EWM23110.1, cds7563 (CDS) Nannochloropsis gaditana

Overview
NameEWM23110.1
Unique Namecds7563
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:299508..299660 -
Alignment locationCM002472.1:299244..299379 -
Alignment locationCM002472.1:298858..299048 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23110.1
Productsoluble pyridine nucleotide transhydrogenase
Orig transcript idgnl|cribi|Naga_102104g1.4467.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:299508..299660 -
CM002472.1supercontigCM002472.1:299244..299379 -
CM002472.1supercontigCM002472.1:298858..299048 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0016491oxidoreductase activity
GO:0050660flavin adenine dinucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0019725cellular homeostasis
GO:0045454cell redox homeostasis
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0005623cell
Vocabulary: INTERPRO
TermDefinition
IPR016156FAD/NAD-linked_Rdtase_dimer
IPR004099Pyr_nucl-diS_OxRdtase_dimer
Homology
[Close]
BLAST of EWM23110.1 vs. NCBI_GenBank
Match: gi|585103982|gb|EWM23110.1| (soluble pyridine nucleotide transhydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 323.553 bits (828), Expect = 4.856e-112
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0 
Query:    1 MWGDFEAIPEHSMAAEQGEEVKSVLQQGGFLGRDTERLFPYGIYTIPEISMIGKTEEQLTAEKVPYEVGIANYKELAKGQMLGGMDGFLKLIFSTEDFRILGVHAIGEGATEIVHIGQVVMAAGGSVHYFVDAVFNFPTLAEAYNVAAHNGLKNMGINV 159
            MWGDFEAIPEHSMAAEQGEEVKSVLQQGGFLGRDTERLFPYGIYTIPEISMIGKTEEQLTAEKVPYEVGIANYKELAKGQMLGGMDGFLKLIFSTEDFRILGVHAIGEGATEIVHIGQVVMAAGGSVHYFVDAVFNFPTLAEAYNVAAHNGLKNMGINV
Sbjct:    1 MWGDFEAIPEHSMAAEQGEEVKSVLQQGGFLGRDTERLFPYGIYTIPEISMIGKTEEQLTAEKVPYEVGIANYKELAKGQMLGGMDGFLKLIFSTEDFRILGVHAIGEGATEIVHIGQVVMAAGGSVHYFVDAVFNFPTLAEAYNVAAHNGLKNMGINV 159
[Close]
BLAST of EWM23110.1 vs. NCBI_GenBank
Match: gi|298705077|emb|CBJ28536.1| (hypothetical protein Esi_0108_0050 [Ectocarpus siliculosus])

HSP 1 Score: 210.305 bits (534), Expect = 7.634e-63
Identity = 107/162 (66.05%), Postives = 129/162 (79.63%), Query Frame = 0 
Query:    1 MWG-----DFEAIPEHSMAAEQGE--EVKSVLQQGGFLGRDTERLFPYGIYTIPEISMIGKTEEQLTAEKVPYEVGIANYKELAKGQMLGGMDGFLKLIFSTEDFRILGVHAIGEGATEIVHIGQVVMAAGGSVHYFVDAVFNFPTLAEAYNVAAHNGLKNM 155
            MWG     D E+  +    +++ E   VKSV   GGFLGR++E+LFPYGIYTIPE+SMIGKTE QLTAE V YEVG+A+Y+ELAKGQMLGG DGFLKLIF TE  ++LGVH IG+GATEI+HIGQVVM+ GG++ YF  AVFNFPTLAEAYNVAA +GL+ +
Sbjct:  347 MWGRRPRLDGESKGDQLDVSDETEHARVKSV-ADGGFLGRESEQLFPYGIYTIPEVSMIGKTEAQLTAEGVSYEVGLADYQELAKGQMLGGADGFLKLIFHTETLKLLGVHCIGDGATEIIHIGQVVMSQGGTIEYFQTAVFNFPTLAEAYNVAAADGLRKV 507
[Close]
BLAST of EWM23110.1 vs. NCBI_GenBank
Match: gi|695405137|ref|XP_009523719.1| (hypothetical protein PHYSODRAFT_489418 [Phytophthora sojae] >gi|348681186|gb|EGZ21002.1| hypothetical protein PHYSODRAFT_489418 [Phytophthora sojae])

HSP 1 Score: 186.037 bits (471), Expect = 6.065e-54
Identity = 84/118 (71.19%), Postives = 104/118 (88.14%), Query Frame = 0 
Query:   38 LFPYGIYTIPEISMIGKTEEQLTAEKVPYEVGIANYKELAKGQMLGGMDGFLKLIFSTEDFRILGVHAIGEGATEIVHIGQVVMAAGGSVHYFVDAVFNFPTLAEAYNVAAHNGLKNM 155
            +FP+GIYT+PEISM+GK E+QLT E+VPYEVG+A Y+ELA+GQMLGG+ GFLK+IF  E  +ILGVHAIGEGATEI+HIGQVVM+ GG++ YF +AVFN+PTLAEAY VAA NGL+ +
Sbjct:  348 VFPFGIYTVPEISMVGKNEQQLTKEQVPYEVGMARYEELARGQMLGGLPGFLKIIFCPETLKILGVHAIGEGATEIIHIGQVVMSTGGTLEYFRNAVFNYPTLAEAYRVAALNGLRKI 465
[Close]
BLAST of EWM23110.1 vs. NCBI_GenBank
Match: gi|1214689313|gb|OWZ04935.1| (Soluble pyridine nucleotide transhydrogenase [Phytophthora megakarya])

HSP 1 Score: 186.422 bits (472), Expect = 1.883e-53
Identity = 84/118 (71.19%), Postives = 103/118 (87.29%), Query Frame = 0 
Query:   38 LFPYGIYTIPEISMIGKTEEQLTAEKVPYEVGIANYKELAKGQMLGGMDGFLKLIFSTEDFRILGVHAIGEGATEIVHIGQVVMAAGGSVHYFVDAVFNFPTLAEAYNVAAHNGLKNM 155
            +FP+GIYT+PEISM+GK E+QLT E+VPYEVG+A Y+ELAKGQMLGG+ GFLK+IF  E  +I GVHAIGEGATEI+HIGQVVM+ GG++ YF +AVFN+PTLAEAY VAA NGL+ +
Sbjct:  242 VFPFGIYTVPEISMVGKNEQQLTKEQVPYEVGVARYEELAKGQMLGGVPGFLKIIFCPETLKIFGVHAIGEGATEIIHIGQVVMSTGGTLEYFRNAVFNYPTLAEAYRVAALNGLRKI 359
[Close]
BLAST of EWM23110.1 vs. NCBI_GenBank
Match: gi|301121324|ref|XP_002908389.1| (soluble pyridine nucleotide transhydrogenase, putative [Phytophthora infestans T30-4] >gi|262103420|gb|EEY61472.1| soluble pyridine nucleotide transhydrogenase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 183.726 bits (465), Expect = 4.999e-53
Identity = 82/118 (69.49%), Postives = 103/118 (87.29%), Query Frame = 0 
Query:   38 LFPYGIYTIPEISMIGKTEEQLTAEKVPYEVGIANYKELAKGQMLGGMDGFLKLIFSTEDFRILGVHAIGEGATEIVHIGQVVMAAGGSVHYFVDAVFNFPTLAEAYNVAAHNGLKNM 155
            +FP+GIYT+PEISM+GK E+QLT E+VPYEVG+A Y+ELA+GQMLGG+ GFLK+IF  +  +I GVHAIGEGATEI+HIGQVVM+ GG++ YF +AVFN+PTLAEAY VAA NGL+ +
Sbjct:  348 VFPFGIYTVPEISMVGKNEQQLTKEQVPYEVGVARYEELARGQMLGGVPGFLKIIFCPDTLKIFGVHAIGEGATEIIHIGQVVMSTGGTLEYFRNAVFNYPTLAEAYRVAALNGLRKI 465
[Close]
BLAST of EWM23110.1 vs. NCBI_GenBank
Match: gi|970661151|gb|KUF98642.1| (S-formylglutathione hydrolase [Phytophthora nicotianae])

HSP 1 Score: 184.496 bits (467), Expect = 6.332e-53
Identity = 82/118 (69.49%), Postives = 103/118 (87.29%), Query Frame = 0 
Query:   38 LFPYGIYTIPEISMIGKTEEQLTAEKVPYEVGIANYKELAKGQMLGGMDGFLKLIFSTEDFRILGVHAIGEGATEIVHIGQVVMAAGGSVHYFVDAVFNFPTLAEAYNVAAHNGLKNM 155
            +FP+GIYT+PEISM+GK E+QLT E+VPYEVG+A Y+ELA+GQMLGG+ GFLK+IF  +  +I GVHAIGEGATEI+HIGQVVM+ GG++ YF +AVFN+PTLAEAY VAA NGL+ +
Sbjct:  397 VFPFGIYTVPEISMVGKNEQQLTKEQVPYEVGVARYEELARGQMLGGVPGFLKIIFCPDTLKIFGVHAIGEGATEIIHIGQVVMSTGGTLEYFRNAVFNYPTLAEAYRVAALNGLRKI 514
[Close]
BLAST of EWM23110.1 vs. NCBI_GenBank
Match: gi|673034632|ref|XP_008871277.1| (hypothetical protein H310_07641 [Aphanomyces invadans] >gi|574473248|gb|ETW00252.1| hypothetical protein H310_07641 [Aphanomyces invadans])

HSP 1 Score: 184.496 bits (467), Expect = 1.110e-52
Identity = 83/118 (70.34%), Postives = 102/118 (86.44%), Query Frame = 0 
Query:   38 LFPYGIYTIPEISMIGKTEEQLTAEKVPYEVGIANYKELAKGQMLGGMDGFLKLIFSTEDFRILGVHAIGEGATEIVHIGQVVMAAGGSVHYFVDAVFNFPTLAEAYNVAAHNGLKNM 155
            +FP+GIYT+PEISM+GK+E+QL+ E +PYEVGIA Y+ELAKGQMLGGM GFLKLIF     ++LGVHAIGEGATEI+HIGQVVM+ GG++ YF +AVFN+PTLAEAY VA  NGL+ +
Sbjct:  423 VFPFGIYTVPEISMVGKSEQQLSKENIPYEVGIARYEELAKGQMLGGMPGFLKLIFCPTTLKLLGVHAIGEGATEIIHIGQVVMSTGGTMEYFRNAVFNYPTLAEAYRVAGLNGLRKI 540
[Close]
BLAST of EWM23110.1 vs. NCBI_GenBank
Match: gi|567971113|gb|ETK96126.1| (hypothetical protein L915_01044 [Phytophthora parasitica] >gi|567999464|gb|ETL49502.1| hypothetical protein L916_01027 [Phytophthora parasitica] >gi|570961155|gb|ETP26134.1| hypothetical protein F441_01076 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 183.726 bits (465), Expect = 1.806e-52
Identity = 82/118 (69.49%), Postives = 103/118 (87.29%), Query Frame = 0 
Query:   38 LFPYGIYTIPEISMIGKTEEQLTAEKVPYEVGIANYKELAKGQMLGGMDGFLKLIFSTEDFRILGVHAIGEGATEIVHIGQVVMAAGGSVHYFVDAVFNFPTLAEAYNVAAHNGLKNM 155
            +FP+GIYT+PEISM+GK E+QLT E+VPYEVG+A Y+ELA+GQMLGG+ GFLK+IF  +  +I GVHAIGEGATEI+HIGQVVM+ GG++ YF +AVFN+PTLAEAY VAA NGL+ +
Sbjct:  428 VFPFGIYTVPEISMVGKNEQQLTKEQVPYEVGVARYEELARGQMLGGVPGFLKIIFCPDTLKIFGVHAIGEGATEIIHIGQVVMSTGGTLEYFRNAVFNYPTLAEAYRVAALNGLRKI 545
[Close]
BLAST of EWM23110.1 vs. NCBI_GenBank
Match: gi|675163755|ref|XP_008890762.1| (hypothetical protein PPTG_00938 [Phytophthora parasitica INRA-310] >gi|566033442|gb|ETI56353.1| hypothetical protein F443_01102 [Phytophthora parasitica P1569] >gi|568028638|gb|ETM02576.1| hypothetical protein L917_00995 [Phytophthora parasitica] >gi|568059229|gb|ETM55806.1| hypothetical protein L914_01033 [Phytophthora parasitica] >gi|568110112|gb|ETN24719.1| hypothetical protein PPTG_00938 [Phytophthora parasitica INRA-310] >gi|570337134|gb|ETO85082.1| hypothetical protein F444_01109 [Phytophthora parasitica P1976] >gi|570997828|gb|ETP54131.1| hypothetical protein F442_01051 [Phytophthora parasitica P10297] >gi|970634703|gb|KUF79833.1| hypothetical protein AM587_10014683 [Phytophthora nicotianae] >gi|970644541|gb|KUF85339.1| hypothetical protein AM587_10015190 [Phytophthora nicotianae])

HSP 1 Score: 183.726 bits (465), Expect = 1.965e-52
Identity = 82/118 (69.49%), Postives = 103/118 (87.29%), Query Frame = 0 
Query:   38 LFPYGIYTIPEISMIGKTEEQLTAEKVPYEVGIANYKELAKGQMLGGMDGFLKLIFSTEDFRILGVHAIGEGATEIVHIGQVVMAAGGSVHYFVDAVFNFPTLAEAYNVAAHNGLKNM 155
            +FP+GIYT+PEISM+GK E+QLT E+VPYEVG+A Y+ELA+GQMLGG+ GFLK+IF  +  +I GVHAIGEGATEI+HIGQVVM+ GG++ YF +AVFN+PTLAEAY VAA NGL+ +
Sbjct:  428 VFPFGIYTVPEISMVGKNEQQLTKEQVPYEVGVARYEELARGQMLGGVPGFLKIIFCPDTLKIFGVHAIGEGATEIIHIGQVVMSTGGTLEYFRNAVFNYPTLAEAYRVAALNGLRKI 545
[Close]
BLAST of EWM23110.1 vs. NCBI_GenBank
Match: gi|698796506|ref|XP_009831282.1| (hypothetical protein, variant 1 [Aphanomyces astaci] >gi|574113951|gb|ETV79440.1| hypothetical protein, variant 1 [Aphanomyces astaci])

HSP 1 Score: 182.57 bits (462), Expect = 5.257e-52
Identity = 82/118 (69.49%), Postives = 101/118 (85.59%), Query Frame = 0 
Query:   38 LFPYGIYTIPEISMIGKTEEQLTAEKVPYEVGIANYKELAKGQMLGGMDGFLKLIFSTEDFRILGVHAIGEGATEIVHIGQVVMAAGGSVHYFVDAVFNFPTLAEAYNVAAHNGLKNM 155
            +FP+GIYT+PEISM+GK+E+QL+ E +PYEVGIA Y+ELAKGQM+GGM GFLKLIF     ++LGVHAIGEGATEI+HIGQVVM+ GG++ YF +AVFN+PTLAEAY VA  NGL  +
Sbjct:  421 VFPFGIYTVPEISMVGKSEQQLSRENIPYEVGIARYEELAKGQMMGGMPGFLKLIFCPTTLKLLGVHAIGEGATEIIHIGQVVMSTGGTMEYFRNAVFNYPTLAEAYRVAGLNGLSKI 538
The following BLAST results are available for this feature:
BLAST of EWM23110.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103982|gb|EWM23110.1|4.856e-112100.00soluble pyridine nucleotide transhydrogenase [Nann... [more]
gi|298705077|emb|CBJ28536.1|7.634e-6366.05hypothetical protein Esi_0108_0050 [Ectocarpus sil... [more]
gi|695405137|ref|XP_009523719.1|6.065e-5471.19hypothetical protein PHYSODRAFT_489418 [Phytophtho... [more]
gi|1214689313|gb|OWZ04935.1|1.883e-5371.19Soluble pyridine nucleotide transhydrogenase [Phyt... [more]
gi|301121324|ref|XP_002908389.1|4.999e-5369.49soluble pyridine nucleotide transhydrogenase, puta... [more]
gi|970661151|gb|KUF98642.1|6.332e-5369.49S-formylglutathione hydrolase [Phytophthora nicoti... [more]
gi|673034632|ref|XP_008871277.1|1.110e-5270.34hypothetical protein H310_07641 [Aphanomyces invad... [more]
gi|567971113|gb|ETK96126.1|1.806e-5269.49hypothetical protein L915_01044 [Phytophthora para... [more]
gi|675163755|ref|XP_008890762.1|1.965e-5269.49hypothetical protein PPTG_00938 [Phytophthora para... [more]
gi|698796506|ref|XP_009831282.1|5.257e-5269.49hypothetical protein, variant 1 [Aphanomyces astac... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7583rna7583Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications