EWM23243.1, cds7430 (CDS) Nannochloropsis gaditana

Overview
NameEWM23243.1
Unique Namecds7430
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:615433..615465 +
Alignment locationCM002471.1:615536..615574 +
Alignment locationCM002471.1:615669..615761 +
Alignment locationCM002471.1:615805..615980 +
Alignment locationCM002471.1:616040..616109 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23243.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101425g1.9071.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:615433..615465 +
CM002471.1supercontigCM002471.1:615536..615574 +
CM002471.1supercontigCM002471.1:615669..615761 +
CM002471.1supercontigCM002471.1:615805..615980 +
CM002471.1supercontigCM002471.1:616040..616109 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23243.1 vs. NCBI_GenBank
Match: gi|585104200|gb|EWM23243.1| (hypothetical protein Naga_101425g1 [Nannochloropsis gaditana])

HSP 1 Score: 273.092 bits (697), Expect = 8.674e-93
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0 
Query:    1 MGSRGVMDSASRNDGLNGAPPSQRGGIWKGEVVETPLLYACDVLMAIWKKNALYCWEGGREGGRMPEVENQKYCLKSSQSTIRMSFSLCPPSLPPPSLLCGQEGGREGGREGGWKRRGGRRKEGQSVIRAQCVCVV 136
            MGSRGVMDSASRNDGLNGAPPSQRGGIWKGEVVETPLLYACDVLMAIWKKNALYCWEGGREGGRMPEVENQKYCLKSSQSTIRMSFSLCPPSLPPPSLLCGQEGGREGGREGGWKRRGGRRKEGQSVIRAQCVCVV
Sbjct:    1 MGSRGVMDSASRNDGLNGAPPSQRGGIWKGEVVETPLLYACDVLMAIWKKNALYCWEGGREGGRMPEVENQKYCLKSSQSTIRMSFSLCPPSLPPPSLLCGQEGGREGGREGGWKRRGGRRKEGQSVIRAQCVCVV 136
The following BLAST results are available for this feature:
BLAST of EWM23243.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104200|gb|EWM23243.1|8.674e-93100.00hypothetical protein Naga_101425g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7448rna7448Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications