EWM23126.1, cds7546 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23126.1 vs. NCBI_GenBank
Match: gi|553184892|ref|XP_005854162.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >gi|422294895|gb|EKU22195.1| short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >gi|585104004|gb|EWM23126.1| short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 645.195 bits (1663), Expect = 0.000e+0 Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0
Query: 1 MKGGILAFALWGVIFALVPFAVEFLTRKSFPVHTTGAILVTGASTGIGNHAAIHLATHYPDVTVYAGVRKDVDAENIKALHLSNLLPLHIDTTDQSSMDAAVAFLHSTSLPIIGLINNAGVSTNSPIEFLPMAKLRQLLETNVVGPTYLTQQLIPSLRASQGRVVQISSVLGKVTLATRGAYCASKHAFEALSDVLRLELSGPFGVSVSVVEPAYVRTEIFGKIQQEIETLLSPELRSLYGPFFYREDQAARKKAQIAKGDSPVVTSTAIEHALFADYPKTRYVVANFAGVRADLCLFIAWMLPDRLADWLKGMM 315
MKGGILAFALWGVIFALVPFAVEFLTRKSFPVHTTGAILVTGASTGIGNHAAIHLATHYPDVTVYAGVRKDVDAENIKALHLSNLLPLHIDTTDQSSMDAAVAFLHSTSLPIIGLINNAGVSTNSPIEFLPMAKLRQLLETNVVGPTYLTQQLIPSLRASQGRVVQISSVLGKVTLATRGAYCASKHAFEALSDVLRLELSGPFGVSVSVVEPAYVRTEIFGKIQQEIETLLSPELRSLYGPFFYREDQAARKKAQIAKGDSPVVTSTAIEHALFADYPKTRYVVANFAGVRADLCLFIAWMLPDRLADWLKGMM
Sbjct: 1 MKGGILAFALWGVIFALVPFAVEFLTRKSFPVHTTGAILVTGASTGIGNHAAIHLATHYPDVTVYAGVRKDVDAENIKALHLSNLLPLHIDTTDQSSMDAAVAFLHSTSLPIIGLINNAGVSTNSPIEFLPMAKLRQLLETNVVGPTYLTQQLIPSLRASQGRVVQISSVLGKVTLATRGAYCASKHAFEALSDVLRLELSGPFGVSVSVVEPAYVRTEIFGKIQQEIETLLSPELRSLYGPFFYREDQAARKKAQIAKGDSPVVTSTAIEHALFADYPKTRYVVANFAGVRADLCLFIAWMLPDRLADWLKGMM 315
BLAST of EWM23126.1 vs. NCBI_GenBank
Match: gi|585107069|gb|EWM25314.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 253.447 bits (646), Expect = 2.936e-79 Identity = 139/297 (46.80%), Postives = 193/297 (64.98%), Query Frame = 0
Query: 24 FLTRKSFPVHTTG-AILVTGASTGIGNHAAIHLATHYPDVTVYAGVRKDVDAENIKALHLSNLLPLHIDTTDQSSMDAA----VAFLHSTSLPIIGLINNAGVSTNSPIEFLPMAKLRQLLETNVVGPTYLTQQLIPSLRASQGRVVQISSVLGKVTLATRGAYCASKHAFEALSDVLRLELSGPFGVSVSVVEPAYVRTEIFGKIQQEIETL--LSPELRSLYGPFFYREDQAARKKAQIAKGDSPVVTSTAIEHALFADYPKTRYVVANFAGVRADLCLFIAWMLPDRLADWLKG 313
F+ RK FPV G AI++TGASTGIGNHAA HLA VY VRK D E I+AL L NL P+ +D S++ +A L ++P+IGL+NNAGV+ P+EF P+ LR + + +V+GP LTQ+L+P++RA++GR+V +SS+ V L T AY ASK A E +SD LR EL F SVS+V+PAYV T IF K+ Q I+T +SPE+ + YG +F+R ++ + +A + K P VT+ AI HAL + YP TRY+VAN +G+ A ++ W+ PDRLAD++ G
Sbjct: 35 FIFRKRFPVPPKGGAIVITGASTGIGNHAAQHLARQ--GYIVYCTVRKPADVEAIQALGLPNLRPIIMDVAQAKSIENGAETILAELSKNNIPLIGLVNNAGVAQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVD-FDCSVSIVQPAYVNTAIFKKVTQSIDTKVEVSPEIMTTYG-YFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPAFWLGWLVWLCPDRLADFIMG 327
