EWM23176.1, cds7495 (CDS) Nannochloropsis gaditana

Overview
NameEWM23176.1
Unique Namecds7495
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:135575..135859 -
Alignment locationCM002472.1:133991..135403 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23176.1
Productapurinic endonuclease-redox protein
Orig transcript idgnl|cribi|Naga_100484g4.2346.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:135575..135859 -
CM002472.1supercontigCM002472.1:133991..135403 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0004519endonuclease activity
GO:0003677DNA binding
GO:0004518nuclease activity
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: INTERPRO
TermDefinition
IPR020847AP_endonuclease_F1_BS
IPR020848AP_endonuclease_F1_CS
IPR005135Endo/exonuclease/phosphatase
IPR004808AP_endonuc_1
Homology
BLAST of EWM23176.1 vs. NCBI_GenBank
Match: gi|585104058|gb|EWM23176.1| (apurinic endonuclease-redox protein [Nannochloropsis gaditana])

HSP 1 Score: 1142.87 bits (2955), Expect = 0.000e+0
Identity = 565/565 (100.00%), Postives = 565/565 (100.00%), Query Frame = 0
Query:    1 MLLALLTLPVQLAFMLNSPTIIHVFGLNTCVNLVSGLCFLPGPLSRGCSSKALMTSRHSSSRFRESFGEFSSTVRTQKWKSSRSISTRTSTSVFSSSGASLHMSPSEPEGARDPLKKRGRPAKGPKPSAQDAAMVAGAESSARRVPLHGDQTRKEVASVGRGREPRSRKAAASPEAMNGTDPSSSTLSPPKKARKGRSRKGDDAVSQGTAVSTERLKDAAAPTSAGSSAVPKSKRPPLQRATIPRGLTPRLEDGPPVSSSSSSSSSRPRRRLRLLSWNVAGLRGLLKKGETAAEAFRSLLLRERPDVLCLQETKLQEEHVAEVAAALRELHLPTFEGNWHCSTAKKGYSGTSVLVSESAGLAVGPGGVTCGMEGEGDGEGEGRVISVDLGAFTLVNVYTPNSGEGLRRLAFRTQAWDRAFERHLEALQGAGDGNRAVLCCGDLNVAHLDADFYNPGEARMAKAAGTTPEERASFGRLLEGAGMVDSFRHYHPDVTGCYSYWSMRAGNRPYNRGMRLDYFLASKNMLRGGDEGGGVPRLLDSFILDQDPAVSKLSDHAPVGVLLEV 565
            MLLALLTLPVQLAFMLNSPTIIHVFGLNTCVNLVSGLCFLPGPLSRGCSSKALMTSRHSSSRFRESFGEFSSTVRTQKWKSSRSISTRTSTSVFSSSGASLHMSPSEPEGARDPLKKRGRPAKGPKPSAQDAAMVAGAESSARRVPLHGDQTRKEVASVGRGREPRSRKAAASPEAMNGTDPSSSTLSPPKKARKGRSRKGDDAVSQGTAVSTERLKDAAAPTSAGSSAVPKSKRPPLQRATIPRGLTPRLEDGPPVSSSSSSSSSRPRRRLRLLSWNVAGLRGLLKKGETAAEAFRSLLLRERPDVLCLQETKLQEEHVAEVAAALRELHLPTFEGNWHCSTAKKGYSGTSVLVSESAGLAVGPGGVTCGMEGEGDGEGEGRVISVDLGAFTLVNVYTPNSGEGLRRLAFRTQAWDRAFERHLEALQGAGDGNRAVLCCGDLNVAHLDADFYNPGEARMAKAAGTTPEERASFGRLLEGAGMVDSFRHYHPDVTGCYSYWSMRAGNRPYNRGMRLDYFLASKNMLRGGDEGGGVPRLLDSFILDQDPAVSKLSDHAPVGVLLEV
Sbjct:    1 MLLALLTLPVQLAFMLNSPTIIHVFGLNTCVNLVSGLCFLPGPLSRGCSSKALMTSRHSSSRFRESFGEFSSTVRTQKWKSSRSISTRTSTSVFSSSGASLHMSPSEPEGARDPLKKRGRPAKGPKPSAQDAAMVAGAESSARRVPLHGDQTRKEVASVGRGREPRSRKAAASPEAMNGTDPSSSTLSPPKKARKGRSRKGDDAVSQGTAVSTERLKDAAAPTSAGSSAVPKSKRPPLQRATIPRGLTPRLEDGPPVSSSSSSSSSRPRRRLRLLSWNVAGLRGLLKKGETAAEAFRSLLLRERPDVLCLQETKLQEEHVAEVAAALRELHLPTFEGNWHCSTAKKGYSGTSVLVSESAGLAVGPGGVTCGMEGEGDGEGEGRVISVDLGAFTLVNVYTPNSGEGLRRLAFRTQAWDRAFERHLEALQGAGDGNRAVLCCGDLNVAHLDADFYNPGEARMAKAAGTTPEERASFGRLLEGAGMVDSFRHYHPDVTGCYSYWSMRAGNRPYNRGMRLDYFLASKNMLRGGDEGGGVPRLLDSFILDQDPAVSKLSDHAPVGVLLEV 565          
BLAST of EWM23176.1 vs. NCBI_GenBank
Match: gi|553184413|ref|XP_005854085.1| (hypothetical protein NGA_0452200, partial [Nannochloropsis gaditana CCMP526] >gi|422294980|gb|EKU22279.1| hypothetical protein NGA_0452200, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 321.627 bits (823), Expect = 2.493e-104
Identity = 169/173 (97.69%), Postives = 169/173 (97.69%), Query Frame = 0
Query:   94 FSSSGASLHMSPSEPEGARDPLKKRGRPAKGPKPSAQDAAMVAGAESSARRVPLHGDQTRKEVASVGRGREPRSRKAAASPEAMNGTDPSSSTLSPPKKARKGRSRKGDDAVSQGTAVSTERLKDAAAPTSAGSSAVPKSKRPPLQRATIPRGLTPRLEDGPPVSSSSSSSSS 266
             SS  ASLHMSPSEPEGARDPLKKRGRPAKGPKPSAQDAAMVAGAESSARRVPLHGDQTRKEVASVGRGREPRSRKAAASPEAMNGTDPSSSTLSPPKKARKGRSRKGDDAVSQGTAVSTERLKDAAAPTSAGSSAVPKSKRPPLQRATIPRGLTPRLEDGPPVS SSSSSSS
Sbjct:   33 LSSGAASLHMSPSEPEGARDPLKKRGRPAKGPKPSAQDAAMVAGAESSARRVPLHGDQTRKEVASVGRGREPRSRKAAASPEAMNGTDPSSSTLSPPKKARKGRSRKGDDAVSQGTAVSTERLKDAAAPTSAGSSAVPKSKRPPLQRATIPRGLTPRLEDGPPVSFSSSSSSS 205          

HSP 2 Score: 80.1073 bits (196), Expect = 1.345e-13
Identity = 36/40 (90.00%), Postives = 36/40 (90.00%), Query Frame = 0
Query:    1 MLLALLTLPVQLAFMLNSPTIIHVFGLNTCVNLVSGLCFL 40
            MLLALLTLPVQLAFMLNSPTIIHVFGLNTCVNL SG   L
Sbjct:    1 MLLALLTLPVQLAFMLNSPTIIHVFGLNTCVNLSSGAASL 40          
BLAST of EWM23176.1 vs. NCBI_GenBank
Match: gi|255075203|ref|XP_002501276.1| (predicted protein [Micromonas commoda] >gi|226516540|gb|ACO62534.1| predicted protein [Micromonas commoda])

HSP 1 Score: 250.366 bits (638), Expect = 1.242e-74
Identity = 145/323 (44.89%), Postives = 191/323 (59.13%), Query Frame = 0
Query:  242 TIPRGLTPRLEDGPPVSSSSSSSSSRPRRRLRLLSWNVAGLRGLLKKGETAAEAFRSLLLRERPDVLCLQETKLQEEHVAEVAAALRELHLPTFEG-NWHCSTAKKGYSGTSVLVSESAGLAVGPGGVTCGMEGEGDGEGEGRVISVDLGAFTLVNVYTPNSGEGLRRLAFRTQAWDRAFERHLEALQGAGDGNRAVLCCGDLNVAHLDADFYNPGEARMAKAAGTTPEERASFGRLLEGAGMVDSFRHYHPDVTGCYSYWSMRAGNRPYNRGMRLDYFLASKNMLRGGDEGGGVPRLLDSFILDQDPAVSKLSDHAPVGVLL 563
             IP+   PR E  PP S+   +      +R + +SWNVAGLR LL K    +   R +   E PDV+C+QE KLQ+ HV +    L E+ LP +    +  STAKKGYSG   +V        G G   CG   EG      RV++++  AFT+V  Y PNSG+ L RL +R + WD  F  +L  L G   G + V+  GDLNV HLD D YN       K  G TPEER+S+ R LE   +VD+FR +HP+  G YSYWS RAGN+P NRG+RLDYF AS+ ++  G +GGGV R++DSF+LD+   V++ SDHAPVG+ L
Sbjct:   57 VIPQSDAPRAE--PPGSTPPGA------KRFKAISWNVAGLRALLDKN---SHTLRRIADVESPDVICVQEHKLQDVHVNDAVRRLGEI-LPEYRTVKFAVSTAKKGYSGLLSVVE-------GMGDFRCGYTDEG------RVLTLEFDAFTMVFTYVPNSGQKLERLEYRLKKWDVDFRAYLAHLDGETRG-KPVIVGGDLNVGHLDEDIYNVDAPHTKKQCGLTPEERSSWTRTLESVKLVDTFRAFHPNARGWYSYWSGRAGNKPRNRGLRLDYFAASERIMSSGRDGGGV-RVVDSFVLDK--LVAEASDHAPVGITL 350          
BLAST of EWM23176.1 vs. NCBI_GenBank
Match: gi|693500749|emb|CEF97122.1| (Exodeoxyribonuclease III xth [Ostreococcus tauri])

HSP 1 Score: 245.358 bits (625), Expect = 1.088e-72
Identity = 141/357 (39.50%), Postives = 201/357 (56.30%), Query Frame = 0
Query:  232 KSKRPP--LQRATIPRGLTPRLEDGPPVSSSSSSSSSRPRRRLRLLSWNVAGLRGLLKKGETAAEAFRSLLLRERPDVLCLQETKLQEEHVAEVAAALRELHLPTFEGN-WHCSTAKKGYSGT-----------SVLVSESAGLAVGPGGVTCGMEGEGDGEG---------EGRVISVDLGAFTLVNVYTPNSGEGLRRLAFRTQAWDRAFERHLEALQGAGDGNRAVLCCGDLNVAHLDADFYNPGEARMAKAAGTTPEERASFGRLLEGAGMVDSFRHYHPDVTGCYSYWSMRAGNRPYNRGMRLDYFLASKNMLRGGDEGGGVPRLLDSFILDQDPAVSKLSDHAPVGVLLEV 565
            K+K P    ++  I R + P            + ++   R   + +SWNVAGLR  ++K   +    R+L+  ERPDV+ LQE KLQ  H+    + L+EL  P ++   +  STAKKGYSG             V +    G A  P  V+ G +     EG         EGR ++++   F +V+ Y PNSG+ L+RL +R + W+R  + HL+AL    D  + V+  GDLNVAHLDAD +N   + + K+AGTTP+ER +FG +LE  G+ DSFR +H D  G +SYWS+RAGNRP+N+G+RLDY +ASK +  G D G     ++D+FILDQ       SDHAPVG+ L +
Sbjct:   20 KTKEPAKRFEQTEIARNVAP-----------GAKTTRDGRETFKAISWNVAGLRSFVEK---SGAKLRALVEEERPDVIILQEHKLQMSHIDAFGSKLKEL-CPGYDTTRFAVSTAKKGYSGIVAVSREGRKGGQVTIEAMLGGASKPA-VSDGFKAVSHSEGLQGGTAYVDEGRTLTIEYEKFYVVSAYVPNSGQDLKRLDYRIKEWERDMKAHLKAL----DAKKPVIYIGDLNVAHLDADIWNVTASHIKKSAGTTPQERGAFGVMLEENGLHDSFRFFHGDAAGWFSYWSVRAGNRPFNKGLRLDYAVASKRLFDGDDSG---VEVVDAFILDQVTG----SDHAPVGITLAI 349          
BLAST of EWM23176.1 vs. NCBI_GenBank
Match: gi|523540403|ref|XP_003078172.2| (ARP protein (ISS), partial [Ostreococcus tauri])

HSP 1 Score: 246.514 bits (628), Expect = 1.119e-71
Identity = 136/318 (42.77%), Postives = 188/318 (59.12%), Query Frame = 0
Query:  269 RRRLRLLSWNVAGLRGLLKKGETAAEAFRSLLLRERPDVLCLQETKLQEEHVAEVAAALRELHLPTFEGN-WHCSTAKKGYSGT-----------SVLVSESAGLAVGPGGVTCGMEGEGDGEG---------EGRVISVDLGAFTLVNVYTPNSGEGLRRLAFRTQAWDRAFERHLEALQGAGDGNRAVLCCGDLNVAHLDADFYNPGEARMAKAAGTTPEERASFGRLLEGAGMVDSFRHYHPDVTGCYSYWSMRAGNRPYNRGMRLDYFLASKNMLRGGDEGGGVPRLLDSFILDQDPAVSKLSDHAPVGVLLEV 565
            R   + +SWNVAGLR  ++K   +    R+L+  ERPDV+ LQE KLQ  H+    + L+EL  P ++   +  STAKKGYSG             V +    G A  P  V+ G +     EG         EGR ++++   F +V+ Y PNSG+ L+RL +R + W+R  + HL+AL    D  + V+  GDLNVAHLDAD +N   + + K+AGTTP+ER +FG +LE  G+ DSFR +H D  G +SYWS+RAGNRP+N+G+RLDY +ASK +  G D G  V   +D+FILDQ       SDHAPVG+ L +
Sbjct:  163 RETFKAISWNVAGLRSFVEK---SGAKLRALVEEERPDVIILQEHKLQMSHIDAFGSKLKEL-CPGYDTTRFAVSTAKKGYSGIVAVSREGRKGGQVTIEAMLGGASKPA-VSDGFKAVSHSEGLQGGTAYVDEGRTLTIEYEKFYVVSAYVPNSGQDLKRLDYRIKEWERDMKAHLKAL----DAKKPVIYIGDLNVAHLDADIWNVTASHIKKSAGTTPQERGAFGVMLEENGLHDSFRFFHGDAAGWFSYWSVRAGNRPFNKGLRLDYAVASKRLFDGDDSGVEV---VDAFILDQVTG----SDHAPVGITLAI 464          
BLAST of EWM23176.1 vs. NCBI_GenBank
Match: gi|1199288728|gb|OUS43864.1| (ARP protein, partial [Ostreococcus tauri])

HSP 1 Score: 245.743 bits (626), Expect = 1.690e-71
Identity = 136/318 (42.77%), Postives = 188/318 (59.12%), Query Frame = 0
Query:  269 RRRLRLLSWNVAGLRGLLKKGETAAEAFRSLLLRERPDVLCLQETKLQEEHVAEVAAALRELHLPTFEGN-WHCSTAKKGYSGT-----------SVLVSESAGLAVGPGGVTCGMEGEGDGEG---------EGRVISVDLGAFTLVNVYTPNSGEGLRRLAFRTQAWDRAFERHLEALQGAGDGNRAVLCCGDLNVAHLDADFYNPGEARMAKAAGTTPEERASFGRLLEGAGMVDSFRHYHPDVTGCYSYWSMRAGNRPYNRGMRLDYFLASKNMLRGGDEGGGVPRLLDSFILDQDPAVSKLSDHAPVGVLLEV 565
            R   + +SWNVAGLR  ++K   +    R+L+  ERPDV+ LQE KLQ  H+    + L+EL  P ++   +  STAKKGYSG             V +    G A  P  V+ G +     EG         EGR ++++   F +V+ Y PNSG+ L+RL +R + W+R  + HL+AL    D  + V+  GDLNVAHLDAD +N   + + K+AGTTP+ER +FG +LE  G+ DSFR +H D  G +SYWS+RAGNRP+N+G+RLDY +ASK +  G D G  V   +D+FILDQ       SDHAPVG+ L +
Sbjct:  157 REIFKAISWNVAGLRSFVEK---SGAKLRALVEEERPDVIILQEHKLQMSHIDAFGSKLKEL-CPGYDTTRFAVSTAKKGYSGIVAVSREGRKGGQVTIEAMLGGASKPA-VSDGFKAVSHSEGLQGGTAYVDEGRTLTIEYEKFYVVSAYVPNSGQDLKRLDYRIKEWERDMKAHLKAL----DAKKPVIYIGDLNVAHLDADIWNVTASHIKKSAGTTPQERGAFGVMLEENGLHDSFRFFHGDAAGWFSYWSVRAGNRPFNKGLRLDYAVASKRLFDGDDSGVEV---VDAFILDQVTG----SDHAPVGITLAI 458          
BLAST of EWM23176.1 vs. NCBI_GenBank
Match: gi|551675602|ref|XP_005840555.1| (apurinic/apyrimidinic endonuclease family member in base excision repair [Guillardia theta CCMP2712] >gi|428184721|gb|EKX53575.1| apurinic/apyrimidinic endonuclease family member in base excision repair [Guillardia theta CCMP2712])

HSP 1 Score: 243.817 bits (621), Expect = 6.546e-71
Identity = 152/428 (35.51%), Postives = 219/428 (51.17%), Query Frame = 0
Query:  190 PKKARKGRSRK---GDDAVSQGTAVSTERLKDA----------AAPTSAGSSAVPKSKRPPLQRATIPRGLTPRLEDGPPVSSSSSSSSSRPRRRLRLLSWNVAGLRGLLKKGETAAEAFRSLLLRERPDVLCLQETKLQEEHVAEVAAALRELHLP---TFEGNWHCSTAKKGYSGTSVLVSESAGLAVG---------------------------PGGVTCGME--GEGDGE------GEGRVISVDLGAFTLVNVYTPNSGEGLRRLAFRTQAWDRAFERHLEALQGAGDGNRAVLCCGDLNVAHLDADFYNPGEARMAKAAGTTPEERASFGRLLEGAGMVDSFRHYH-PDVTGCYSYWSMRAGNRPYNRGMRLDYFLASKNMLRGGDEGGGVPRLLDSFILDQDPAVSKLSDHAPVGVLLEV 565
            P+K  +GR+ K   G D ++     + +  K A             T    S  PK K    Q       +   +++   +  S    +  P +R +++SWNV  +R L+KK     E  + L+ +E+PD++C QETKL++E   E    L+    P    +E ++  S + K Y+GT VLV  S   A                             P  VT G+    + DGE       EGR I+V+  +F +V  Y PNSGE L+RL FRT+ WDR    +L+ L+ +G   + V+ CGDLNVAHLD D +N G   + K+AGTTPEER SF ++LE  G VD FRH H  D  G +SYWS+RAGNRP+NRG+RLDYF+ASK++         +PR++D+ I D+  A+    DHA + + L V
Sbjct:   39 PQKRGRGRAAKEKVGKDQIADNKGDTQDEKKQAEPEKVTKKRGKKETDTAESDKPKKKAKDEQETNKKEKV---VQEKVAIEKSDIKHAELPSKRYKIVSWNVTTIRSLMKKN---PELLKKLMEQEQPDLICFQETKLKQEEHDEYEEMLKS-QFPGDQGYEAHFSSSLSNKSYAGTLVLVRSSKDKATAQKQTKMDSFFKGKDSKSAKKDEETACPPLKVTFGLSTLSKDDGEIAAEVIQEGRTITVEFESFFVVATYVPNSGEKLQRLEFRTKLWDRKVVEYLKKLEASG---KPVIWCGDLNVAHLDNDIWNVGAKHLVKSAGTTPEERDSFSKILE-EGYVDCFRHLHGEDAKGWFSYWSVRAGNRPWNRGLRLDYFVASKSLCS----QDSLPRVVDADIHDEFVAI----DHAAISLTLAV 447          
BLAST of EWM23176.1 vs. NCBI_GenBank
Match: gi|553184409|ref|XP_005854084.1| (hypothetical protein NGA_0452000 [Nannochloropsis gaditana CCMP526] >gi|422294979|gb|EKU22278.1| hypothetical protein NGA_0452000 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 224.942 bits (572), Expect = 3.000e-68
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
Query:  460 MAKAAGTTPEERASFGRLLEGAGMVDSFRHYHPDVTGCYSYWSMRAGNRPYNRGMRLDYFLASKNMLRGGDEGGGVPRLLDSFILDQDPAVSKLSDHAPVGVLLEV 565
            MAKAAGTTPEERASFGRLLEGAGMVDSFRHYHPDVTGCYSYWSMRAGNRPYNRGMRLDYFLASKNMLRGGDEGGGVPRLLDSFILDQDPAVSKLSDHAPVGVLLEV
Sbjct:    1 MAKAAGTTPEERASFGRLLEGAGMVDSFRHYHPDVTGCYSYWSMRAGNRPYNRGMRLDYFLASKNMLRGGDEGGGVPRLLDSFILDQDPAVSKLSDHAPVGVLLEV 106          
BLAST of EWM23176.1 vs. NCBI_GenBank
Match: gi|145344271|ref|XP_001416660.1| (predicted protein, partial [Ostreococcus lucimarinus CCE9901] >gi|144576886|gb|ABO94953.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901])

HSP 1 Score: 224.172 bits (570), Expect = 1.243e-65
Identity = 128/289 (44.29%), Postives = 173/289 (59.86%), Query Frame = 0
Query:  276 SWNVAGLRGLLKKGETAAEAFRSLLLRERPDVLCLQETKLQEEHVAEVAAALRELHLPTFEG-NWHCSTAKKGYSGTSVLVSESAGLAVGPGGVTCGMEGEGDGEGEGRVISVDLGAFTLVNVYTPNSGEGLRRLAFRTQAWDRAFERHLEALQGAGDGNRAVLCCGDLNVAHLDADFYNPGEARMAKAAGTTPEERASFGRLLEGAGMVDSFRHYHPDVTGCYSYWSMRAGNRPYNRGMRLDYFLASKNMLRGGDEGGGVPRLLDSFILDQDPAVSKLSDHAPVGVLL 563
            +WNVAGLR   +K   + +  R ++  E PDV+ LQE KLQE H A     LR    P ++   +  S AKKGYSG +        L +  G    G  G  D   EGR ++++   F LV  Y PNSG+ L+RL +R   W+R    HL+ L    D  + V+  GDLNVAHLD+D +N G + + K+AGTTP+ER +FG +LE   + D+FRH+H D  G +SYWS+RAGNRP+N+G+RLDY LASK +  GG +G     ++D+FILD+       SDHAPVGV L
Sbjct:    1 AWNVAGLRSFHEK---SLDRLRGVIAGEAPDVVILQEHKLQETHCAAFTERLRR-DFPMYKTVQFAVSVAKKGYSGVATYDGPKL-LEIREG---LGARGYTD---EGRTMTLEFEGFYLVTAYVPNSGQDLKRLDYRIGEWERDMRAHLKEL----DAKKPVVYMGDLNVAHLDSDIWNVGASHIKKSAGTTPQEREAFGVMLEENDLRDAFRHFHGDAVGWFSYWSVRAGNRPFNKGLRLDYTLASKRVFDGGADG---VEVVDAFILDKVLG----SDHAPVGVTL 267          
BLAST of EWM23176.1 vs. NCBI_GenBank
Match: gi|778685415|ref|XP_011652215.1| (PREDICTED: apurinic endonuclease-redox protein [Cucumis sativus])

HSP 1 Score: 225.328 bits (573), Expect = 1.307e-63
Identity = 151/401 (37.66%), Postives = 215/401 (53.62%), Query Frame = 0
Query:  165 PRSRKAAASPEAMNGTDPSSSTLSPPKKARKGRSRKGDDAVSQGTAVSTERLKDAAAPTSAGSSAVPKSKRPPLQRATIPRGLTPRLEDGPPVSSSSSSSSSRPRRRLRLLSWNVAGLRGLLKKGETAAEAFRSLLLRERPDVLCLQETKLQEEHVAEVAAALRELHLPTFEGNWHCSTAKKGYSGTSVLVSESAGLAVGPGGVTCGMEGEGDGEGEGRVISVDLGAFTLVNVYTPNSGEGLRRLAFRTQAWDRAFERHLEALQGAGDGNRAVLCCGDLNVAHLDADFYNPGEARMAKAAGTTPEERASFGRLLEGAGMVDSFRHYHPDVTGCYSYWSMRAGNRPYNRGMRLDYFLASKNMLRGGDEGGGVPRLLDSFILDQDPAVSKLSDHAPVGVLLEV 565
            P+ R++A S +  +G   S+    P  + RK  S    D VS     S  + +D           V   K+P  Q+  IP    PR+    P+S  + S        +++LSWNV GLR LLK G +A E    L  RE  DVLCLQETKLQE+ +  +  +L + +  T+   W CS +K GYSGT+++        + P  V  G+ G  + +GEGRV+ V+  +F L+NVY PNSG+GL+RL++R   WD +   +++ L+ +    + V+  GDLN AH + D YNP   R  K+AG T EER SF       G VD+FR  HPDV G Y+YW  R G R  N+G RLDYFL S+ +           ++ DS+IL   P V   SDH P+G++L++
Sbjct:  127 PKERQSAESNKVSSGAIGSN----PSSRKRKDSS----DVVS-----SIVKQEDGVEGMQNEPWVVLAHKKP--QKGWIP--YNPRIMRPKPLSKDTKS--------VKILSWNVNGLRALLK-GSSAVE----LAEREDFDVLCLQETKLQEKDILNITKSLVDGYHYTY---WTCSVSKLGYSGTAIISR------IKPISVRYGL-GISEHDGEGRVVMVEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKS----KPVILTGDLNCAHQEIDLYNPAGNR--KSAGFTNEERQSFETNFLQKGFVDTFRQKHPDVVG-YTYWGYRHGGRKTNKGWRLDYFLVSERV---------AEKVHDSYIL---PDVGG-SDHCPIGLVLKL 467          
The following BLAST results are available for this feature:
BLAST of EWM23176.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104058|gb|EWM23176.1|0.000e+0100.00apurinic endonuclease-redox protein [Nannochlorops... [more]
gi|553184413|ref|XP_005854085.1|2.493e-10497.69hypothetical protein NGA_0452200, partial [Nannoch... [more]
gi|255075203|ref|XP_002501276.1|1.242e-7444.89predicted protein [Micromonas commoda] >gi|2265165... [more]
gi|693500749|emb|CEF97122.1|1.088e-7239.50Exodeoxyribonuclease III xth [Ostreococcus tauri][more]
gi|523540403|ref|XP_003078172.2|1.119e-7142.77ARP protein (ISS), partial [Ostreococcus tauri][more]
gi|1199288728|gb|OUS43864.1|1.690e-7142.77ARP protein, partial [Ostreococcus tauri][more]
gi|551675602|ref|XP_005840555.1|6.546e-7135.51apurinic/apyrimidinic endonuclease family member i... [more]
gi|553184409|ref|XP_005854084.1|3.000e-68100.00hypothetical protein NGA_0452000 [Nannochloropsis ... [more]
gi|145344271|ref|XP_001416660.1|1.243e-6544.29predicted protein, partial [Ostreococcus lucimarin... [more]
gi|778685415|ref|XP_011652215.1|1.307e-6337.66PREDICTED: apurinic endonuclease-redox protein [Cu... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7513rna7513Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications