EWM23234.1, cds7439 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23234.1 vs. NCBI_GenBank
Match: gi|585104182|gb|EWM23234.1| (beta-ig-h3 fasciclin [Nannochloropsis gaditana]) HSP 1 Score: 362.844 bits (930), Expect = 1.461e-126 Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0
Query: 1 MRVLVSLLACAATASAFLLPTPTTRPASALFASTVGAKDIVDTAVDAGSFKTLATALTAAGLVETLKGPGPFTVFAPTDEAFNKLEAATLNALLADKEKLTSILTYHVVSGRVPAADVLKLTSAKTVQGGDVAVAVSSTGVKVNNANVVATDVEASNGIIHIIDSVLIPGAVAAPAAASKEVGKSLDR 188
MRVLVSLLACAATASAFLLPTPTTRPASALFASTVGAKDIVDTAVDAGSFKTLATALTAAGLVETLKGPGPFTVFAPTDEAFNKLEAATLNALLADKEKLTSILTYHVVSGRVPAADVLKLTSAKTVQGGDVAVAVSSTGVKVNNANVVATDVEASNGIIHIIDSVLIPGAVAAPAAASKEVGKSLDR
Sbjct: 1 MRVLVSLLACAATASAFLLPTPTTRPASALFASTVGAKDIVDTAVDAGSFKTLATALTAAGLVETLKGPGPFTVFAPTDEAFNKLEAATLNALLADKEKLTSILTYHVVSGRVPAADVLKLTSAKTVQGGDVAVAVSSTGVKVNNANVVATDVEASNGIIHIIDSVLIPGAVAAPAAASKEVGKSLDR 188
BLAST of EWM23234.1 vs. NCBI_GenBank
Match: gi|917616216|ref|WP_052185282.1| (hypothetical protein [Pseudomonas pelagia]) HSP 1 Score: 188.348 bits (477), Expect = 3.552e-58 Identity = 95/134 (70.90%), Postives = 114/134 (85.07%), Query Frame = 0
Query: 37 AKDIVDTAVDAGSFKTLATALTAAGLVETLKGPGPFTVFAPTDEAFNKLEAATLNALLADKEKLTSILTYHVVSGRVPAADVLKLTSAKTVQGGDVAVAVSSTGVKVNNANVVATDVEASNGIIHIIDSVLIPG 170
A DIVDTAV AGSF+TL TA+ AAGLVETLKG GPFTVFAPTDEAF K+ A L ALLAD+EKLT +LTYHVVSG+V AADV+ +TSA+TVQGG + + +S GVKVN+ANV ATD++ SNG+IH+ID+VL+PG
Sbjct: 18 AADIVDTAVAAGSFETLVTAVQAAGLVETLKGEGPFTVFAPTDEAFAKIPQADLEALLADREKLTQVLTYHVVSGKVMAADVISMTSAETVQGGTLTID-ASDGVKVNDANVTATDIKVSNGVIHVIDTVLMPG 150
BLAST of EWM23234.1 vs. NCBI_GenBank
Match: gi|502677515|ref|WP_012913228.1| (beta-Ig-H3/fasciclin [Pirellula staleyi] >gi|283440527|gb|ADB18969.1| beta-Ig-H3/fasciclin [Pirellula staleyi DSM 6068]) HSP 1 Score: 186.808 bits (473), Expect = 2.515e-57 Identity = 94/131 (71.76%), Postives = 109/131 (83.21%), Query Frame = 0
Query: 39 DIVDTAVDAGSFKTLATALTAAGLVETLKGPGPFTVFAPTDEAFNKLEAATLNALLADKEKLTSILTYHVVSGRVPAADVLKLTSAKTVQGGDVAVAVSSTGVKVNNANVVATDVEASNGIIHIIDSVLIP 169
DIVDTAV AGSFKTL A+ AAGLVETLKG GPFTVFAPTDEAF KL A T+ ALL DKEKLT+ILTYHVV G+V AADV+KL SAKTV G +V + VS VKVN+ANVV TD+E +NG+IH+ID+V++P
Sbjct: 36 DIVDTAVGAGSFKTLVAAVKAAGLVETLKGEGPFTVFAPTDEAFAKLPAGTVEALLKDKEKLTAILTYHVVPGKVMAADVVKLKSAKTVNGKEVTITVSEGSVKVNDANVVKTDIETTNGVIHVIDTVILP 166
BLAST of EWM23234.1 vs. NCBI_GenBank
Match: gi|1027800307|ref|WP_063719059.1| (hypothetical protein [Leptolyngbya valderiana] >gi|1025907623|gb|OAB56475.1| hypothetical protein AY599_22195 [Leptolyngbya valderiana BDU 20041]) HSP 1 Score: 182.57 bits (462), Expect = 1.056e-55 Identity = 89/132 (67.42%), Postives = 113/132 (85.61%), Query Frame = 0
