EWM23178.1, cds7493 (CDS) Nannochloropsis gaditana

Overview
NameEWM23178.1
Unique Namecds7493
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:131615..132253 +
Alignment locationCM002472.1:132598..132615 +

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Properties
Property NameValue
Protein idEWM23178.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100484g6.2348.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:131615..132253 +
CM002472.1supercontigCM002472.1:132598..132615 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23178.1 vs. NCBI_GenBank
Match: gi|585104060|gb|EWM23178.1| (hypothetical protein Naga_100484g6 [Nannochloropsis gaditana])

HSP 1 Score: 417.542 bits (1072), Expect = 2.536e-147
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0 
Query:    1 MRVDVRHVPRSSLPPSCLAREKMPPSLPPSLPTSLPSATGPRPPVQEEGKDEACSERALCEDGGREAGAEVEREGRKRRRAFEGLGTASGVGGGREGGRGRLRGGQMMSVGGPGKRGRGARWARGDRGRGRVLGEGGVERATGARVSAVQGGQAQYLGEQPQEDILRDWKQPSESSAPRSMHARGEARRNGEGSNGPGSNGPGSNGQGMWERERTSPF 218
            MRVDVRHVPRSSLPPSCLAREKMPPSLPPSLPTSLPSATGPRPPVQEEGKDEACSERALCEDGGREAGAEVEREGRKRRRAFEGLGTASGVGGGREGGRGRLRGGQMMSVGGPGKRGRGARWARGDRGRGRVLGEGGVERATGARVSAVQGGQAQYLGEQPQEDILRDWKQPSESSAPRSMHARGEARRNGEGSNGPGSNGPGSNGQGMWERERTSPF
Sbjct:    1 MRVDVRHVPRSSLPPSCLAREKMPPSLPPSLPTSLPSATGPRPPVQEEGKDEACSERALCEDGGREAGAEVEREGRKRRRAFEGLGTASGVGGGREGGRGRLRGGQMMSVGGPGKRGRGARWARGDRGRGRVLGEGGVERATGARVSAVQGGQAQYLGEQPQEDILRDWKQPSESSAPRSMHARGEARRNGEGSNGPGSNGPGSNGQGMWERERTSPF 218
The following BLAST results are available for this feature:
BLAST of EWM23178.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104060|gb|EWM23178.1|2.536e-147100.00hypothetical protein Naga_100484g6 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7511rna7511Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications