EWM23132.1, cds7547 (CDS) Nannochloropsis gaditana

Overview
NameEWM23132.1
Unique Namecds7547
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:262749..262832 +
Alignment locationCM002472.1:262996..265371 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23132.1
ProductProtein phosphatase 2C, manganese/magnesium aspartate binding site
Orig transcript idgnl|cribi|Naga_100229g5.2609.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:262749..262832 +
CM002472.1supercontigCM002472.1:262996..265371 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005488binding
GO:0043169cation binding
GO:0004722protein serine/threonine phosphatase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006470protein dephosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR000222PP2C_BS
IPR015655PP2C
IPR001932PPM-type_phosphatase_dom
Homology
[Close]
BLAST of EWM23132.1 vs. NCBI_GenBank
Match: gi|585104010|gb|EWM23132.1| (Protein phosphatase 2C, manganese/magnesium aspartate binding site [Nannochloropsis gaditana])

HSP 1 Score: 1663.28 bits (4306), Expect = 0.000e+0
Identity = 819/819 (100.00%), Postives = 819/819 (100.00%), Query Frame = 0 
Query:    1 MASYMPTRQTISSLGQFAPKEDDRRRKQVATSAGSEDESSYVPSLPGVDACSIKCNPQVNIAQGEIGKTSEKVGKLEDEGELGALATESLALVRHKHRPFKPLGSPPEEGNHETSHLRCTTCSLLPSGVPQPPCKGKSLSHLIPAPLSPSSPTLSTTHGDSVTLQEPFLPADVPNPVPANTSTSKDPVSDVCGVLVEGHGGLLSTDLEPTASLPGGAAHLPASGKRQTVVRIKDADTDSESSSTCSTCSGSSASGPPSPSHAPSLASEGLSSLSTTTTVSAASTSSDVSPSGPARGRLEVTKMFLPHESSELEMDEDRDVRPDPGAAAAAAARATAAKLLKIHRDLTPSPPCAEHVRVHPLSLQELALVDESPAHLTSPRLSSPFTQGQVLSCRTGFGKAGRGKAYRGPARQVKGPLVLYGEDVLAEAELVLPPGEDRGGEGRPQWVRVMGVFDGHGLHGKEAARMAAEMFLRDMRRTTMQTLEALLAGDVGGVRRVEEERYRCLEEYLEKELQSPTGGTTGSTVQLLALTGKVFGVVSNVGDSPVLLVETRTGRVQVLTGRHAWDNPEERQRYLARCARMGVMPREVVYGRINCGGMRMTDRNGTQEPLLMYKPGSSEVCTETRDWLCEQVEKRYRNSIGGSQSIRRMVLERLKAGEEEGGEWEVFKALEGHGHMNWGATVLVNGEGKIQMTRSLGDRQEKRAAYIWAEPDVAVFEVGPGEDWTVVACSDGVGDMWYFHELGALATAFFAKKDEAGGEGEREGEVQELAQLILEETIERGEVTPGYGVAPRVFSVVRGEGLKRPLWDDLSVHCARIQT 819
