EWM23244.1, cds7429 (CDS) Nannochloropsis gaditana

Overview
NameEWM23244.1
Unique Namecds7429
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:614647..615280 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23244.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101374g1.802.mrna
GbkeyCDS
End range.
End range615280
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:614647..615280 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM23244.1 vs. NCBI_GenBank
Match: gi|585104202|gb|EWM23244.1| (hypothetical protein Naga_101374g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 428.713 bits (1101), Expect = 6.470e-152
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0 
Query:    1 MDIPAAPAPQPPPMHVVEEHGGGMEGGRAGGNTTAAKLLYKAIQENDLETIKRLVEGKVCDSYKEESAKYWAGKRIVGRVRKCPEEREENDSMWAPLWTLSSSSLSFSLFLAPSSFLLLPPSFLVSFFFLFLSSPLFSLLPFFCPRHDLTPDGLNIDLLWHLPHLRLNYLPLPPATSPPVTIGRAAFAVDDAAAELRHGRGREGGREEGRE 211
            MDIPAAPAPQPPPMHVVEEHGGGMEGGRAGGNTTAAKLLYKAIQENDLETIKRLVEGKVCDSYKEESAKYWAGKRIVGRVRKCPEEREENDSMWAPLWTLSSSSLSFSLFLAPSSFLLLPPSFLVSFFFLFLSSPLFSLLPFFCPRHDLTPDGLNIDLLWHLPHLRLNYLPLPPATSPPVTIGRAAFAVDDAAAELRHGRGREGGREEGRE
Sbjct:    1 MDIPAAPAPQPPPMHVVEEHGGGMEGGRAGGNTTAAKLLYKAIQENDLETIKRLVEGKVCDSYKEESAKYWAGKRIVGRVRKCPEEREENDSMWAPLWTLSSSSLSFSLFLAPSSFLLLPPSFLVSFFFLFLSSPLFSLLPFFCPRHDLTPDGLNIDLLWHLPHLRLNYLPLPPATSPPVTIGRAAFAVDDAAAELRHGRGREGGREEGRE 211
The following BLAST results are available for this feature:
BLAST of EWM23244.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104202|gb|EWM23244.1|6.470e-152100.00hypothetical protein Naga_101374g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7447rna7447Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications