EWM23215.1, cds7459 (CDS) Nannochloropsis gaditana

Overview
NameEWM23215.1
Unique Namecds7459
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:45570..45696 +
Alignment locationCM002472.1:45749..45888 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23215.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101006g2.4583.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:45570..45696 +
CM002472.1supercontigCM002472.1:45749..45888 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23215.1 vs. NCBI_GenBank
Match: gi|585104140|gb|EWM23215.1| (hypothetical protein Naga_101006g2 [Nannochloropsis gaditana])

HSP 1 Score: 179.874 bits (455), Expect = 2.609e-57
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 
Query:    1 MCRKGRVIQGEKSASKCHRVVDRAWYARSRCARRGSRENEKNDFFSSRLHAACMYWNRSKASVSWRRTKVLVLSNASCARGPQHVRQF 88
            MCRKGRVIQGEKSASKCHRVVDRAWYARSRCARRGSRENEKNDFFSSRLHAACMYWNRSKASVSWRRTKVLVLSNASCARGPQHVRQF
Sbjct:    1 MCRKGRVIQGEKSASKCHRVVDRAWYARSRCARRGSRENEKNDFFSSRLHAACMYWNRSKASVSWRRTKVLVLSNASCARGPQHVRQF 88
The following BLAST results are available for this feature:
BLAST of EWM23215.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104140|gb|EWM23215.1|2.609e-57100.00hypothetical protein Naga_101006g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7477rna7477Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications