EWM23241.1, cds7432 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23241.1 vs. NCBI_GenBank
Match: gi|585104196|gb|EWM23241.1| (short-chain dehydrogenase reductase sdr, partial [Nannochloropsis gaditana]) HSP 1 Score: 416.001 bits (1068), Expect = 4.252e-147 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0
Query: 1 MHEDTKKAWRALNIGQGGATDAPTMLRRISFFSPSPYCYTLFLLSFFSHALAFSFLHMSSSPLQPLQGKVALVTGASRGIGRGIAFELAVAGATVYATARSYGEKECTEATLGGTLTTLAEDVMEALIDIPGGGKAANGRVIPLRCDHAVDPQIYSVLDTVRRDEGRLDFLVNNAFAIPPSGVAGMVGKPFWEQGAEVRGRE 202
MHEDTKKAWRALNIGQGGATDAPTMLRRISFFSPSPYCYTLFLLSFFSHALAFSFLHMSSSPLQPLQGKVALVTGASRGIGRGIAFELAVAGATVYATARSYGEKECTEATLGGTLTTLAEDVMEALIDIPGGGKAANGRVIPLRCDHAVDPQIYSVLDTVRRDEGRLDFLVNNAFAIPPSGVAGMVGKPFWEQGAEVRGRE
Sbjct: 1 MHEDTKKAWRALNIGQGGATDAPTMLRRISFFSPSPYCYTLFLLSFFSHALAFSFLHMSSSPLQPLQGKVALVTGASRGIGRGIAFELAVAGATVYATARSYGEKECTEATLGGTLTTLAEDVMEALIDIPGGGKAANGRVIPLRCDHAVDPQIYSVLDTVRRDEGRLDFLVNNAFAIPPSGVAGMVGKPFWEQGAEVRGRE 202
BLAST of EWM23241.1 vs. NCBI_GenBank
Match: gi|1127359712|gb|APR81115.1| (3-oxoacyl-[acyl-carrier protein] reductase [Minicystis rosea]) HSP 1 Score: 107.842 bits (268), Expect = 6.960e-25 Identity = 63/136 (46.32%), Postives = 80/136 (58.82%), Query Frame = 0
Query: 63 LQPLQGKVALVTGASRGIGRGIAFELAVAGATVYATARSYGEKECTEATLGGTLTTLAEDVMEALIDIPGGG-KAANGRVIPLRCDHAVDPQIYSVLDTVRRDEGRLDFLVNNAFAIPPSGVAGMVGKPFWEQGAE 197
+Q LQG++A+VTGASRG GRG+A EL AGATVY T RS + A G L + M ID AA GR IP+RCDHA Q+ +++D V R++GRLD LVNNA+ + + PFWEQ E
Sbjct: 1 MQTLQGRIAIVTGASRGAGRGVAVELGAAGATVYVTGRS--TRGAPAAGYAGFLEQASLSAMPGSIDDTADEVTAAGGRGIPVRCDHADPAQVRALVDRVEREQGRLDLLVNNAWGGHETFSLASLNAPFWEQPLE 134
BLAST of EWM23241.1 vs. NCBI_GenBank
Match: gi|1204968893|ref|WP_087711357.1| (short-chain dehydrogenase [Phormidium sp. HE10JO]) HSP 1 Score: 106.686 bits (265), Expect = 3.032e-24 Identity = 60/137 (43.80%), Postives = 81/137 (59.12%), Query Frame = 0
Query: 63 LQPLQGKVALVTGASRGIGRGIAFELAVAGATVYATARSYGEKECTEATLGGTLTTLAEDVMEALIDIPGGGKAANGRVIPLRCDHAVDPQIYSVLDTVRRD-EGRLDFLVNNAFAIPPSGVAGMVGKPFWEQGAEV 198
+Q LQGKVALVTGA+RG+G+GIA L AGATVY T RSY + +GGT L+D + A G +P++ DH+ D Q+ S+ D + + EG+LD LVNN FA +A G PFW+QG ++
Sbjct: 1 MQHLQGKVALVTGATRGLGKGIAVGLGEAGATVYITGRSYDRSNLEDREIGGT-----------LLDTQAAVEEAGGVCVPVQVDHSDDEQVRSLFDRIDNEQEGQLDLLVNNVFA-GVQAIADAYGDPFWKQGPQL 125
BLAST of EWM23241.1 vs. NCBI_GenBank
Match: gi|926435327|ref|WP_053762091.1| (short-chain dehydrogenase [Streptomyces sp. AS58] >gi|925525590|gb|KOV53499.1| short-chain dehydrogenase [Streptomyces sp. AS58]) HSP 1 Score: 105.916 bits (263), Expect = 3.329e-24 Identity = 62/130 (47.69%), Postives = 75/130 (57.69%), Query Frame = 0
Query: 64 QPLQGKVALVTGASRGIGRGIAFELAVAGATVYATARSYGEKECTEATLGGTLTTLAEDVMEALIDIPGGGKAANGRVIPLRCDHAVDPQIYSVLDTVRRDEGRLDFLVNNAFAIPPSGVAGMVGKPFWE 193
+PL GK+A+VTGASRG+G+GIA EL AGATVY T RS +L GT++ A+ V A G I L CDH D Q+ V + VR D GRLD LVNN F+ P G +GKPFWE
Sbjct: 3 RPLFGKIAVVTGASRGVGKGIALELGAAGATVYVTGRS-----VAAGSLPGTVSETADQV-----------TALGGTGIALVCDHHSDEQVAHVFERVRHDTGRLDLLVNNVFSSPDLGA--WLGKPFWE 114
BLAST of EWM23241.1 vs. NCBI_GenBank
Match: gi|919089596|ref|XP_013381822.1| (PREDICTED: dehydrogenase/reductase SDR family member 1-like [Lingula anatina]) HSP 1 Score: 105.916 bits (263), Expect = 5.176e-24 Identity = 60/137 (43.80%), Postives = 87/137 (63.50%), Query Frame = 0
Query: 63 LQPLQGKVALVTGASRGIGRGIAFELAVAGATVYATARSYGEKECTEATLGGTLTTLAEDVMEALIDIPGGGKAANGRVIPLRCDHAVDPQIYSVLDTVRRDE-GRLDFLVNNAFAIPPSGVAGMVGKPFWEQGAEV 198
L PL G+VA+VTGA+RGIGRGIA +L AGATVY T R+ K ++ +L GT AE++ ++ G+ IP++CDH+ D +I ++ D V+ ++ GRLD LVNNA++ V G + +PFWEQ E+
Sbjct: 4 LTPLAGQVAVVTGATRGIGRGIALQLGEAGATVYITGRTLKSKGNSKLSLEGT----AEEI-----------ESRGGKGIPVQCDHSKDEEIKALFDRVKAEQHGRLDILVNNAYSAVER-VLGNINQPFWEQEPEI 124
BLAST of EWM23241.1 vs. NCBI_GenBank
Match: gi|1101394325|dbj|GAU88819.1| (hypothetical protein RvY_01448 [Ramazzottius varieornatus]) HSP 1 Score: 105.531 bits (262), Expect = 5.678e-24 Identity = 58/134 (43.28%), Postives = 78/134 (58.21%), Query Frame = 0
Query: 60 SSPLQPLQGKVALVTGASRGIGRGIAFELAVAGATVYATARSYGEKECTEATLGGTLTTLAEDVMEALIDIPGGGKAANGRVIPLRCDHAVDPQIYSVLDTVRRDEGRLDFLVNNAFAIPPSGVAGMVGKPFWE 193
+SP +PL KV LVTGASRG+G+GIA +L AG TVY T R+ + G+L AE++ A G+ +P++CDH+ D I V + + DEGRLD LVNNA++ + V G GKPFWE
Sbjct: 2 TSPTRPLSNKVVLVTGASRGLGKGIALQLGEAGCTVYITGRTLDPTDAPRRP--GSLRATAEEI-----------NARGGKAVPVQCDHSKDEDIARVFEMIASDEGRLDLLVNNAYSAVNALVTGF-GKPFWE 121
BLAST of EWM23241.1 vs. NCBI_GenBank
Match: gi|919084108|ref|XP_013379355.1| (PREDICTED: dehydrogenase/reductase SDR family member 1-like [Lingula anatina]) HSP 1 Score: 105.916 bits (263), Expect = 6.179e-24 Identity = 60/137 (43.80%), Postives = 86/137 (62.77%), Query Frame = 0
Query: 63 LQPLQGKVALVTGASRGIGRGIAFELAVAGATVYATARSYGEKECTEATLGGTLTTLAEDVMEALIDIPGGGKAANGRVIPLRCDHAVDPQIYSVLDTVRRDE-GRLDFLVNNAFAIPPSGVAGMVGKPFWEQGAEV 198
L PL G+VA+VTGA+RGIGRGIA +L AGATVY T R+ ++ +L GT AE++ ++ G+ IP++CDH+ D +I ++ D VR ++ GRLD LVNNA++ V G + +PFWEQ E+
Sbjct: 4 LTPLAGQVAIVTGATRGIGRGIALQLGEAGATVYITGRTLKSNGNSKLSLEGT----AEEI-----------ESRGGKGIPVQCDHSKDEEIKALFDRVRAEQHGRLDILVNNAYS-AVERVLGNINQPFWEQEPEI 124
BLAST of EWM23241.1 vs. NCBI_GenBank
Match: gi|1057444744|ref|WP_068790470.1| (short-chain dehydrogenase [Phormidium willei] >gi|1025907162|gb|OAB56051.1| short-chain dehydrogenase [Phormidium willei BDU 130791]) HSP 1 Score: 105.531 bits (262), Expect = 1.035e-23 Identity = 60/137 (43.80%), Postives = 80/137 (58.39%), Query Frame = 0
Query: 63 LQPLQGKVALVTGASRGIGRGIAFELAVAGATVYATARSYGEKECTEATLGGTLTTLAEDVMEALIDIPGGGKAANGRVIPLRCDHAVDPQIYSVLDTVRRD-EGRLDFLVNNAFAIPPSGVAGMVGKPFWEQGAEV 198
+Q LQGKVALVTGA+RG+G+GIA L AGATVY T RSY + +GGT L+D + A G +P++ DH D Q+ S+ D + + EG+LD LVNN FA +A G PFW+QG ++
Sbjct: 1 MQHLQGKVALVTGATRGLGKGIAVGLGEAGATVYITGRSYDRSNLEDREIGGT-----------LLDTQAAVEEAGGVCVPVQVDHNDDEQVRSLFDRIDNEQEGQLDLLVNNVFA-GVQAIAEAYGDPFWKQGPQL 125
BLAST of EWM23241.1 vs. NCBI_GenBank
Match: gi|1205886984|gb|OWF37972.1| (Dehydrogenase/reductase SDR family member 1 [Mizuhopecten yessoensis]) HSP 1 Score: 103.605 bits (257), Expect = 1.252e-23 Identity = 63/152 (41.45%), Postives = 88/152 (57.89%), Query Frame = 0
Query: 44 LSFFSHALAFSFLHMSSSPLQPLQGKVALVTGASRGIGRGIAFELAVAGATVYATARSYGEKECTEATLGGTLTTLAEDVMEALIDIPGGGKAANGRVIPLRCDHAVDPQIYSVLDTVRRD-EGRLDFLVNNAFAIPPSGVAGMVGKPFWEQ 194
L+ F H L M+SS + L GKV +VTGA+RGIG+GIA +L AGATVY T R+ + ++ +GG+LT A ++ E G+ IP++CDH D +I + D V+R+ EG+LD LVNNAF + + PFWEQ
Sbjct: 5 LAHFPH-----ILEMASSG-RKLAGKVCIVTGATRGIGKGIALQLGEAGATVYITGRTLVAAK--DSKVGGSLTDTAREIEE-----------RGGKCIPVQCDHTKDEEIQQLFDKVKREQEGQLDILVNNAFN-AAKAIFDQMKVPFWEQ 136
BLAST of EWM23241.1 vs. NCBI_GenBank
Match: gi|1054210124|ref|WP_066188164.1| (oxidoreductase [Gracilibacillus timonensis]) HSP 1 Score: 103.219 bits (256), Expect = 2.623e-23 Identity = 59/133 (44.36%), Postives = 77/133 (57.89%), Query Frame = 0
Query: 63 LQPLQGKVALVTGASRGIGRGIAFELAVAGATVYATARSYGEKECTE--ATLGGTLTTLAEDVMEALIDIPGGGKAANGRVIPLRCDHAVDPQIYSVLDTVRRDEGRLDFLVNNAFAIPPSGVAGMVGKPFWE 193
++PL+GK+ALVTGASRG GRGIA ELA AGATVY T RS K T+ T + + D GG A I +RCDH D + +V+D +R+++G+LD LVNN + GV KPFW+
Sbjct: 1 MKPLEGKIALVTGASRGAGRGIAIELAQAGATVYLTGRSTKHKSINNWPGTIDDTASKITSD----------GGNA-----IAVRCDHTKDVETEAVIDKIRQEQGKLDILVNNVWGAHDLGVE---AKPFWQ 115 The following BLAST results are available for this feature:
BLAST of EWM23241.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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