EWM23171.1, cds7505 (CDS) Nannochloropsis gaditana

Overview
NameEWM23171.1
Unique Namecds7505
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:158791..159023 +
Alignment locationCM002472.1:159184..159276 +
Alignment locationCM002472.1:159395..159545 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23171.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100043g9.7254.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:158791..159023 +
CM002472.1supercontigCM002472.1:159184..159276 +
CM002472.1supercontigCM002472.1:159395..159545 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23171.1 vs. NCBI_GenBank
Match: gi|585104052|gb|EWM23171.1| (hypothetical protein Naga_100043g9 [Nannochloropsis gaditana])

HSP 1 Score: 318.161 bits (814), Expect = 5.883e-110
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0 
Query:    1 MLLPCSSTKCGLSWSSSETNPSGSSTSVTLRPRSIPPSALPSPSSSSSFCPVSSSTSVDPSLSSGQQFLDAPATSSCCDGVCRVRSHEFVGCCQGRDLKRSTFYHKVSPRVVDGRAHAVDERKQHMEVPRKRVEELSEEEDAKHFHEYELKNAVLPGG 158
            MLLPCSSTKCGLSWSSSETNPSGSSTSVTLRPRSIPPSALPSPSSSSSFCPVSSSTSVDPSLSSGQQFLDAPATSSCCDGVCRVRSHEFVGCCQGRDLKRSTFYHKVSPRVVDGRAHAVDERKQHMEVPRKRVEELSEEEDAKHFHEYELKNAVLPGG
Sbjct:    1 MLLPCSSTKCGLSWSSSETNPSGSSTSVTLRPRSIPPSALPSPSSSSSFCPVSSSTSVDPSLSSGQQFLDAPATSSCCDGVCRVRSHEFVGCCQGRDLKRSTFYHKVSPRVVDGRAHAVDERKQHMEVPRKRVEELSEEEDAKHFHEYELKNAVLPGG 158
The following BLAST results are available for this feature:
BLAST of EWM23171.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104052|gb|EWM23171.1|5.883e-110100.00hypothetical protein Naga_100043g9 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7523rna7523Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications