EWM23217.1, cds7456 (CDS) Nannochloropsis gaditana

Overview
NameEWM23217.1
Unique Namecds7456
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:40317..40372 +
Alignment locationCM002472.1:40639..40793 +
Alignment locationCM002472.1:41087..41168 +
Alignment locationCM002472.1:41321..41381 +
Alignment locationCM002472.1:41452..41492 +
Alignment locationCM002472.1:41758..41820 +
Alignment locationCM002472.1:42080..42145 +
Alignment locationCM002472.1:42308..42317 +

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Properties
Property NameValue
Protein idEWM23217.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100553g1.8985.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:40317..40372 +
CM002472.1supercontigCM002472.1:40639..40793 +
CM002472.1supercontigCM002472.1:41087..41168 +
CM002472.1supercontigCM002472.1:41321..41381 +
CM002472.1supercontigCM002472.1:41452..41492 +
CM002472.1supercontigCM002472.1:41758..41820 +
CM002472.1supercontigCM002472.1:42080..42145 +
CM002472.1supercontigCM002472.1:42308..42317 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23217.1 vs. NCBI_GenBank
Match: gi|585104146|gb|EWM23217.1| (hypothetical protein Naga_100553g1 [Nannochloropsis gaditana])

HSP 1 Score: 347.821 bits (891), Expect = 4.398e-121
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0 
Query:    1 MRVRYSSALLLALSLASTSFAVPPTEDAATSATANGAASALLGDLQNPIGDPGDVLAGIIHENWDSIFKKDSGGVKGLLHRKRQLLSDLGLEAADADSLEVETGAGTEGDLEGGDEEQVLAYSPKLPGRGQSLIPSLRKRNPLLPSSEGSQPVRLRTAWRVQRPLGAPKAPVLGRPT 177
            MRVRYSSALLLALSLASTSFAVPPTEDAATSATANGAASALLGDLQNPIGDPGDVLAGIIHENWDSIFKKDSGGVKGLLHRKRQLLSDLGLEAADADSLEVETGAGTEGDLEGGDEEQVLAYSPKLPGRGQSLIPSLRKRNPLLPSSEGSQPVRLRTAWRVQRPLGAPKAPVLGRPT
Sbjct:    1 MRVRYSSALLLALSLASTSFAVPPTEDAATSATANGAASALLGDLQNPIGDPGDVLAGIIHENWDSIFKKDSGGVKGLLHRKRQLLSDLGLEAADADSLEVETGAGTEGDLEGGDEEQVLAYSPKLPGRGQSLIPSLRKRNPLLPSSEGSQPVRLRTAWRVQRPLGAPKAPVLGRPT 177
The following BLAST results are available for this feature:
BLAST of EWM23217.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104146|gb|EWM23217.1|4.398e-121100.00hypothetical protein Naga_100553g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7474rna7474Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications