EWM23108.1, cds7565 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23108.1 vs. NCBI_GenBank
Match: gi|585103978|gb|EWM23108.1| (soluble pyridine nucleotide transhydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 396.356 bits (1017), Expect = 1.607e-139 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0
Query: 1 MRLALILIALAGRAKIQLLSMWYLRRFLLRQPRSHALCPTSPSSSHAPSSSLPSSPLQCRALSSTGGAGFYNFPPSAHYDLIVIGSGPAAQKCAIDSVKRGRRVAMIDKNSQMGGVCVHTGKKSPCPPWGIFDVGTEDLGRVLRRPVGVGRAGRGQRGTTAPRMHSTTHSSSPRLRTQPCPRDQAPSRARRSGRPSCT 198
MRLALILIALAGRAKIQLLSMWYLRRFLLRQPRSHALCPTSPSSSHAPSSSLPSSPLQCRALSSTGGAGFYNFPPSAHYDLIVIGSGPAAQKCAIDSVKRGRRVAMIDKNSQMGGVCVHTGKKSPCPPWGIFDVGTEDLGRVLRRPVGVGRAGRGQRGTTAPRMHSTTHSSSPRLRTQPCPRDQAPSRARRSGRPSCT
Sbjct: 1 MRLALILIALAGRAKIQLLSMWYLRRFLLRQPRSHALCPTSPSSSHAPSSSLPSSPLQCRALSSTGGAGFYNFPPSAHYDLIVIGSGPAAQKCAIDSVKRGRRVAMIDKNSQMGGVCVHTGKKSPCPPWGIFDVGTEDLGRVLRRPVGVGRAGRGQRGTTAPRMHSTTHSSSPRLRTQPCPRDQAPSRARRSGRPSCT 198
BLAST of EWM23108.1 vs. NCBI_GenBank
Match: gi|1214692620|gb|OWZ07177.1| (Soluble pyridine nucleotide transhydrogenase, partial [Phytophthora megakarya]) HSP 1 Score: 80.1073 bits (196), Expect = 4.396e-16 Identity = 37/68 (54.41%), Postives = 46/68 (67.65%), Query Frame = 0
Query: 54 SSPLQCRALSSTGGAGFYNFPPSAHYDLIVIGSGPAAQKCAIDSVKRGRRVAMIDKNSQMGGVCVHTG 121
+P +C+ L+ T S H+DLIVIGSGPA QKCAIDS K G+ VA++DK +GGVCVHTG
Sbjct: 32 EAPAECKPLTDT----LRELRASEHFDLIVIGSGPAGQKCAIDSAKHGKSVAIVDKRDMLGGVCVHTG 95
BLAST of EWM23108.1 vs. NCBI_GenBank
Match: gi|298706388|emb|CBJ29397.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 82.0333 bits (201), Expect = 8.029e-15 Identity = 41/76 (53.95%), Postives = 53/76 (69.74%), Query Frame = 0
Query: 46 HAPSSSLPSSPLQCRALSSTGGAGFYNFPPSAHYDLIVIGSGPAAQKCAIDSVKRGRRVAMIDKNSQMGGVCVHTG 121
HAPS +S Q AL+ + SAHYDL+++GSGPAAQKCAI+S K G+ V ++DK+SQ+GGVCVHTG
Sbjct: 20 HAPSLCGRASSTQAAALAKS----------SAHYDLVIVGSGPAAQKCAIESAKYGKSVCIVDKSSQLGGVCVHTG 85
BLAST of EWM23108.1 vs. NCBI_GenBank
Match: gi|635371730|emb|CCI39993.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 81.6481 bits (200), Expect = 1.158e-14 Identity = 36/50 (72.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query: 72 NFPPSAHYDLIVIGSGPAAQKCAIDSVKRGRRVAMIDKNSQMGGVCVHTG 121
+ S HYDLIVIGSGPA QKCAIDS K G+ VA+IDKN GGVCVHTG
Sbjct: 38 DLKASEHYDLIVIGSGPAGQKCAIDSAKHGKSVAIIDKNEMHGGVCVHTG 87
BLAST of EWM23108.1 vs. NCBI_GenBank
Match: gi|325179632|emb|CCA14030.1| (soluble pyridine nucleotide transhydrogenase putative [Albugo laibachii Nc14]) HSP 1 Score: 80.8777 bits (198), Expect = 2.133e-14 Identity = 35/50 (70.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query: 72 NFPPSAHYDLIVIGSGPAAQKCAIDSVKRGRRVAMIDKNSQMGGVCVHTG 121
