EWM23240.1, cds7433 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23240.1 vs. NCBI_GenBank
Match: gi|585104193|gb|EWM23240.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 300.056 bits (767), Expect = 6.225e-103 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
Query: 1 MAVELKKEGVASFSLWPGVVMTERMAEIRKNDPEKWEREMSVGEGYVESPRFVGRALAALLSSPSSSPSSSSSPSSSSLMDRSGTIQIVAEVAREWGVTDVDGNQPPSIRSLQFLLPNYVLKDLFASAPYLQPFVPDIKLPLSMMGARPSE 151
MAVELKKEGVASFSLWPGVVMTERMAEIRKNDPEKWEREMSVGEGYVESPRFVGRALAALLSSPSSSPSSSSSPSSSSLMDRSGTIQIVAEVAREWGVTDVDGNQPPSIRSLQFLLPNYVLKDLFASAPYLQPFVPDIKLPLSMMGARPSE
Sbjct: 1 MAVELKKEGVASFSLWPGVVMTERMAEIRKNDPEKWEREMSVGEGYVESPRFVGRALAALLSSPSSSPSSSSSPSSSSLMDRSGTIQIVAEVAREWGVTDVDGNQPPSIRSLQFLLPNYVLKDLFASAPYLQPFVPDIKLPLSMMGARPSE 151
BLAST of EWM23240.1 vs. NCBI_GenBank
Match: gi|553193064|ref|XP_005855702.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >gi|422293354|gb|EKU20654.1| short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 230.72 bits (587), Expect = 7.170e-76 Identity = 126/151 (83.44%), Postives = 126/151 (83.44%), Query Frame = 0
Query: 1 MAVELKKEGVASFSLWPGVVMTERMAEIRKNDPEKWEREMSVGEGYVESPRFVGRALAALLSSPSSSPSSSSSPSSSSLMDRSGTIQIVAEVAREWGVTDVDGNQPPSIRSLQFLLPNYVLKDLFASAPYLQPFVPDIKLPLSMMGARPSE 151
MAVELKKEGVASFSLWPGVVMTERMAEIRKNDPEKWEREMSVGEGYVESPRFVGRALAALLSSPSSSP SSSSPSSSSLMDRSGTIQIVAE LPNYVLKDLFASAPYLQPFVPDIKLPLSMMGARPSE
Sbjct: 1 MAVELKKEGVASFSLWPGVVMTERMAEIRKNDPEKWEREMSVGEGYVESPRFVGRALAALLSSPSSSP-SSSSPSSSSLMDRSGTIQIVAE------------------------LPNYVLKDLFASAPYLQPFVPDIKLPLSMMGARPSE 126
BLAST of EWM23240.1 vs. NCBI_GenBank
Match: gi|299470910|emb|CBN79894.1| (Short-chain dehydrogenase/reductase [Ectocarpus siliculosus]) HSP 1 Score: 103.219 bits (256), Expect = 3.442e-23 Identity = 56/147 (38.10%), Postives = 88/147 (59.86%), Query Frame = 0
Query: 1 MAVELKKEGVASFSLWPGVVMTERMAEIRKNDPEKWEREMSVGEGY-VESPRFVGRALAALLSSPSSSPSSSSSPSSSSLMDRSGTIQIVAEVAREWGVTDVDGNQPPSIRSLQFLLPNYVLKDLFASAPYLQP-FVPDIKLPLSMM 145
MA+EL++E VA S++PG+V TE+M + +P ++E + +E+P F GRA+AAL + P ++ ++G +QIVAE+A+++G TDV G+ PPSIRSL+FLLP Y+ + + VPD LP+ +M
Sbjct: 272 MAIELEEEKVAVVSVYPGIVKTEKMKSLMTKNPAEFEANTGIALSSPMETPFFTGRAVAALAADPE-------------ILKKTGKVQIVAELAKQYGFTDVGGDTPPSIRSLRFLLPTYLFPKILPEGTKIDTSSVPDWLLPMFIM 405
BLAST of EWM23240.1 vs. NCBI_GenBank
Match: gi|551597753|ref|XP_005780959.1| (short-chain dehydrogenase/reductase [Emiliania huxleyi CCMP1516] >gi|485633659|gb|EOD28530.1| short-chain dehydrogenase/reductase [Emiliania huxleyi CCMP1516]) HSP 1 Score: 100.908 bits (250), Expect = 1.686e-22 Identity = 64/156 (41.03%), Postives = 93/156 (59.62%), Query Frame = 0
Query: 1 MAVELKKEGVASFSLWPGVVMTERMAEI-RKNDPEKWEREMSVGEGYVESPRFVGRALAALLSSPSSSPSSSSSPSSSSLMDRSGTIQIVAEVAREWGVTDVDGNQPPSIRSLQFLLPNYVLKDLFASAP----YLQPFVPDIKLPLSMMGARPSE 151
MA +LK GVAS SL+PGVV TE E+ R+ + + + + G ESP F GRA+AAL + S +++ RSG +++VAE+ARE G +D+DG++PPSIRSL +L PN+V + A +++ VPDI LP S+ + P E
Sbjct: 203 MAFQLKPHGVASISLYPGVVKTEGNLEMERRGEWAEASGGLDLEAG--ESPAFSGRAVAAL-----------ARLDSEAMLARSGRVEVVAELARELGFSDIDGSRPPSIRSLAYLCPNFVFPSIEAGGGTVPRWVRDNVPDINLPWSIFASPPPE 345
BLAST of EWM23240.1 vs. NCBI_GenBank
Match: gi|676383491|ref|XP_009035024.1| (hypothetical protein AURANDRAFT_23211 [Aureococcus anophagefferens] >gi|323454332|gb|EGB10202.1| hypothetical protein AURANDRAFT_23211 [Aureococcus anophagefferens]) HSP 1 Score: 99.3673 bits (246), Expect = 3.734e-22 Identity = 62/159 (38.99%), Postives = 92/159 (57.86%), Query Frame = 0
Query: 1 MAVELKKEGVASFSLWPGVVMTERMAEIRKNDPEKWER-----EMSVGEGYVESPRFVGRALAALLSSPSSSPSSSSSPSSSSLMDRSGTIQIVAEVAREWGVTDVDGNQPPSIRSLQFLLPNYVLKDLFASA-----PYLQPFVPDIKLPLSMMGARP 149
MA++LKK GVA+ +L+PG+V TE A + D W+ +++VGE +P F GR L ALL P + L+ RSG ++++AE+A E+G DVDG +P SIRSL++LLPN+V + A +++ VPD+ LP S+ A P
Sbjct: 185 MALQLKKHGVATTALYPGLVRTE--ANLEMVDMGTWDEASGGLDLAVGE----TPAFSGRGLVALLGLPQAD-----------LLARSGNVEVIAELADEFGFDDVDGARPCSIRSLRYLLPNFVFPQVEKEAGKPVPAWIRDNVPDVLLPWSVFSAGP 326
BLAST of EWM23240.1 vs. NCBI_GenBank
Match: gi|738025943|ref|WP_035984861.1| (short-chain dehydrogenase [Leptolyngbya sp. KIOST-1]) HSP 1 Score: 97.4413 bits (241), Expect = 1.909e-21 Identity = 64/149 (42.95%), Postives = 84/149 (56.38%), Query Frame = 0
Query: 1 MAVELKKEGVASFSLWPGVVMTERM----AEIRKNDPEKWEREMSVGEGYV-ESPRFVGRALAALLSSPSSSPSSSSSPSSSSLMDRSGTIQIVAEVAREWGVTDVDGNQPPSIRSLQFLLPNYVLKDLFASAPYLQPF---VPDIKLP 141
MAVELKK V S S+WPG+V TE M AE+ S+ Y E+P GRA+AAL + P ++ RSG +QIVAE+ARE+GV D DG +P S+RSL+F+LP A+ P LQP+ VPD++LP
Sbjct: 188 MAVELKKHRVTSLSIWPGIVGTELMTQFAAEMGLGGTAGGSAADSIQAQYNWETPLLTGRAIAALAADPE-------------VLRRSGQVQIVAELAREYGVVDADGQRPASLRSLRFVLP--------AAVPGLQPYADWVPDLELP 315
BLAST of EWM23240.1 vs. NCBI_GenBank
Match: gi|219118606|ref|XP_002180072.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408329|gb|EEC48263.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 97.0561 bits (240), Expect = 2.966e-21 Identity = 59/150 (39.33%), Postives = 84/150 (56.00%), Query Frame = 0
Query: 1 MAVELKKEGVASFSLWPGVVMTERMAE-IRKNDPEKWEREMSVGEGYVESPRFVGRALAALLSSPSSSPSSSSSPSSSSLMDRSGTIQIVAEVAREWGVTDVDGNQPPSIRSLQFLLPNYVL----KDLFASAPYLQPFVPDIKLPLSMM 145
MAVEL E + S WPGVV TER E ++K D WE+ + + E+P F G+A+ A + PS+ M ++GT Q+VAE++ E+ DV+GN+PPSIRSL+FLLP+Y +D+ +PD KLP +M
Sbjct: 199 MAVELTPEDICVVSFWPGVVDTERTQESVKKGD---WEKYVGLPLDNAETPGFTGKAIIATATDPSN-------------MRKTGTYQVVAELSEEYNFFDVNGNRPPSIRSLRFLLPSYAFDQATRDMVPGW-----MIPDWKLPFWVM 327
BLAST of EWM23240.1 vs. NCBI_GenBank
Match: gi|518321219|ref|WP_019491426.1| (short-chain dehydrogenase [Calothrix sp. PCC 7103]) HSP 1 Score: 93.9745 bits (232), Expect = 3.201e-20 Identity = 64/159 (40.25%), Postives = 93/159 (58.49%), Query Frame = 0
Query: 1 MAVELKKEGVASFSLWPGVVMTERMAEI--RKNDPEKWEREMSV-GEGYV-ESPRFVGRALAALLSSPSSSPSSSSSPSSSSLMDRSGTIQIVAEVAREWGVTDVDGNQPPSIRSLQFLLPNYVLKDLFASAPYLQPF---VPDIKL--PLSMMGARPS 150
MAVELK VAS S+WPG+V TE + + + N+ + + S+ E Y E+P GR +A L + SSSS+M R+G +QIVAE+AR++G+ D DGN+P S+RSL+F+LP P L+ + +PDIK+ PL ++GA S
Sbjct: 183 MAVELKPHNVASVSIWPGIVGTEHFSSLADQFNEQDTTDPMQSIFSERYNWETPLLTGRVIAHL-----------TGESSSSIMRRTGKVQIVAEIARQYGILDQDGNRPVSLRSLRFVLP--------FGLPALRKYSSLIPDIKVPWPLLLVGALSS 322
BLAST of EWM23240.1 vs. NCBI_GenBank
Match: gi|504963532|ref|WP_015150634.1| (dehydrogenase [Oscillatoria acuminata] >gi|428003170|gb|AFY84013.1| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein [Oscillatoria acuminata PCC 6304]) HSP 1 Score: 93.2041 bits (230), Expect = 8.166e-20 Identity = 63/152 (41.45%), Postives = 88/152 (57.89%), Query Frame = 0
Query: 1 MAVELKKEGVASFSLWPGVVMTERMAEIRKN--DPEKWEREMS-VGEGYV-ESPRFVGRALAALLSSPSSSPSSSSSPSSSSLMDRSGTIQIVAEVAREWGVTDVDGNQPPSIRSLQFLLPNYVLKDLFASAPYLQPF---VPDIKLPLSMM 145
MAVELK VAS S+WPG+V TE+M+ + E +R+ S E Y E+P GRA+AAL + P+ +M +G +QIVAEVA+ +G+ D DG P S+RSL+FLLP FA P L+P+ +P++ LP S+M
Sbjct: 186 MAVELKPYNVASLSIWPGIVGTEQMSSMADQMAASETNDRQFSGFQERYNWETPLLTGRAIAALAADPT-------------VMQHTGRVQIVAEVAQRYGLVDEDGTSPGSLRSLRFLLP-------FA-VPQLRPYANLIPNLNLPWSLM 316
BLAST of EWM23240.1 vs. NCBI_GenBank
Match: gi|504995138|ref|WP_015182240.1| (dehydrogenase [Microcoleus sp. PCC 7113] >gi|428252130|gb|AFZ18089.1| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein [Microcoleus sp. PCC 7113]) HSP 1 Score: 92.8189 bits (229), Expect = 8.648e-20 Identity = 61/148 (41.22%), Postives = 84/148 (56.76%), Query Frame = 0
Query: 1 MAVELKKEGVASFSLWPGVVMTE---RMAEIRKNDPEKWEREMSVGEGYV-ESPRFVGRALAALLSSPSSSPSSSSSPSSSSLMDRSGTIQIVAEVAREWGVTDVDGNQPPSIRSLQFLLPNYVLKDLFASAPYLQPF---VPDIKLP 141
MAVELK VAS S+WPG+V TE R A + + ++ EGY E+P GRA+AAL + S++M R+G +QIVAE+A+ +G+ D DGN+P S+RSL+FLLP P L+ + VPDIK+P
Sbjct: 185 MAVELKPHNVASLSIWPGIVGTEFITRFAAEMDDSSGADSQSSAIREGYNWETPLLTGRAIAAL-------------AADSTVMRRTGRVQIVAELAQHYGLVDKDGNRPVSLRSLRFLLP--------LGLPTLRQYPWLVPDIKVP 311 The following BLAST results are available for this feature:
BLAST of EWM23240.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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