            MASYMPTRQTISSLGQFAPKEDDRRRKQVATSAGSEDESSYVPSLPGVDACSIKCNPQVNIAQGEIGKTSEKVGKLEDEGELGALATESLALVRHKHRPFKPLGSPPEEGNHETSHLRCTTCSLLPSGVPQPPCKGKSLSHLIPAPLSPSSPTLSTTHGDSVTLQEPFLPADVPNPVPANTSTSKDPVSDVCGVLVEGHGGLLSTDLEPTASLPGGAAHLPASGKRQTVVRIKDADTDSESSSTCSTCSGSSASGPPSPSHAPSLASEGLSSLSTTTTVSAASTSSDVSPSGPARGRLEVTKMFLPHESSELEMDEDRDVRPDPGAAAAAAARATAAKLLKIHRDLTPSPPCAEHVRVHPLSLQELALVDESPAHLTSPRLSSPFTQGQVLSCRTGFGKAGRGKAYRGPARQVKGPLVLYGEDVLAEAELVLPPGEDRGGEGRPQWVRVMGVFDGHGLHGKEAARMAAEMFLRDMRRTTMQTLEALLAGDVGGVRRVEEERYRCLEEYLEKELQSPTGGTTGSTVQLLALTGKVFGVVSNVGDSPVLLVETRTGRVQVLTGRHAWDNPEERQRYLARCARMGVMPREVVYGRINCGGMRMTDRNGTQEPLLMYKPGSSEVCTETRDWLCEQVEKRYRNSIGGSQSIRRMVLERLKAGEEEGGEWEVFKALEGHGHMNWGATVLVNGEGKIQMTRSLGDRQEKRAAYIWAEPDVAVFEVGPGEDWTVVACSDGVGDMWYFHELGALATAFFAKKDEAGGEGEREGEVQELAQLILEETIERGEVTPGYGVAPRVFSVVRGEGLKRPLWDDLSVHCARIQT
Sbjct:    1 MASYMPTRQTISSLGQFAPKEDDRRRKQVATSAGSEDESSYVPSLPGVDACSIKCNPQVNIAQGEIGKTSEKVGKLEDEGELGALATESLALVRHKHRPFKPLGSPPEEGNHETSHLRCTTCSLLPSGVPQPPCKGKSLSHLIPAPLSPSSPTLSTTHGDSVTLQEPFLPADVPNPVPANTSTSKDPVSDVCGVLVEGHGGLLSTDLEPTASLPGGAAHLPASGKRQTVVRIKDADTDSESSSTCSTCSGSSASGPPSPSHAPSLASEGLSSLSTTTTVSAASTSSDVSPSGPARGRLEVTKMFLPHESSELEMDEDRDVRPDPGAAAAAAARATAAKLLKIHRDLTPSPPCAEHVRVHPLSLQELALVDESPAHLTSPRLSSPFTQGQVLSCRTGFGKAGRGKAYRGPARQVKGPLVLYGEDVLAEAELVLPPGEDRGGEGRPQWVRVMGVFDGHGLHGKEAARMAAEMFLRDMRRTTMQTLEALLAGDVGGVRRVEEERYRCLEEYLEKELQSPTGGTTGSTVQLLALTGKVFGVVSNVGDSPVLLVETRTGRVQVLTGRHAWDNPEERQRYLARCARMGVMPREVVYGRINCGGMRMTDRNGTQEPLLMYKPGSSEVCTETRDWLCEQVEKRYRNSIGGSQSIRRMVLERLKAGEEEGGEWEVFKALEGHGHMNWGATVLVNGEGKIQMTRSLGDRQEKRAAYIWAEPDVAVFEVGPGEDWTVVACSDGVGDMWYFHELGALATAFFAKKDEAGGEGEREGEVQELAQLILEETIERGEVTPGYGVAPRVFSVVRGEGLKRPLWDDLSVHCARIQT 819
[Close]
BLAST of EWM23132.1 vs. NCBI_GenBank
Match: gi|553184901|ref|XP_005854164.1| (hypothetical protein NGA_0170700 [Nannochloropsis gaditana CCMP526] >gi|422294897|gb|EKU22197.1| hypothetical protein NGA_0170700 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1641.71 bits (4250), Expect = 0.000e+0
Identity = 811/819 (99.02%), Postives = 811/819 (99.02%), Query Frame = 0 
Query:    1 MASYMPTRQTISSLGQFAPKEDDRRRKQVATSAGSEDESSYVPSLPGVDACSIKCNPQVNIAQGEIGKTSEKVGKLEDEGELGALATESLALVRHKHRPFKPLGSPPEEGNHETSHLRCTTCSLLPSGVPQPPCKGKSLSHLIPAPLSPSSPTLSTTHGDSVTLQEPFLPADVPNPVPANTSTSKDPVSDVCGVLVEGHGGLLSTDLEPTASLPGGAAHLPASGKRQTVVRIKDADTDSESSSTCSTCSGSSASGPPSPSHAPSLASEGLSSLSTTTTVSAASTSSDVSPSGPARGRLEVTKMFLPHESSELEMDEDRDVRPDPGAAAAAAARATAAKLLKIHRDLTPSPPCAEHVRVHPLSLQELALVDESPAHLTSPRLSSPFTQGQVLSCRTGFGKAGRGKAYRGPARQVKGPLVLYGEDVLAEAELVLPPGEDRGGEGRPQWVRVMGVFDGHGLHGKEAARMAAEMFLRDMRRTTMQTLEALLAGDVGGVRRVEEERYRCLEEYLEKELQSPTGGTTGSTVQLLALTGKVFGVVSNVGDSPVLLVETRTGRVQVLTGRHAWDNPEERQRYLARCARMGVMPREVVYGRINCGGMRMTDRNGTQEPLLMYKPGSSEVCTETRDWLCEQVEKRYRNSIGGSQSIRRMVLERLKAGEEEGGEWEVFKALEGHGHMNWGATVLVNGEGKIQMTRSLGDRQEKRAAYIWAEPDVAVFEVGPGEDWTVVACSDGVGDMWYFHELGALATAFFAKKDEAGGEGEREGEVQELAQLILEETIERGEVTPGYGVAPRVFSVVRGEGLKRPLWDDLSVHCARIQT 819