+ S HYDLIV+GSGPA QKCAIDS K G+ VA+IDKN GGVCVHTG
Sbjct: 48 DLKASEHYDLIVVGSGPAGQKCAIDSAKHGKSVAIIDKNEMHGGVCVHTG 97
BLAST of EWM23108.1 vs. NCBI_GenBank
Match: gi|673034636|ref|XP_008871279.1| (hypothetical protein, variant 2 [Aphanomyces invadans] >gi|574473250|gb|ETW00254.1| hypothetical protein, variant 2 [Aphanomyces invadans]) HSP 1 Score: 79.7221 bits (195), Expect = 6.224e-14 Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query: 72 NFPPSAHYDLIVIGSGPAAQKCAIDSVKRGRRVAMIDKNSQMGGVCVHTG 121
N S H+DL+VIGSGPA QKCAIDS K G++VA+IDK GGVCVHTG
Sbjct: 34 NLRASEHFDLVVIGSGPAGQKCAIDSAKHGKKVAIIDKKDMHGGVCVHTG 83
BLAST of EWM23108.1 vs. NCBI_GenBank
Match: gi|673034632|ref|XP_008871277.1| (hypothetical protein H310_07641 [Aphanomyces invadans] >gi|574473248|gb|ETW00252.1| hypothetical protein H310_07641 [Aphanomyces invadans]) HSP 1 Score: 79.7221 bits (195), Expect = 6.306e-14 Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query: 72 NFPPSAHYDLIVIGSGPAAQKCAIDSVKRGRRVAMIDKNSQMGGVCVHTG 121
N S H+DL+VIGSGPA QKCAIDS K G++VA+IDK GGVCVHTG
Sbjct: 34 NLRASEHFDLVVIGSGPAGQKCAIDSAKHGKKVAIIDKKDMHGGVCVHTG 83
BLAST of EWM23108.1 vs. NCBI_GenBank
Match: gi|673034634|ref|XP_008871278.1| (hypothetical protein, variant 1 [Aphanomyces invadans] >gi|574473249|gb|ETW00253.1| hypothetical protein, variant 1 [Aphanomyces invadans]) HSP 1 Score: 79.337 bits (194), Expect = 7.246e-14 Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query: 72 NFPPSAHYDLIVIGSGPAAQKCAIDSVKRGRRVAMIDKNSQMGGVCVHTG 121
N S H+DL+VIGSGPA QKCAIDS K G++VA+IDK GGVCVHTG
Sbjct: 34 NLRASEHFDLVVIGSGPAGQKCAIDSAKHGKKVAIIDKKDMHGGVCVHTG 83
BLAST of EWM23108.1 vs. NCBI_GenBank
Match: gi|1173932726|gb|OQR84643.1| (soluble pyridine nucleotide transhydrogenase [Achlya hypogyna]) HSP 1 Score: 79.337 bits (194), Expect = 7.254e-14 Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query: 72 NFPPSAHYDLIVIGSGPAAQKCAIDSVKRGRRVAMIDKNSQMGGVCVHTG 121
N S H+DL+VIGSGPA QKCAIDS K G++VA+IDK GGVCVHTG
Sbjct: 41 NLRASEHFDLVVIGSGPAGQKCAIDSAKHGKKVAIIDKKDMHGGVCVHTG 90
BLAST of EWM23108.1 vs. NCBI_GenBank
Match: gi|698796506|ref|XP_009831282.1| (hypothetical protein, variant 1 [Aphanomyces astaci] >gi|574113951|gb|ETV79440.1| hypothetical protein, variant 1 [Aphanomyces astaci]) HSP 1 Score: 78.9518 bits (193), Expect = 9.506e-14 Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query: 72 NFPPSAHYDLIVIGSGPAAQKCAIDSVKRGRRVAMIDKNSQMGGVCVHTG 121
N S H+DL+VIGSGPA QKCAIDS K G++VA+IDK GGVCVHTG
Sbjct: 32 NLRASEHFDLVVIGSGPAGQKCAIDSAKHGKKVAIIDKKDMHGGVCVHTG 81 The following BLAST results are available for this feature:
BLAST of EWM23108.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|