EWM23131.1, cds7542 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23131.1 vs. NCBI_GenBank
Match: gi|585104009|gb|EWM23131.1| (40s ribosomal protein s9 [Nannochloropsis gaditana]) HSP 1 Score: 523.087 bits (1346), Expect = 0.000e+0 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0
Query: 1 MFYKPTCEWFVVKSMSMDHGVLWGRRNQAFGQGTMHPPTLLSFPTTRTTITGSSMPSIAFRRNYRKTDKTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKIRKAARELLTLDEKDPRRVFEGPALLRRCVRAGLLEQDKAELDFVLQLTTQKLLERRLQTKVFKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRVARRREAQRAAAAGGGGADDDAGEESE 254
MFYKPTCEWFVVKSMSMDHGVLWGRRNQAFGQGTMHPPTLLSFPTTRTTITGSSMPSIAFRRNYRKTDKTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKIRKAARELLTLDEKDPRRVFEGPALLRRCVRAGLLEQDKAELDFVLQLTTQKLLERRLQTKVFKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRVARRREAQRAAAAGGGGADDDAGEESE
Sbjct: 1 MFYKPTCEWFVVKSMSMDHGVLWGRRNQAFGQGTMHPPTLLSFPTTRTTITGSSMPSIAFRRNYRKTDKTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKIRKAARELLTLDEKDPRRVFEGPALLRRCVRAGLLEQDKAELDFVLQLTTQKLLERRLQTKVFKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRVARRREAQRAAAAGGGGADDDAGEESE 254
BLAST of EWM23131.1 vs. NCBI_GenBank
Match: gi|553178832|ref|XP_005852611.1| (small subunit ribosomal protein S9e [Nannochloropsis gaditana CCMP526] >gi|422295924|gb|EKU23223.1| small subunit ribosomal protein S9e [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 404.06 bits (1037), Expect = 1.637e-141 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
Query: 55 MPSIAFRRNYRKTDKTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKIRKAARELLTLDEKDPRRVFEGPALLRRCVRAGLLEQDKAELDFVLQLTTQKLLERRLQTKVFKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRVARRREAQRAAAAGGGGADDDAGEESE 254
MPSIAFRRNYRKTDKTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKIRKAARELLTLDEKDPRRVFEGPALLRRCVRAGLLEQDKAELDFVLQLTTQKLLERRLQTKVFKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRVARRREAQRAAAAGGGGADDDAGEESE
Sbjct: 1 MPSIAFRRNYRKTDKTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKIRKAARELLTLDEKDPRRVFEGPALLRRCVRAGLLEQDKAELDFVLQLTTQKLLERRLQTKVFKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRVARRREAQRAAAAGGGGADDDAGEESE 200
BLAST of EWM23131.1 vs. NCBI_GenBank
Match: gi|299469776|emb|CBN76630.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 300.056 bits (767), Expect = 1.583e-100 Identity = 153/194 (78.87%), Postives = 169/194 (87.11%), Query Frame = 0
Query: 55 MPSIAFRRNYRKTDKTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKIRKAARELLTLDEKDPRRVFEGPALLRRCVRAGLLEQDKAELDFVLQLTTQKLLERRLQTKVFKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRVARRREAQRAAAAGGGGADDD 248
MP + RNYRKT KTPRRP+EKERLD ELKLCGEYGLRCK EIWRVQFALAKIRKAAR+LLTLD KDP+R+FEGPALLRR R GLL +D+ ELDFVLQLTT+K+LERRLQTKVFKQ LAKSIHHARVLI+ RHIRVGKQLVN+P F+VR+DSEKHIDFS TSPYGQGR GRVAR+R A +AAA G G + D
Sbjct: 1 MPKVGIHRNYRKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMSRFGLLGEDEKELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKHIDFSITSPYGQGRPGRVARKRAASKAAAGGDDGEESD 194
BLAST of EWM23131.1 vs. NCBI_GenBank
Match: gi|673044957|ref|XP_008876439.1| (ribosomal protein S4 [Aphanomyces invadans] >gi|574467827|gb|ETV94848.1| ribosomal protein S4 [Aphanomyces invadans]) HSP 1 Score: 285.034 bits (728), Expect = 1.400e-94 Identity = 149/194 (76.80%), Postives = 170/194 (87.63%), Query Frame = 0