Query: 38 KDIVDTAVDAGSFKTLATALTAAGLVETLKGPGPFTVFAPTDEAFNKLEAATLNALLADKEKLTSILTYHVVSGRVPAADVLKLTSAKTVQGGDVAVAVSSTGVKVNNANVVATDVEASNGIIHIIDSVLIP 169
K+IV+TAV+AG+F TLATALT AGL+ETL G GPFTVFAPTDEAF K+ AA L A+LADKE LTSILTYHVV+G+V ++DV+ L+SA TVQG D+ + V+ GV+V++ANVVA D+EASNG+IH+ID+V+ P
Sbjct: 33 KNIVETAVEAGNFTTLATALTEAGLIETLSGEGPFTVFAPTDEAFAKIPAADLEAILADKELLTSILTYHVVAGKVMSSDVVNLSSATTVQGSDIDITVTEGGVQVDDANVVAVDIEASNGVIHVIDTVITP 164
BLAST of EWM23234.1 vs. NCBI_GenBank
Match: gi|1097984977|emb|SFN10012.1| (Uncaracterized surface protein containing fasciclin (FAS1) repeats [Dokdonella immobilis]) HSP 1 Score: 179.489 bits (454), Expect = 1.516e-54 Identity = 95/132 (71.97%), Postives = 106/132 (80.30%), Query Frame = 0
Query: 38 KDIVDTAVDAGSFKTLATALTAAGLVETLKGPGPFTVFAPTDEAFNKLEAATLNALLADKEKLTSILTYHVVSGRVPAADVLKLTSAKTVQGGDVAVAVSSTGVKVNNANVVATDVEASNGIIHIIDSVLIP 169
KDIVDTAV AGSFKTLATAL AAGLV+TLKGPGPFTVFAPTD AF KL A T+ LL DK KLT+ILTYHVV+G V AADV+KL SAKTV G VA+ V V V+NA V DVEASNG+IH+ID+VL+P
Sbjct: 31 KDIVDTAVAAGSFKTLATALEAAGLVDTLKGPGPFTVFAPTDAAFAKLPAGTVEGLLKDKPKLTAILTYHVVAGNVKAADVVKLDSAKTVNGQSVAIKVVDGKVMVDNATVTTADVEASNGVIHVIDTVLLP 162
BLAST of EWM23234.1 vs. NCBI_GenBank
Match: gi|938892362|ref|WP_054676964.1| (fasciclin [Photobacterium sp. JCM 19050]) HSP 1 Score: 178.718 bits (452), Expect = 3.050e-54 Identity = 96/135 (71.11%), Postives = 109/135 (80.74%), Query Frame = 0
Query: 38 KDIVDTAVDAGSFKTLATALTAAGLVETLKGPGPFTVFAPTDEAFNKLEAATLNALL--ADKEKLTSILTYHVVSGRVPAADVLKLTSAKTVQGGDVAVAVSSTGVKVNNANVVATDVEASNGIIHIIDSVLIPG 170
KDIVDTAV GSF TL TA+ AAGLV+TLKG GPFTVFAPTDEAF KL T+ LL +KE LTSILTYHVVSG+V AADV+ LTSAKTVQG V + V S VKV+NANVV TDV+ASNG+IH+ID+VL+PG
Sbjct: 29 KDIVDTAVANGSFTTLVTAVKAAGLVDTLKGDGPFTVFAPTDEAFAKLPEGTVQKLLLPENKELLTSILTYHVVSGKVMAADVVNLTSAKTVQGESVEINVDSGKVKVDNANVVLTDVKASNGVIHVIDAVLMPG 163
BLAST of EWM23234.1 vs. NCBI_GenBank
Match: gi|1210104371|dbj|BAY23501.1| (beta-Ig-H3/fasciclin [Calothrix sp. NIES-2100]) HSP 1 Score: 177.563 bits (449), Expect = 3.610e-54 Identity = 90/132 (68.18%), Postives = 108/132 (81.82%), Query Frame = 0
Query: 39 DIVDTAVDAGSFKTLATALTAAGLVETLKGPGPFTVFAPTDEAFNKLEAATLNALLADKEKLTSILTYHVVSGRVPAADVLKLTSAKTVQGGDVAVAVSSTGVKVNNANVVATDVEASNGIIHIIDSVLIPG 170
DIVDTAV+AGSF TL A+ AAGLV+TLKG GPFTVFAPTDEAF+KL A T+++LL D +LT ILTYHVVSG+V AADV+ L SA TV+G V + S+ GVK+N+ANVV DVEA NG+IH+ID+VLIPG
Sbjct: 3 DIVDTAVNAGSFNTLVAAVQAAGLVDTLKGQGPFTVFAPTDEAFSKLPAGTVDSLLQDIPQLTKILTYHVVSGKVLAADVVNLDSAPTVEGSSVQIDASNGGVKINDANVVTPDVEADNGVIHVIDTVLIPG 134
BLAST of EWM23234.1 vs. NCBI_GenBank
Match: gi|930051788|ref|WP_054155058.1| (hypothetical protein [beta proteobacterium AAP51] >gi|929662892|gb|KPF45925.1| hypothetical protein D621_17340 [beta proteobacterium AAP51]) HSP 1 Score: 176.022 bits (445), Expect = 2.746e-53 Identity = 94/135 (69.63%), Postives = 109/135 (80.74%), Query Frame = 0
Query: 35 VGAKDIVDTAVDAGSFKTLATALTAAGLVETLKGPGPFTVFAPTDEAFNKLEAATLNALLADKEKLTSILTYHVVSGRVPAADVLKLTSAKTVQGGDVAVAVSSTGVKVNNANVVATDVEASNGIIHIIDSVLIP 169
V AKDIVDTAV AGSFKTLATAL AAGLVETLKG GPFTVFAPTDEAF K+ A L+ALL DK KLT++LTYHVV G+V A DV K KTVQGG + + ++ GV VNNA VV TD+EASNG+IH+ID+V++P
Sbjct: 17 VQAKDIVDTAVAAGSFKTLATALQAAGLVETLKGKGPFTVFAPTDEAFAKIPKADLDALLKDKAKLTAVLTYHVVPGKVMAKDV-KAGMVKTVQGGSLTIG-TTGGVTVNNAKVVKTDIEASNGVIHVIDTVVMP 149
BLAST of EWM23234.1 vs. NCBI_GenBank
Match: gi|1056325985|ref|WP_067776547.1| (fasciclin [Nostoc sp. NIES-3756] >gi|953513970|dbj|BAT56657.1| Beta-Ig-H3/fasciclin (plasmid) [Nostoc sp. NIES-3756] >gi|1210122551|dbj|BAY41673.1| beta-Ig-H3/fasciclin (plasmid) [Nostoc sp. NIES-2111]) HSP 1 Score: 175.252 bits (443), Expect = 3.506e-53 Identity = 90/131 (68.70%), Postives = 106/131 (80.92%), Query Frame = 0
Query: 39 DIVDTAVDAGSFKTLATALTAAGLVETLKGPGPFTVFAPTDEAFNKLEAATLNALLADKEKLTSILTYHVVSGRVPAADVLKLTSAKTVQGGDVAVAVSSTGVKVNNANVVATDVEASNGIIHIIDSVLIP 169
DIVDTAV AGSF TL A+ AAGLV+TLKGPGPFTVFAPTDEAF+KL A T++ALL D KLT ILTYHVVSG+V AADV+ L SA TV+G +V + S+ GVK+N+A V DVEA NG+IH+ID+VLIP
Sbjct: 3 DIVDTAVGAGSFNTLVAAVQAAGLVDTLKGPGPFTVFAPTDEAFSKLPAGTVDALLKDIPKLTKILTYHVVSGKVLAADVVNLDSAPTVEGSNVRIDASNGGVKINDATVTTPDVEADNGVIHVIDTVLIP 133
BLAST of EWM23234.1 vs. NCBI_GenBank
Match: gi|1096253401|ref|WP_071191397.1| (fasciclin [Trichormus sp. NMC-1]) HSP 1 Score: 174.481 bits (441), Expect = 5.258e-53 Identity = 92/131 (70.23%), Postives = 104/131 (79.39%), Query Frame = 0
Query: 39 DIVDTAVDAGSFKTLATALTAAGLVETLKGPGPFTVFAPTDEAFNKLEAATLNALLADKEKLTSILTYHVVSGRVPAADVLKLTSAKTVQGGDVAVAVSSTGVKVNNANVVATDVEASNGIIHIIDSVLIP 169
DIVDTA +AGSF TL A+ AAGLV+TLKGPGPFTVFAPTDEAF KL T++ALL D KL ILTYHVVSG+V AADV+KL SA TVQG DV + +S GVK+NNANV DV A NG+IHIID+VLIP
Sbjct: 3 DIVDTAANAGSFNTLVAAVQAAGLVDTLKGPGPFTVFAPTDEAFAKLPPGTVDALLKDIPKLKKILTYHVVSGKVLAADVVKLKSATTVQGSDVKID-ASNGVKINNANVATPDVAADNGVIHIIDTVLIP 132 The following BLAST results are available for this feature:
BLAST of EWM23234.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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