BLAST of EWM23126.1 vs. NCBI_GenBank
Match: gi|553192143|ref|XP_005855521.1| (1-acylglycerone phosphate reductase, partial [Nannochloropsis gaditana CCMP526] >gi|422293540|gb|EKU20840.1| 1-acylglycerone phosphate reductase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 234.572 bits (597), Expect = 4.000e-72 Identity = 131/277 (47.29%), Postives = 180/277 (64.98%), Query Frame = 0
Query: 24 FLTRKSFPVHTTG-AILVTGASTGIGNHAAIHLATHYPDVTVYAGVRKDVDAENIKALHLSNLLPLHIDTTDQSSMDAA----VAFLHSTSLPIIGLINNAGVSTNSPIEFLPMAKLRQLLETNVVGPTYLTQQLIPSLRASQGRVVQISSVLGKVTLATRGAYCASKHAFEALSDVLRLELSGPFGVSVSVVEPAYVRTEIFGKIQQEIETL--LSPELRSLYGPFFYREDQAARKKAQIAKGDSPVVTSTAIEHALFADYPKTRYVVANFAGVRA 293
F+ RK FPV G AI++TGASTGIGNHAA HLA VY VRK D E I+AL L NL P+ +D S++ +A L ++P+IGL+NNAGV+ P+EF P+ LR + + +V+GP LTQ+L+P++RA++GR+V +SS+ V L T AY ASK A E +SD LR EL F SVS+V+PAYV T IF K+ Q I+T +SPE+ + YG +F+R ++ + +A + K P VT+ AI HAL + YP TRY+VAN +G+ A
Sbjct: 43 FIFRKRFPVPPKGGAIVITGASTGIGNHAAQHLARQ--GYIVYCTVRKPADVEAIQALGLPNLRPIIMDVAQAKSIENGAETILAELSKNNIPLIGLVNNAGVAQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVD-FDCSVSIVQPAYVNTAIFKKVTQSIDTKVEVSPEIMTTYG-YFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPA 315
BLAST of EWM23126.1 vs. NCBI_GenBank
Match: gi|514686056|ref|XP_004990606.1| (oxidoreductase [Salpingoeca rosetta] >gi|326431692|gb|EGD77262.1| oxidoreductase [Salpingoeca rosetta]) HSP 1 Score: 219.935 bits (559), Expect = 2.919e-66 Identity = 125/310 (40.32%), Postives = 182/310 (58.71%), Query Frame = 0
Query: 2 KGGILAFALWGVIFALVPFAVEFLTRKSFPVHTTGAILVTGASTGIGNHAAIHLATHYPDVTVYAGVRKDVDAENIKALHLSNLLPLHIDTTDQSSMDAAVAFLHSTSLPIIGLINNAGVSTNSPIEFLPMAKLRQLLETNVVGPTYLTQQLIPSLRASQGRVVQISSVLGKVTLATRGAYCASKHAFEALSDVLRLELSGPFGVSVSVVEPAYVRTEIFGKIQQEIETL--LSPELRSLYGPFFYREDQAARKKAQIAKGDSPVVTSTAIEHALFADYPKTRYVVANFAGVRADLCLFIAWMLPDRLAD 309
K G+L L +++ L F V++ FPVH +GAIL+TG STGIG HAA+ LA TVYA VRK D +++K ++ L+P+ +D T + +AV + +IGL+NNAG+S P+E + ++R + E NV G +TQ +P +R ++GR+V + S+ G + + +Y A+K E L+D LR E++ PFGVSVS+VEPAYV T I K E +S E++ Y FF ++ K +A D P VT+ AI HAL + P+TRY+VAN G+ A + I W+LPDRL D
Sbjct: 5 KPGVLMGILAVLLYLLFVFPVKY-----FPVHDSGAILITGTSTGIGRHAAVELAKK--GYTVYATVRKQADVDSLKKEGVNTLIPIVMDVTKPDQIASAVDTIKKGGHKLIGLVNNAGISARVPLEAHDLDRIRSMFEVNVFGVVSVTQAFLPMIRENKGRIVNVGSLAGFIAMPGSASYSATKFGLEGLNDALRREMA-PFGVSVSIVEPAYVSTAIASKSTGEAAATRWVSREMQDTYAWFFADFEEKRLKGEALA--DGPEVTTKAITHALTSRTPETRYIVANTYGIPAKIAALINWLLPDRLGD 304