            MASYMPTRQTISSLGQFAPKEDDRRRKQVATSAGSEDESSYVPSLPGVDACSIKCNPQVNIAQGEIGKTSEKVGKLEDEGELGALATESLALVRHKHRPFKPLGSPPEEGNHETSHLRCTTCSLLPSGVPQPPCKGKSLSHLIPAPLSPSSPTLSTTHGDSVTLQEPFLPADVPNPVPANTSTSKDPVSDVCGVLVEGHGGLLSTDLEPTASLPGGAAHLPASGKRQTVVRIKDADTDSESSSTCSTCSGSSASGPPSPSHAPSLASEGLSSLSTTTTVSAASTSSDVSPSGPARGRLEVTKMFLPHESSELEMDEDRDVRPDPGAAAAAAARATAAKLLKIHRDLTPSPPCAEHVRVHPLSLQELALVDESPAHLTSPRLSSPFTQGQVLSCRTGFGKAGRGKAYRGPARQVKGPLVLYGEDVLAEAELVLPPGEDRGGEGRPQWVRVMGVFDGHGLHGKEAARMAAEMFLRDMRRTTMQTLEALLAGDVGGVRRVEEERYRCLEEYLEKELQSPTGGTTGSTVQLLALTGKVFGVVSNVGDSPVLLVETRTGRVQVLTGRHAWDNPEERQRYLARCARMGVMPREVVYGRINCGGMRMTDRNGTQEPLLMYKPGSSEVCTETRDWLCEQVEKRYRNSIGGSQSIRRMVLERLKAGEEEGGEWEVFKALEGHGHMNWGATVLVNGEGKIQMTRSLGDRQEKRAAYIWAEPDVAVFEVGPGEDWTVVACSDGVGDMWYFHELGALATAFFAKKDEAGGEG   G     AQLILEETIERGEVTPGYGVAPRVFSVVRGEGLKRPLWDDLSVHCARIQT
Sbjct:    1 MASYMPTRQTISSLGQFAPKEDDRRRKQVATSAGSEDESSYVPSLPGVDACSIKCNPQVNIAQGEIGKTSEKVGKLEDEGELGALATESLALVRHKHRPFKPLGSPPEEGNHETSHLRCTTCSLLPSGVPQPPCKGKSLSHLIPAPLSPSSPTLSTTHGDSVTLQEPFLPADVPNPVPANTSTSKDPVSDVCGVLVEGHGGLLSTDLEPTASLPGGAAHLPASGKRQTVVRIKDADTDSESSSTCSTCSGSSASGPPSPSHAPSLASEGLSSLSTTTTVSAASTSSDVSPSGPARGRLEVTKMFLPHESSELEMDEDRDVRPDPGAAAAAAARATAAKLLKIHRDLTPSPPCAEHVRVHPLSLQELALVDESPAHLTSPRLSSPFTQGQVLSCRTGFGKAGRGKAYRGPARQVKGPLVLYGEDVLAEAELVLPPGEDRGGEGRPQWVRVMGVFDGHGLHGKEAARMAAEMFLRDMRRTTMQTLEALLAGDVGGVRRVEEERYRCLEEYLEKELQSPTGGTTGSTVQLLALTGKVFGVVSNVGDSPVLLVETRTGRVQVLTGRHAWDNPEERQRYLARCARMGVMPREVVYGRINCGGMRMTDRNGTQEPLLMYKPGSSEVCTETRDWLCEQVEKRYRNSIGGSQSIRRMVLERLKAGEEEGGEWEVFKALEGHGHMNWGATVLVNGEGKIQMTRSLGDRQEKRAAYIWAEPDVAVFEVGPGEDWTVVACSDGVGDMWYFHELGALATAFFAKKDEAGGEGGEGGG----AQLILEETIERGEVTPGYGVAPRVFSVVRGEGLKRPLWDDLSVHCARIQT 815
The following BLAST results are available for this feature:
BLAST of EWM23132.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585104010|gb|EWM23132.1|0.000e+0100.00Protein phosphatase 2C, manganese/magnesium aspart... [more]
gi|553184901|ref|XP_005854164.1|0.000e+099.02hypothetical protein NGA_0170700 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7567rna7567Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications