+LLA +P+I  A V    ++S        +   AG +A EA+   RTV SL  E KF   Y + ++
Sbjct:  695 EWPYFVVGVFCAIINGGLQPAFAVIFSRIIGVFTRNDDDETKRQNS-----NLFALLFLVLGIISFITFFLQGFTFGKAGEILTKRLRYLVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGAIGSRLAVITQNVANLGTGIIISFIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGNALKDKKELEGAGKIATEAIENFRTVVSLTREEKFEHMYGQSLQ 913          
BLAST of EWM23098.1 vs. NCBI_GenBank
Match: gi|861423733|ref|XP_012925820.1| (phosphatidylcholine translocator ABCB4 isoform X6 [Heterocephalus glaber])

HSP 1 Score: 173.326 bits (438), Expect = 3.348e-45
Identity = 99/275 (36.00%), Postives = 146/275 (53.09%), Query Frame = 0
Query:   10 PSAGDAKDKDALTASTPAPPAPKVELVPFSDLFYFADGLDWFCMFLGTLSACATGVAMPVFMIIFGSILDEIGTGQGSFKDTIN-----------------QLALAMSALGAGTFLVSAFQVAFFAYASARQTERLRATLLRSILRQEIGWFDTNNGGELATVLSEATSAFQEGTGRRVSEGVQALAQFLAGLIIAFTQSWRLSLVLLAGLPLIGGAAVALSSVMSEAKAATSAQYAKAGGVANEALGAIRTVASLGAERKFMEAYNRLIEEAER 267
            P     +DK+ +          KV L+    LF ++D  D   M LGT+ A A G  +P+ MI+FG + D+     G+F   +N                 + A   S LGAG  + +  QV+F+  A+ RQ +++R     SILRQEIGWFD N+  EL T L++  S   EG G +V    QA+A F AG I+ F + W+L+LV++A  P++G +    + V+S       A Y+KAG VA EALGAIRTV + G + K +E Y + +E A++
Sbjct:   17 PRGCSNQDKEKM---------KKVNLIGPLTLFRYSDWQDKALMCLGTIMAVAHGSGLPLMMIVFGDMTDKFVNADGNFSFPVNFSLSQLNPGRILEEEMTRYAYYYSGLGAGVLVAAYIQVSFWTLAAGRQIKKIRQKFFHSILRQEIGWFDINDITELNTRLTDDISKISEGIGDKVGMFFQAVATFFAGFIVGFIRGWKLTLVVMAISPVLGVSTAVWAKVLSRFSDMELAAYSKAGAVAEEALGAIRTVLAFGGQNKMLERYQKHLENAKK 282          

HSP 2 Score: 97.0561 bits (240), Expect = 6.404e-19
Identity = 72/240 (30.00%), Postives = 108/240 (45.00%), Query Frame = 0
Query:   49 DWFCMFLGTLSACATGVAMPVFMIIFGSILDEIGTGQGSFK-DTINQLALAMSALGAGTFLVSAFQVAF-------------------------FAYASARQ--TERLRATLLRSILRQEIGWFDT--NNGGELATVLSEATSAFQEGTGRRVSEGVQALAQFLAGLIIAFTQSWRLSLVLLAGLPLIGGAAVALSSVMSEAKAATSAQYAKAGGVANEALGAIRTVASLGAERKFMEAY 258
            +W  + +GT  A A G   P F IIF  +L   G G  + K    N  +L   ALG  +F     Q ++                         F +  A +  T RLR+    ++LRQ++ WFD   N+ G L+T L+   +  Q   G R++   Q  A    G+II+F   W+L+L+LLA +P I  + +    +++        +   AG +A EA+  IRTV SL  ERKF   Y
Sbjct:  700 EWPYLVVGTACAIANGALQPAFSIIFSEMLAIFGPGDDAVKQHKCNMFSLLFLALGIISFFTFFLQSSYSVSKNTVSWSCPAALLSSLLSPCTGFTFGKAGEILTSRLRSRAFEAMLRQDVSWFDDHGNSTGALSTRLATDAAQVQGAVGTRLALITQNTANLGTGIIISFIYGWQLTLLLLAVVPFIAVSGIIEMKMLAGNAKRDKKELEIAGKIATEAIENIRTVVSLTQERKFESMY 939          
The following BLAST results are available for this feature:
BLAST of EWM23098.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103960|gb|EWM23098.1|0.000e+0100.00abc transporter b family protein [Nannochloropsis ... [more]
gi|553194387|ref|XP_005855944.1|1.872e-93100.00atp-binding cassette transporter [Nannochloropsis ... [more]
gi|669137100|ref|XP_008604118.1|1.596e-4636.47hypothetical protein SDRG_00422 [Saprolegnia dicli... [more]
gi|973139745|ref|XP_015213560.1|1.979e-4636.92PREDICTED: multidrug resistance protein 1 [Lepisos... [more]
gi|302768767|ref|XP_002967803.1|5.840e-4640.26ATP-binding cassette transporter [Selaginella moel... [more]
gi|302799932|ref|XP_002981724.1|5.993e-4640.26hypothetical protein SELMODRAFT_154740 [Selaginell... [more]
gi|731235182|ref|XP_010631194.1|8.694e-4635.83PREDICTED: multidrug resistance protein 1 isoform ... [more]
gi|731235180|ref|XP_010631192.1|1.295e-4535.83PREDICTED: multidrug resistance protein 1 isoform ... [more]
gi|533147237|ref|XP_005388031.1|2.942e-4538.91PREDICTED: multidrug resistance protein 1 [Chinchi... [more]
gi|861423733|ref|XP_012925820.1|3.348e-4536.00phosphatidylcholine translocator ABCB4 isoform X6 ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7598rna7598Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications