EWM23146.1, cds7509 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23146.1 vs. NCBI_GenBank
Match: gi|585104027|gb|EWM23146.1| (tricarboxylate transport mitochondrial-like protein [Nannochloropsis gaditana]) HSP 1 Score: 645.966 bits (1665), Expect = 0.000e+0 Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0
Query: 1 MPLHLCLPGVWQACQLKQHYALNAFTGPLDCVRFTLRTKGPLGLYKGLTPWLVFAFPRSAVRFSTYEFVSQRFRETVSKESQEGELQNGKLDPYLSMAAGSIAGAVEFLTVGTPMQCIQVKMAHDAYSKVPRFHGFVSAIVGIVRAEGLLKGLYAGLGPTVLKGAVNNCIRFSTFSELKYIYQKYKLNVADNRLTATFENFSTCPESDHFQAVHEAILNPLETMLLGATSGGLSAIATHPIDTVKSNMQSLSADKYTSSWNCFLSILRNQGLPGLYQGMAPRFVRVSLEIGLHFSLYEQIACRIDESLFN 310
MPLHLCLPGVWQACQLKQHYALNAFTGPLDCVRFTLRTKGPLGLYKGLTPWLVFAFPRSAVRFSTYEFVSQRFRETVSKESQEGELQNGKLDPYLSMAAGSIAGAVEFLTVGTPMQCIQVKMAHDAYSKVPRFHGFVSAIVGIVRAEGLLKGLYAGLGPTVLKGAVNNCIRFSTFSELKYIYQKYKLNVADNRLTATFENFSTCPESDHFQAVHEAILNPLETMLLGATSGGLSAIATHPIDTVKSNMQSLSADKYTSSWNCFLSILRNQGLPGLYQGMAPRFVRVSLEIGLHFSLYEQIACRIDESLFN
Sbjct: 1 MPLHLCLPGVWQACQLKQHYALNAFTGPLDCVRFTLRTKGPLGLYKGLTPWLVFAFPRSAVRFSTYEFVSQRFRETVSKESQEGELQNGKLDPYLSMAAGSIAGAVEFLTVGTPMQCIQVKMAHDAYSKVPRFHGFVSAIVGIVRAEGLLKGLYAGLGPTVLKGAVNNCIRFSTFSELKYIYQKYKLNVADNRLTATFENFSTCPESDHFQAVHEAILNPLETMLLGATSGGLSAIATHPIDTVKSNMQSLSADKYTSSWNCFLSILRNQGLPGLYQGMAPRFVRVSLEIGLHFSLYEQIACRIDESLFN 310
BLAST of EWM23146.1 vs. NCBI_GenBank
Match: gi|585104026|gb|EWM23145.1| (tricarboxylate transport mitochondrial-like protein [Nannochloropsis gaditana]) HSP 1 Score: 640.573 bits (1651), Expect = 0.000e+0 Identity = 310/317 (97.79%), Postives = 310/317 (97.79%), Query Frame = 0
Query: 1 MPLHLCLPGVWQA-------CQLKQHYALNAFTGPLDCVRFTLRTKGPLGLYKGLTPWLVFAFPRSAVRFSTYEFVSQRFRETVSKESQEGELQNGKLDPYLSMAAGSIAGAVEFLTVGTPMQCIQVKMAHDAYSKVPRFHGFVSAIVGIVRAEGLLKGLYAGLGPTVLKGAVNNCIRFSTFSELKYIYQKYKLNVADNRLTATFENFSTCPESDHFQAVHEAILNPLETMLLGATSGGLSAIATHPIDTVKSNMQSLSADKYTSSWNCFLSILRNQGLPGLYQGMAPRFVRVSLEIGLHFSLYEQIACRIDESLFN 310
MPLHLCLPGVWQA CQLKQHYALNAFTGPLDCVRFTLRTKGPLGLYKGLTPWLVFAFPRSAVRFSTYEFVSQRFRETVSKESQEGELQNGKLDPYLSMAAGSIAGAVEFLTVGTPMQCIQVKMAHDAYSKVPRFHGFVSAIVGIVRAEGLLKGLYAGLGPTVLKGAVNNCIRFSTFSELKYIYQKYKLNVADNRLTATFENFSTCPESDHFQAVHEAILNPLETMLLGATSGGLSAIATHPIDTVKSNMQSLSADKYTSSWNCFLSILRNQGLPGLYQGMAPRFVRVSLEIGLHFSLYEQIACRIDESLFN
Sbjct: 1 MPLHLCLPGVWQAVRTNAIHCQLKQHYALNAFTGPLDCVRFTLRTKGPLGLYKGLTPWLVFAFPRSAVRFSTYEFVSQRFRETVSKESQEGELQNGKLDPYLSMAAGSIAGAVEFLTVGTPMQCIQVKMAHDAYSKVPRFHGFVSAIVGIVRAEGLLKGLYAGLGPTVLKGAVNNCIRFSTFSELKYIYQKYKLNVADNRLTATFENFSTCPESDHFQAVHEAILNPLETMLLGATSGGLSAIATHPIDTVKSNMQSLSADKYTSSWNCFLSILRNQGLPGLYQGMAPRFVRVSLEIGLHFSLYEQIACRIDESLFN 317
BLAST of EWM23146.1 vs. NCBI_GenBank
Match: gi|299473559|emb|CBN77954.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 199.134 bits (505), Expect = 1.227e-58 Identity = 125/279 (44.80%), Postives = 164/279 (58.78%), Query Frame = 0
Query: 25 FTGPLDCVRFTLRTKGPLGLYKGLTPWLVFAFPRSAVRFSTYEFVSQRFRETVSKESQEGELQNGKLDPYLSMAAGSIAGAVEFLTVGTPMQCIQVKMAHDAYSKVPRFHGFVSAIVGIVRAEGLLKGLYAGLGPTVLKGAVNNCIRFSTFSELKYIYQKYKLNVADNRLTATFENFSTCPESDHFQAVHEAILNPLETMLLGATSGGLSAIATHPIDTVKSNMQSLSADKYTSSWNCFLSILRNQGLPGLYQGMAPRFVRVSLEIGLHFSLYEQIACR 303
F GPL C TLR G LGLY GL PWL FA PRSA+RF+T+E VS+ QEG+ GKLD ++AAG++AGA+E T TP+Q IQ+KM GFV A+ I+R EGL G ++GL PTV+KGAVNNCIRF ++E ++ +C +S + L +GA +G +SA+ THPIDTVKSN+Q LSA KY+ S +C I+ + G+ GL++G++PR RV LEIGL FSLY+ I CR
Sbjct: 62 FKGPLHCATQTLRHSGILGLYVGLPPWLTFALPRSAIRFTTFERVSEWL--------QEGQ---GKLDAVNALAAGTVAGAIESATCLTPLQNIQIKMMQMD-------RGFVYALGEILRREGLRNGFFSGLWPTVVKGAVNNCIRFGLYNETAAALRR------------------SCGDSP------DEALAAGAVFGIGAAAGAVSAVVTHPIDTVKSNLQGLSAGKYSGSLDCARKIIASSGVSGLFRGLSPRICRVCLEIGLQFSLYDSI-CR 297
BLAST of EWM23146.1 vs. NCBI_GenBank
Match: gi|694536938|ref|XP_009495747.1| (solute carrier family 25, member 46 [Fonticula alba] >gi|627948202|gb|KCV70141.1| solute carrier family 25, member 46 [Fonticula alba]) HSP 1 Score: 174.481 bits (441), Expect = 1.368e-48 Identity = 108/307 (35.18%), Postives = 163/307 (53.09%), Query Frame = 0
Query: 3 LHLCL--PGVWQACQLKQHYALNAFTGPLDCVRFTLRTKGPLGLYKGLTPWLVFAFPRSAVRFSTYEFVSQRFRETVSKESQEGELQNGKLDPYLSMAAGSIAGAVEFLTVGTPMQCIQVKMAHDAYSKVPRFHGFVSAIVGIVRAEGLLKGLYAGLGPTVLKGAVNNCIRFSTFSELKYIYQKYKLNVADNRLTATFENFSTCPESDHFQAVHEAILNPLETMLLGATSGGLSAIATHPIDTVKSNMQSLSA-DKYTSSWNCFLSILRNQGLPGLYQGMAPRFVRVSLEIGLHFSLYEQIACRIDE 306
+ +CL P + QL+ N ++GP+DCVR T++ G GLY+GL+ LV + P++AVRF +E F++ + E +G++ P + AG AG E L V PM+ I+V++ HD P++ G A IV AEGL G+Y GL PT++K N IRF ++E+K + L+ D D Q VH +M+ GA +GG+S + +PID VKS MQ + A D Y +SW+C I R G+ G Y+G PR RV ++ + +LYEQIA ++++
Sbjct: 66 IEICLTYPTEYVKTQLQLG---NRYSGPMDCVRSTVQQYGVGGLYRGLSSLLVGSIPKAAVRFLGFE----EFKKLLMDE-------DGRMTPGRNFMAGLGAGVTEALLVVCPMETIKVRLIHDQTQPNPQYRGLAHATRSIVAAEGL-AGIYRGLAPTIVKQGSNQAIRFLVYNEMKKL-----LSTGD---------------PDAVQPVHV-------SMISGAVAGGMSVLGNNPIDAVKSRMQGIGAKDLYKNSWDCAKHIYREAGVRGFYKGCTPRMARVVGDVAIVMTLYEQIAAQLEK 330
BLAST of EWM23146.1 vs. NCBI_GenBank
Match: gi|847028261|gb|AKN21573.1| (slc25a-5 [Schmidtea mediterranea]) HSP 1 Score: 170.629 bits (431), Expect = 2.512e-47 Identity = 98/291 (33.68%), Postives = 151/291 (51.89%), Query Frame = 0
Query: 10 VWQACQLKQHYAL-NAFTGPLDCVRFTLRTKGPLGLYKGLTPWLVFAFPRSAVRFSTYEFVSQRFRETVSKESQEGELQNGKLDPYLSMAAGSIAGAVEFLTVGTPMQCIQVKMAHDAYSKVPRFHGFVSAIVGIVRAEGLLKGLYAGLGPTVLKGAVNNCIRFSTFSELKYIYQKYKLNVADNRLTATFENFSTCPESDHFQAVHEAILNPLETMLLGATSGGLSAIATHPIDTVKSNMQSLSADKYTSSWNCFLSILRNQGLPGLYQGMAPRFVRVSLEIGLHFSLYEQ 299
V QL Q + + GP+DCV+ T++ G LGLY+GL+ + + P+SAVRF +E +R S +G L N + + G AG E + TPM+ I+VK +D S P+++GF+ + IV++EG+ KGLY G+ T++K N IRF LK Y+KY+ + + N A + L T + GAT+G S PID VK+ MQ L + +Y ++++CFL I +N+G Y+G PR RV L++G+ F +Y+
Sbjct: 47 VKTQLQLDQRVGMAKRYKGPIDCVKVTVKEHGVLGLYRGLSVLVYGSIPKSAVRFGAFEEFKKR------NLSADGTLTNSR-----KLLCGLGAGVSEAILAVTPMETIKVKFINDQISGNPKYNGFIHGVKTIVKSEGI-KGLYQGVTATIMKQGTNQAIRFFVMESLKDGYRKYRGDTSPN-----------------------APIPTLLTGVFGATAGAASVFGNTPIDVVKTRMQGLDSKQYKNTFDCFLKIFKNEGPRAFYKGTVPRLSRVCLDVGITFMIYDN 302
BLAST of EWM23146.1 vs. NCBI_GenBank
Match: gi|929773124|ref|XP_014161495.1| (hypothetical protein SARC_00294 [Sphaeroforma arctica JP610] >gi|906959599|gb|KNC87593.1| hypothetical protein SARC_00294 [Sphaeroforma arctica JP610]) HSP 1 Score: 169.474 bits (428), Expect = 4.838e-47 Identity = 100/291 (34.36%), Postives = 151/291 (51.89%), Query Frame = 0
Query: 15 QLKQHYALNAFTGPLDCVRFTLRTKGPLGLYKGLTPWLVFAFPRSAVRFSTYEFVSQRFRETVSKESQEGELQNGKLDPYLSMAAGSIAGAVEFLTVGTPMQCIQVKMAHDAYSKVPRFHGFVSAIVGIVRAEGLLKGLYAGLGPTVLKGAVNNCIRFSTFSELKYIYQKYKLNVADNRLTATFENFSTCPESDHFQAVHEAILNPLETMLLGATSGGLSAIATHPIDTVKSNMQSLSADKYTSSWNCFLSILRNQGLPGLYQGMAPRFVRVSLEIGLHFSLYEQIACRID 305
QL Q A + G +DC R T++ KG GLYKG+TP LV P+ A RF+ YE + + ++ E NGKL + AG +AGA E + TPM+ ++VK D PR+ G + + IV+ EGL G+Y G+GPT++K A N IRF ++ ++ L A E ++ P H + TM G +G S PID VK+ MQ L + +Y +S++CF I++ +G LY+G PR RV+L+ + F+LY+ I+ ++D
Sbjct: 41 QLDQRSATPKYKGAIDCARQTIKNKGFSGLYKGITPLLVGTIPKVASRFTAYE----QGKALLADE-------NGKLTVGRTFCAGLMAGATEAVLAVTPMETVKVKFIADQSLPNPRYKGLIHGVSTIVKEEGL-SGIYKGVGPTIVKQASNQAIRFVVYNRVR------------ETLCAKLELDASVP--------HVGV-----TMAAGVVAGTASVYGNTPIDVVKTRMQGLESKQYKNSFDCFKQIVQKEGWSALYKGATPRLSRVALDTAIVFTLYDLISAQLD 294
BLAST of EWM23146.1 vs. NCBI_GenBank
Match: gi|291228478|ref|XP_002734204.1| (PREDICTED: tricarboxylate transport protein, mitochondrial-like [Saccoglossus kowalevskii]) HSP 1 Score: 169.474 bits (428), Expect = 8.423e-47 Identity = 97/293 (33.11%), Postives = 142/293 (48.46%), Query Frame = 0
Query: 15 QLKQHYALNAFTGPLDCVRFTLRTKGPLGLYKGLTPWLVFAFPRSAVRFSTYEFVSQRFRETVSKESQEGELQNGKLDPYLSMAAGSIAGAVEFLTVGTPMQCIQVKMAHDAYSKVPRFHGFVSAIVGIVRAEGLLKGLYAGLGPTVLKGAVNNCIRFSTFSELKYIYQ-KYKLNVADNRLTATFENFSTCPESDHFQAVHEAILNPLETMLLGATSGGLSAIATHPIDTVKSNMQSLSADKYTSSWNCFLSILRNQGLPGLYQGMAPRFVRVSLEIGLHFSLYEQIACRIDE 306
QL + A + GP+DC+++T R G G Y+GL+ + + P++AVRF EF ++R+ NGK+ SM G AG E + TPM+ I+VK HD S P+F GF IVR EG G+Y G T++K N IRF ++ Y+ KY ++ + LNP T +G +G S PID VK+ MQ L A KY S+W+C + I +++G Y+G PR RV L++ L F LY+Q+ I++
Sbjct: 64 QLDERSAKPKYKGPVDCIKYTWRNYGYFGFYRGLSVLIYGSVPKAAVRFGANEFFKNQWRQR----------NNGKISKLGSMFCGLGAGISEAILAVTPMETIKVKFIHDQTSTNPKFKGFFHGCRMIVRNEGF-GGIYQGATATIIKQGSNQAIRFLVMDSMRSWYRIKYSID-------------------------EKKALNPFVTAAMGGFAGACSVFGNTPIDVVKTRMQGLDAHKYKSTWDCIVKIAKHEGGKAFYKGTVPRLTRVCLDVALVFVLYDQVLTLINK 320
BLAST of EWM23146.1 vs. NCBI_GenBank
Match: gi|828212968|ref|XP_002160020.3| (PREDICTED: tricarboxylate transport protein, mitochondrial-like [Hydra vulgaris]) HSP 1 Score: 169.088 bits (427), Expect = 8.441e-47 Identity = 98/292 (33.56%), Postives = 144/292 (49.32%), Query Frame = 0
Query: 15 QLKQHYALNAFTGPLDCVRFTLRTKGPLGLYKGLTPWLVFAFPRSAVRFSTYEFVSQRFRETVSKESQEGELQNGKLDPYLSMAAGSIAGAVEFLTVGTPMQCIQVKMAHDAYSKVPRFHGFVSAIVGIVRAEGLLKGLYAGLGPTVLKGAVNNCIRFSTFSELKYIYQKYKLNVADNRLTATFENFSTCPESDHFQAVHEAILNPLETMLLGATSGGLSAIATHPIDTVKSNMQSLSADKYTSSWNCFLSILRNQGLPGLYQGMAPRFVRVSLEIGLHFSLYEQIACRIDE 306
QL A+ +TG L+C+ T++ G GLY+GL+ L + P+S+VRFSTYEF+ R ++ +GKL ++ G AG E + V PM+ I+VK HD P++ GF S + I++ EGL G Y GL TVLK N IRF F+ LK +Q D+ H + P++T +G +G S PID +K+ MQ L A KY ++ +C L R +G Y+G PR RV ++ F+LYEQ+ +D+
Sbjct: 56 QLDSRAAVPKYTGILNCISTTIKNHGFFGLYRGLSSLLYGSIPKSSVRFSTYEFLRNRMADS-----------HGKLTHSATLMCGLGAGVAEAVLVVCPMETIKVKFIHDQTQPNPKYKGFFSGVYTIIKTEGL-HGTYRGLTATVLKQGSNQAIRFFVFNNLKSYFQ------GDD---------------------HTKEIGPVKTFFIGGIAGAASVFGNTPIDVIKTRMQGLDAHKYKNTLDCLLKTWREEGPFAFYKGAIPRLGRVCFDVAFTFTLYEQVMKGLDK 308
BLAST of EWM23146.1 vs. NCBI_GenBank
Match: gi|657814237|ref|XP_008334351.1| (PREDICTED: tricarboxylate transport protein, mitochondrial-like [Cynoglossus semilaevis]) HSP 1 Score: 169.088 bits (427), Expect = 1.111e-46 Identity = 100/286 (34.97%), Postives = 146/286 (51.05%), Query Frame = 0
Query: 15 QLKQHYALNAFTGPLDCVRFTLRTKGPLGLYKGLTPWLVFAFPRSAVRFSTYEFVSQRFRETVSKESQEGELQNGKLDPYLSMAAGSIAGAVEFLTVGTPMQCIQVKMAHDAYSKVPRFHGFVSAIVGIVRAEGLLKGLYAGLGPTVLKGAVNNCIRFSTFSELKYIYQKYKLNVADNRLTATFENFSTCPESDHFQAVHEAILNPLETMLLGATSGGLSAIATHPIDTVKSNMQSLSADKYTSSWNCFLSILRNQGLPGLYQGMAPRFVRVSLEIGLHFSLYEQI 300
QL + + G DCV+ T+++ G GLY+GL+ L + P+SAVRF +EF+S ++ ++G+LD M G AG +E + V PM+ ++VK HD S P++ GF + IVR +G L+G Y GL TVLK N IRF + LK Y+ DH +A+ NPL T L GA +G S P+D +K+ MQ L A KY S+ +C + ILR +GL Y+G PR RV L++ + F +YE++
Sbjct: 60 QLDEKANPPKYRGIGDCVKQTVQSHGVRGLYRGLSSLLYGSIPKSAVRFGVFEFLSNHAKD-----------ESGRLDGTRGMLCGLGAGVLEAVLVVCPMETVKVKFIHDQTSASPKYRGFFHGVGEIVRQQG-LRGTYQGLTATVLKQGSNQAIRFYVMTSLKNWYKG----------------------DDHNRAI-----NPLVTGLFGAIAGAASVFGNTPLDVIKTRMQGLEAHKYKSTVDCAMKILRYEGLAAFYKGTVPRLGRVCLDVAIVFIIYEEV 306
BLAST of EWM23146.1 vs. NCBI_GenBank
Match: gi|348527136|ref|XP_003451075.1| (PREDICTED: tricarboxylate transport protein, mitochondrial [Oreochromis niloticus]) HSP 1 Score: 168.318 bits (425), Expect = 1.895e-46 Identity = 101/286 (35.31%), Postives = 147/286 (51.40%), Query Frame = 0
Query: 15 QLKQHYALNAFTGPLDCVRFTLRTKGPLGLYKGLTPWLVFAFPRSAVRFSTYEFVSQRFRETVSKESQEGELQNGKLDPYLSMAAGSIAGAVEFLTVGTPMQCIQVKMAHDAYSKVPRFHGFVSAIVGIVRAEGLLKGLYAGLGPTVLKGAVNNCIRFSTFSELKYIYQKYKLNVADNRLTATFENFSTCPESDHFQAVHEAILNPLETMLLGATSGGLSAIATHPIDTVKSNMQSLSADKYTSSWNCFLSILRNQGLPGLYQGMAPRFVRVSLEIGLHFSLYEQI 300
QL + + G DCV+ T+++ G GLY+GL+ L + P+SAVRF +EF+S ++ ++G+LD S+ G AG +E + V PM+ ++VK HD S P++ GF + IVRA+GL +G Y GL TVLK N IRF + LK Y+ DN A +NPL T L GA +G S P+D +K+ MQ L A KY S+ +C + ILR +GL Y+G PR RV L++ + F +YE++
Sbjct: 60 QLDEKANPPKYRGIGDCVKQTVQSHGIKGLYRGLSSLLYGSIPKSAVRFGVFEFLSNHAKD-----------ESGRLDSTKSLLCGLGAGVMEAVLVVCPMETVKVKFIHDQTSANPKYKGFFHGVREIVRAQGL-RGTYQGLTATVLKQGSNQAIRFFVMTSLKNWYK------GDNPNKA---------------------INPLVTGLFGAIAGAASVFGNTPLDVIKTRMQGLEAHKYKSTLDCAMKILRYEGLAAFYKGTVPRLGRVCLDVAIVFIIYEEV 306 The following BLAST results are available for this feature:
BLAST of EWM23146.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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