Query: 55 MPSIAFRRNYRKTDKTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKIRKAARELLTLDEKDPRRVFEGPALLRRCVRAGLLEQDKAELDFVLQLTTQKLLERRLQTKVFKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRVARRREAQRAAAAGGGGADDD 248
MP I+ RNYRKT +TP R FEKERLDQE+KL GEYGLRCK EIWRVQ+ LAK+RKAAR+LLTLD KDP+R+FEGPAL+RR R GLL +D+ ELDFVLQ+ TQKLLERRLQTKVFKQ LAKSIHHAR LI+QRHIRVG+QLV++PSF+VR+DSEKHIDFS TSPYGQGR GRVAR+R AQRAAAA GG ++D
Sbjct: 1 MPKISRHRNYRKTYRTPSRAFEKERLDQEMKLLGEYGLRCKREIWRVQYTLAKLRKAARQLLTLDPKDPKRLFEGPALMRRLKRYGLLAEDENELDFVLQMNTQKLLERRLQTKVFKQGLAKSIHHARTLIKQRHIRVGRQLVDVPSFMVRLDSEKHIDFSVTSPYGQGRPGRVARKRAAQRAAAANGGAEEED 194
BLAST of EWM23131.1 vs. NCBI_GenBank
Match: gi|698826682|ref|XP_009846369.1| (ribosomal protein S4 [Aphanomyces astaci] >gi|574098404|gb|ETV64145.1| ribosomal protein S4 [Aphanomyces astaci]) HSP 1 Score: 283.108 bits (723), Expect = 7.971e-94 Identity = 149/194 (76.80%), Postives = 169/194 (87.11%), Query Frame = 0
Query: 55 MPSIAFRRNYRKTDKTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKIRKAARELLTLDEKDPRRVFEGPALLRRCVRAGLLEQDKAELDFVLQLTTQKLLERRLQTKVFKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRVARRREAQRAAAAGGGGADDD 248
MP I+ RNYRKT +TP R FEKERLDQE+KL GEYGLRCK EIWRVQ+ LAK+RKAAR+LLTLD KDP+R+FEGPAL+RR R GLL D+ ELDFVLQ+ TQKLLERRLQTKVFKQ LAKSIHHAR LI+QRHIRVG+QLV++PSF+VR+DSEKHIDFS TSPYGQGR GRVAR+R AQRAAAA GG ++D
Sbjct: 1 MPKISRHRNYRKTYRTPSRAFEKERLDQEMKLLGEYGLRCKREIWRVQYTLAKLRKAARQLLTLDPKDPKRLFEGPALIRRLKRYGLLADDENELDFVLQMNTQKLLERRLQTKVFKQGLAKSIHHARTLIKQRHIRVGRQLVDVPSFMVRLDSEKHIDFSVTSPYGQGRPGRVARKRAAQRAAAANGGADEED 194
BLAST of EWM23131.1 vs. NCBI_GenBank
Match: gi|970647675|gb|KUF87430.1| (hypothetical protein AM588_10003515 [Phytophthora nicotianae]) HSP 1 Score: 282.337 bits (721), Expect = 1.362e-93 Identity = 140/194 (72.16%), Postives = 159/194 (81.96%), Query Frame = 0
Query: 55 MPSIAFRRNYRKTDKTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKIRKAARELLTLDEKDPRRVFEGPALLRRCVRAGLLEQDKAELDFVLQLTTQKLLERRLQTKVFKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRVARRREAQRAAAAGGGGADDD 248
MP I+ RNYRKT +TP R FEKERLDQELKL GEYGLRCK EIWRVQ+AL+K+RKAARELLTLD KDP+R+FEG ALLRR R G+L +D+ ELDFVL+L QKLLERRLQTKVFKQ+LAKSIHHARVLI+QRHIRVGKQLV++PSFLVR+DSEKHIDF+ TSPYGQGR A A GG +D+
Sbjct: 1 MPKISRHRNYRKTYRTPSRAFEKERLDQELKLLGEYGLRCKREIWRVQYALSKLRKAARELLTLDPKDPKRLFEGSALLRRLKRYGMLAEDENELDFVLRLNVQKLLERRLQTKVFKQNLAKSIHHARVLIKQRHIRVGKQLVDVPSFLVRMDSEKHIDFAVTSPYGQGRPA-------ASPVVRAAAGGEEDE 187
BLAST of EWM23131.1 vs. NCBI_GenBank
Match: gi|669165192|ref|XP_008618158.1| (30S ribosomal protein S4 [Saprolegnia diclina VS20] >gi|813198564|ref|XP_012208865.1| 30S ribosomal protein S4 [Saprolegnia parasitica CBS 223.65] >gi|530730268|gb|EQC28510.1| 30S ribosomal protein S4 [Saprolegnia diclina VS20] >gi|641526008|gb|KDO20408.1| 30S ribosomal protein S4 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 280.026 bits (715), Expect = 1.477e-92 Identity = 150/194 (77.32%), Postives = 167/194 (86.08%), Query Frame = 0
Query: 55 MPSIAFRRNYRKTDKTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKIRKAARELLTLDEKDPRRVFEGPALLRRCVRAGLLEQDKAELDFVLQLTTQKLLERRLQTKVFKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRVARRREAQRAAAAGGGGADDD 248
MP I+ RNYRKT +TP R F KERLDQELKL GEYGLRCK EIWRVQF LAK+RKAAR+LLTLD KDP+R+FEGPAL+RR R GLL D+ ELDFVL+L QKLLERRLQTKVFKQ LAKSIHHAR LI+QRHIRVG+QLV++PSF+VR+DSEKHIDFS TSPYGQGR GRVAR+R AQRAAAA GG +DD
Sbjct: 1 MPKISRHRNYRKTYRTPTRAFGKERLDQELKLVGEYGLRCKREIWRVQFTLAKLRKAARQLLTLDAKDPKRLFEGPALMRRLKRYGLLADDENELDFVLRLNIQKLLERRLQTKVFKQGLAKSIHHARCLIKQRHIRVGRQLVDVPSFMVRLDSEKHIDFSVTSPYGQGRPGRVARKRAAQRAAAANGGAEEDD 194
BLAST of EWM23131.1 vs. NCBI_GenBank
Match: gi|397635346|gb|EJK71823.1| (hypothetical protein THAOC_06697 [Thalassiosira oceanica]) HSP 1 Score: 278.1 bits (710), Expect = 5.332e-92 Identity = 139/174 (79.89%), Postives = 147/174 (84.48%), Query Frame = 0
Query: 55 MPSIAFRRNYRKTDKTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKIRKAARELLTLDEKDPRRVFEGPALLRRCVRAGLLEQDKAELDFVLQLTTQKLLERRLQTKVFKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRV 228
MP+ A RNYRKT KTPRRP+EKERLD ELKL GEYGLRCK EIWRVQ+ALAK+RKAAR LLTLD KDP+R+FEG ALLRR R GLL D+ ELDFVLQLTTQKLLERRLQTKVFKQ LAKSIHHARVLIRQRHI VG QLVN+PSF VR SEKHID S SPYGQG GRV
Sbjct: 1 MPTNAQHRNYRKTYKTPRRPYEKERLDAELKLVGEYGLRCKREIWRVQYALAKLRKAARVLLTLDPKDPKRIFEGAALLRRMSRYGLLADDELELDFVLQLTTQKLLERRLQTKVFKQGLAKSIHHARVLIRQRHISVGGQLVNVPSFNVRTSSEKHIDISANSPYGQGAPGRV 174
BLAST of EWM23131.1 vs. NCBI_GenBank
Match: gi|1173926627|gb|OQR80807.1| (40S ribosomal protein S9-1 [Achlya hypogyna]) HSP 1 Score: 280.796 bits (717), Expect = 8.933e-92 Identity = 150/194 (77.32%), Postives = 167/194 (86.08%), Query Frame = 0
Query: 55 MPSIAFRRNYRKTDKTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKIRKAARELLTLDEKDPRRVFEGPALLRRCVRAGLLEQDKAELDFVLQLTTQKLLERRLQTKVFKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRVARRREAQRAAAAGGGGADDD 248
MP I+ RNYRKT +TP R F KERLDQELKL GEYGLRCK EIWRVQF LAK+RKAAR+LLTLD KDP+R+FEGPAL+RR R GLL D+ ELDFVL+L QKLLERRLQTKVFKQ LAKSIHHAR LI+QRHIRVG+QLV++PSF+VR+DSEKHIDFS TSPYGQGR GRVAR+R AQRAAAA GG +DD
Sbjct: 1 MPKISRHRNYRKTYRTPTRAFGKERLDQELKLVGEYGLRCKREIWRVQFTLAKLRKAARQLLTLDAKDPKRLFEGPALMRRLKRYGLLADDENELDFVLRLNIQKLLERRLQTKVFKQGLAKSIHHARCLIKQRHIRVGRQLVDVPSFMVRLDSEKHIDFSVTSPYGQGRPGRVARKRAAQRAAAANGGEEEDD 194
BLAST of EWM23131.1 vs. NCBI_GenBank
Match: gi|676390645|ref|XP_009038600.1| (hypothetical protein AURANDRAFT_28757 [Aureococcus anophagefferens] >gi|323450976|gb|EGB06855.1| hypothetical protein AURANDRAFT_28757 [Aureococcus anophagefferens]) HSP 1 Score: 277.715 bits (709), Expect = 1.036e-91 Identity = 134/170 (78.82%), Postives = 149/170 (87.65%), Query Frame = 0
Query: 55 MPSIAFRRNYRKTDKTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKIRKAARELLTLDEKDPRRVFEGPALLRRCVRAGLLEQDKAELDFVLQLTTQKLLERRLQTKVFKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGR 224
MP +F RNYRKT KTPRRPFEKER+D ELKL GEYGLRCK E+WR Q ALAK+RKAAR LLTLD KDP R+FE PALLRR R GLL++ + ELD VLQ+TTQ+LLERRLQTKVFKQ LAKSIHHARVLI+QRHIRVGKQ+VN+PSFLVR+DSEKHIDF+ TSPYGQGR
Sbjct: 1 MPKTSFLRNYRKTSKTPRRPFEKERIDGELKLVGEYGLRCKRELWRTQLALAKLRKAARTLLTLDTKDPARMFEAPALLRRLQRYGLLDETELELDAVLQMTTQRLLERRLQTKVFKQGLAKSIHHARVLIKQRHIRVGKQVVNVPSFLVRLDSEKHIDFAITSPYGQGR 170 The following BLAST results are available for this feature:
BLAST of EWM23131.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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