BLAST of EWM23126.1 vs. NCBI_GenBank
Match: gi|553181318|ref|XP_005853543.1| (3-hydroxybutyrate dehydrogenase [Nannochloropsis gaditana CCMP526] >gi|422295513|gb|EKU22812.1| 3-hydroxybutyrate dehydrogenase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 219.935 bits (559), Expect = 3.366e-66 Identity = 140/323 (43.34%), Postives = 184/323 (56.97%), Query Frame = 0
Query: 4 GILAFALWGVIFALVPFAVEFLTRKSFPVHT-TGAILVTGASTGIGNHAAIHLATHYPDVTVYAGVRKDVDAENIKAL-----HLSNLLPLHIDTTDQSSMDAAVAFLHST-----SLPIIGLINNAGVS-TNSPIEFLPMAKLRQLLETNVVGPTYLTQQLIPSLRASQGRVVQISSVLGKVTLATRGAYCASKHAFEALSDVLRLELSGPFGVSVSVVEPAYVRTEIFGKIQ---QEIETLLSPELRSLYGPFFYREDQAARKKAQIAKGDSPVVTSTAIEHALFADYPKTRYVVANFAGVRADLCLFIAWMLPDRLADWL 311
GI AL A +P+ ++ TR+ +PV GA++VTGASTGIG HAA LA V+AGVRK++D E +KA N++P+ +D T Q +D AV + ST P++GL+NNAGV +N P+EF M LR L + N G T+ + LRAS+GRV+ ISS+ G YCASK A EA SD LR+E+ G GVSVSVVEPAYV + IFGKI +E +S ++ +YG R I K P VTS AI HAL A +P+TRYVVAN G+ A + ++ WM DR+ D L
Sbjct: 3 GIRFSALLVAFLASIPYLLDLATRREYPVPPPEGAVVVTGASTGIGAHAAHSLA--RAGFLVFAGVRKELDGETLKAEAPTLESQENIVPIILDVTKQEQIDKAVQTVSSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLRASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEM-GELGVSVSVVEPAYVTSAIFGKIATRVKETADSVSEKVMEVYGHLVQNPTYTRR---CIEKASPPTVTSDAILHALTAKHPQTRYVVANVDGLSAKVIGWMIWMFNDRIKDKL 319
BLAST of EWM23126.1 vs. NCBI_GenBank
Match: gi|585102158|gb|EWM21817.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 216.853 bits (551), Expect = 4.945e-65 Identity = 139/323 (43.03%), Postives = 183/323 (56.66%), Query Frame = 0
Query: 4 GILAFALWGVIFALVPFAVEFLTRKSFPVHT-TGAILVTGASTGIGNHAAIHLATHYPDVTVYAGVRKDVDAENIKAL-----HLSNLLPLHIDTTDQSSMDAAVAFLHST-----SLPIIGLINNAGVS-TNSPIEFLPMAKLRQLLETNVVGPTYLTQQLIPSLRASQGRVVQISSVLGKVTLATRGAYCASKHAFEALSDVLRLELSGPFGVSVSVVEPAYVRTEIFGKI---QQEIETLLSPELRSLYGPFFYREDQAARKKAQIAKGDSPVVTSTAIEHALFADYPKTRYVVANFAGVRADLCLFIAWMLPDRLADWL 311
GI AL A +P+ ++ TR+ +PV GA++VTGASTGIG HAA LA V+AGVRK++D E +KA N++P+ +D T Q +D AV + ST P++GL+NNAGV +N P+EF M LR L + N G T+ + LRAS+GRV+ ISS+ G YCASK A EA SD LR+E+ G GVSVSVVEPAYV + IFGKI +E +S ++ +YG R I K P VTS AI AL A +P+TRYVVAN G+ A + ++ WM DR+ D L
Sbjct: 3 GIRFSALLVAFLASIPYLLDLATRREYPVPPPEGAVVVTGASTGIGAHAAHSLART--GFLVFAGVRKELDGETLKAEAPTLESQENIVPIILDVTKQEQIDKAVQTVSSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLRASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEM-GELGVSVSVVEPAYVTSAIFGKIATRMKETADSVSEKVMEVYGHLVQNPTYTRR---CIEKASPPTVTSDAILDALTAKHPQTRYVVANVDGLSAKVIGWMIWMFNDRIKDKL 319
BLAST of EWM23126.1 vs. NCBI_GenBank
Match: gi|553192526|ref|XP_005855590.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >gi|422293482|gb|EKU20782.1| short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 214.157 bits (544), Expect = 4.165e-64 Identity = 124/297 (41.75%), Postives = 183/297 (61.62%), Query Frame = 0
Query: 23 EFLTRKSFPVHTTG--AILVTGASTGIGNHAAIHLATHYPDVTVYAGVRKDVDAENIKALHLSNLLPLHIDTTDQSSMDAAVAFLHSTS----LPIIGLINNAGVSTNSPIEFLPMAKLRQLLETNVVGPTYLTQQLIPSLRASQGRVVQISSVLGKVTLATRGAYCASKHAFEALSDVLRLELSGPFGVSVSVVEPAYVRTEIFGKIQQEIETLLSPELRSL--YGPFFYREDQAARKKAQIAKGDSPVVTSTAIEHALFADYPKTRYVVANFAGVRADLCLFIAWMLPDRLADWL 311
+ +R+ +P +G A++++GASTGIG AA+HLA D VYAGVRK+ DAE ++++ S L+P+ +D T Q S+D A + + + +P+ GL+NNAG+ T S +E +A ++++ + NV G LTQ+ +P LRA GR+VQISS+ G +T+ YC+SKHA E+LSD LRLEL+ + VSV+VV+P VR+ IF K Q + L+ + R L YG + + +AK D+P T+ AI AL YPKTR VVAN G+ A ++ MLPDR+ D +
Sbjct: 19 NYASRREYPTPPSGGAAVVLSGASTGIGYDAAVHLAD---DFVVYAGVRKEKDAEMLRSVGKSTLVPVILDVTSQDSIDEAYVKITADAAERGIPVWGLVNNAGIMTASTVEHHDVAGMQKIYDVNVWGVLRLTQKFLPLLRAQAGRIVQISSIAGFLTIPRASGYCSSKHALESLSDGLRLELAH-YNVSVTVVQPGAVRSAIFEKSQSASQAKLAEDPRELKVYGHMI----KEGSTDSIMAKADTPDCTTKAIRQALMDRYPKTREVVANIDGLPAIFAHYMKHMLPDRVLDKM 307
BLAST of EWM23126.1 vs. NCBI_GenBank
Match: gi|167525509|ref|XP_001747089.1| (hypothetical protein [Monosiga brevicollis MX1] >gi|163774384|gb|EDQ88013.1| predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 212.616 bits (540), Expect = 1.780e-63 Identity = 122/299 (40.80%), Postives = 171/299 (57.19%), Query Frame = 0
Query: 13 VIFALVPFAVEFLTRKSFPVHTTGAILVTGASTGIGNHAAIHLATHYPDVTVYAGVRKDVDAENIKALHLSNLLPLHIDTTDQSSMDAAVAFLHSTSLPIIGLINNAGVSTNSPIEFLPMAKLRQLLETNVVGPTYLTQQLIPSLRASQGRVVQISSVLGKVTLATRGAYCASKHAFEALSDVLRLELSGPFGVSVSVVEPAYVRTEIFGKIQ--QEIETLLSPELRSLYGPFFYREDQAARKKAQIAKGDSPVVTSTAIEHALFADYPKTRYVVANFAGVRADLCLFIAWMLPDRLAD 309
V+ A +AV L R ++ VH G +LVTGAS+GIG HAAI LA VY VRK+ DA +I+ L + L P+ +D T+ + AV + P+I L+NNAG+S+ +P+E M ++R E N+ G TQ +P LRA++GR++ I SV G V + Y +K A E +SD LR EL P GVSVS+VEPAYV+TEI K Q E S E+ +Y FF D+ +++ D+P T+ AI A+ + P+TRYVVAN + A + + W+LPDR D
Sbjct: 10 VVLAAALYAVWELPRPTYHVHEQGVVLVTGASSGIGRHAAIELAK--LGYEVYGTVRKERDANDIRGLGIKTLHPIIMDVTNSEQIKNAVETISKLDQPLIALVNNAGISSRAPLEAYDMNRVRNTFEVNIFGLVETTQAFLPLLRANKGRIINIGSVAGLVGMEGSAVYSGTKFALEGISDSLRRELF-PLGVSVSLVEPAYVKTEIVHKSSGAQSAEHWASKEMLEVYDHFFSVADE--KRQRAFEHADTPECTTNAIVDAIRSPQPRTRYVVANTHKIPAWITTGMTWLLPDRAVD 303
BLAST of EWM23126.1 vs. NCBI_GenBank
Match: gi|585105737|gb|EWM24343.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 213.772 bits (543), Expect = 6.626e-63 Identity = 125/297 (42.09%), Postives = 181/297 (60.94%), Query Frame = 0
Query: 23 EFLTRKSFPVHTTG--AILVTGASTGIGNHAAIHLATHYPDVTVYAGVRKDVDAENIKALHLSNLLPLHIDTTDQSSMDAA----VAFLHSTSLPIIGLINNAGVSTNSPIEFLPMAKLRQLLETNVVGPTYLTQQLIPSLRASQGRVVQISSVLGKVTLATRGAYCASKHAFEALSDVLRLELSGPFGVSVSVVEPAYVRTEIFGKIQQEIETLLSPELRSL--YGPFFYREDQAARKKAQIAKGDSPVVTSTAIEHALFADYPKTRYVVANFAGVRADLCLFIAWMLPDRLADWL 311
+ +R+ +P +G A++++GASTGIG AA+HLA D VYAGVRK+ DAE ++++ S L+P+ +D T Q S+D A A +P+ GL+NNAG+ T S +E +A ++++ + NV G LTQ+ +P LRA GR+VQISS+ G +T+ YC+SKHA E+LSD LRLEL+ + VSV+VV+P VR+ IF K Q + L+ + R L YG + + +AK D+P T+ AI AL YPKTR VVAN G+ A ++ MLPDR+ D +
Sbjct: 111 NYASRREYPTPPSGGAAVVLSGASTGIGYDAAVHLAD---DFVVYAGVRKEKDAEMLRSVGKSTLVPVILDVTSQDSIDEAYVKITADAAERGIPVWGLVNNAGIMTASTVEHHDVAGMQKIYDVNVWGVLRLTQKFLPLLRAQAGRIVQISSIAGFLTIPRASGYCSSKHALESLSDGLRLELAH-YNVSVTVVQPGAVRSAIFEKSQSASQAKLAEDPRELKVYGHMI----KEGSTDSIMAKADTPDCTTKAIRQALMDRYPKTREVVANIDGLPAIFAHYMKHMLPDRVLDKM 399
BLAST of EWM23126.1 vs. NCBI_GenBank
Match: gi|1210211457|dbj|BAZ30497.1| (short-chain dehydrogenase/reductase SDR [Cylindrospermum sp. NIES-4074]) HSP 1 Score: 199.519 bits (506), Expect = 9.385e-59 Identity = 119/294 (40.48%), Postives = 177/294 (60.20%), Query Frame = 0
Query: 24 FLTRKSFPVHTTGAILVTGASTGIGNHAAIHLATHYPDVTVYAGVRKDVDAENIKALHLSNLLPLHIDTTDQSSMDAAVAFLHST--SLPIIGLINNAGVSTNSPIEFLPMAKLRQLLETNVVGPTYLTQQLIPSLRASQGRVVQISSVLGKVTLATRGAYCASKHAFEALSDVLRLELSGPFGVSVSVVEPAYVRTEIFGKIQQEIETL---LSPELRSLYGPFFYREDQAARKKAQIAKGDSPV-VTSTAIEHALFADYPKTRYVVANFAGVRADLCLFIAWMLPDRLADWL 311
+++KSF TG+++++GAS+GIG AI+L V+AGVR D D E +K L P+ +D T++ S+ AA + +T S + GL+NNAG+ P+EFLP+A LR+ E NV+G +TQ +P LR SQGR++ +SS GKV++ G+YCASK A EAL+D LR+EL P+G++V ++EP V T I+ K + + + L PE RSLY F D A +K +++ P V + A+ HAL PK RYVV G+ A + +++A +LPD + D L
Sbjct: 1 MVSKKSF----TGSVVISGASSGIGEACAIYL--DKLGYQVFAGVRSDADGEALKCKTSERLTPIFLDVTNEVSIIAAANRIKATLDSTGLTGLVNNAGIVIAGPLEFLPVADLREQFEINVIGQIAVTQAFLPLLRESQGRIINMSSDNGKVSIPFLGSYCASKFALEALTDALRIELQ-PWGIAVCIIEPGSVTTPIWKKSISKADNIWNNLPPEARSLYSVFV---DSAHKKANELSNNGFPAEVVAKAVAHALTTKRPKIRYVV----GLDAKINIWLAKILPDWILDKL 280 The following BLAST results are available for this feature:
BLAST of EWM23126.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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