EWM23245.1, cds7428 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23245.1 vs. NCBI_GenBank
Match: gi|585104207|gb|EWM23245.1| (hypothetical protein Naga_101786g1 [Nannochloropsis gaditana]) HSP 1 Score: 697.967 bits (1800), Expect = 0.000e+0 Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0
Query: 1 MGREGEVFPTAPHPLISMKEADKIKTIVVQGVIVVLAALCLFWTVNYASAQVSLEEKGNSQLRTSDISPFKMAMEGSEGFFDDIRDAGWKRLMERIQTTPSCAASCAAEPAARWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGTEGATPVPAMKFMESLSQRGFVIFHKEPNTLGCGGRCIEYAFVKLASPEVRLAGIVNNTRSRT 334
MGREGEVFPTAPHPLISMKEADKIKTIVVQGVIVVLAALCLFWTVNYASAQVSLEEKGNSQLRTSDISPFKMAMEGSEGFFDDIRDAGWKRLMERIQTTPSCAASCAAEPAARWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGTEGATPVPAMKFMESLSQRGFVIFHKEPNTLGCGGRCIEYAFVKLASPEVRLAGIVNNTRSRT
Sbjct: 1 MGREGEVFPTAPHPLISMKEADKIKTIVVQGVIVVLAALCLFWTVNYASAQVSLEEKGNSQLRTSDISPFKMAMEGSEGFFDDIRDAGWKRLMERIQTTPSCAASCAAEPAARWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGTEGATPVPAMKFMESLSQRGFVIFHKEPNTLGCGGRCIEYAFVKLASPEVRLAGIVNNTRSRT 334
BLAST of EWM23245.1 vs. NCBI_GenBank
Match: gi|585104212|gb|EWM23246.1| (hypothetical protein Naga_101622g1 [Nannochloropsis gaditana]) HSP 1 Score: 639.032 bits (1647), Expect = 0.000e+0 Identity = 306/317 (96.53%), Postives = 309/317 (97.48%), Query Frame = 0
Query: 18 MKEADKIKTIVVQGVIVVLAALCLFWTVNYASAQVSLEEKGNSQLRTSDISPFKMAMEGSEGFFDDIRDAGWKRLMERIQTTPSCAASCAAEPAARWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGTEGATPVPAMKFMESLSQRGFVIFHKEPNTLGCGGRCIEYAFVKLASPEVRLAGIVNNTRSRT 334
MKEA KIKTIVVQGVIVVLAALCLFWT+NYASAQVSLE+KGNSQLRTSDISPFKMAMEGSEGFFDDIRDAGWKRLMERIQTTPSCAASCAAEPAA WYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGTEGATPVPAMKFMESLSQRGFVIFHKEPN GG CIEYAFV+LASPE RLAGIVNNTRSRT
Sbjct: 1 MKEAGKIKTIVVQGVIVVLAALCLFWTMNYASAQVSLEKKGNSQLRTSDISPFKMAMEGSEGFFDDIRDAGWKRLMERIQTTPSCAASCAAEPAAHWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGTEGATPVPAMKFMESLSQRGFVIFHKEPNIQWAGGACIEYAFVRLASPEARLAGIVNNTRSRT 317
BLAST of EWM23245.1 vs. NCBI_GenBank
Match: gi|553193072|ref|XP_005855704.1| (hypothetical protein NGA_0645500 [Nannochloropsis gaditana CCMP526] >gi|422293356|gb|EKU20656.1| hypothetical protein NGA_0645500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 552.362 bits (1422), Expect = 0.000e+0 Identity = 261/263 (99.24%), Postives = 262/263 (99.62%), Query Frame = 0
Query: 72 MAMEGSEGFFDDIRDAGWKRLMERIQTTPSCAASCAAEPAARWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGTEGATPVPAMKFMESLSQRGFVIFHKEPNTLGCGGRCIEYAFVKLASPEVRLAGIVNNTRSRT 334
MAMEGSEGFFDDIRDAGWKRLMERIQTTPSCAASCAAEPAARWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGTEGATPVPAMKFMESLSQRGFVIFHKEPNTLGCGGRCIEYAFV+LASPE RLAGIVNNTRSRT
Sbjct: 1 MAMEGSEGFFDDIRDAGWKRLMERIQTTPSCAASCAAEPAARWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGTEGATPVPAMKFMESLSQRGFVIFHKEPNTLGCGGRCIEYAFVRLASPEARLAGIVNNTRSRT 263
BLAST of EWM23245.1 vs. NCBI_GenBank
Match: gi|219124571|ref|XP_002182574.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405920|gb|EEC45861.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 188.734 bits (478), Expect = 1.664e-53 Identity = 114/314 (36.31%), Postives = 161/314 (51.27%), Query Frame = 0
Query: 27 IVVQGVIVVLAALCLFWT---VNYASAQVSLEEKGNSQLRTSDISPFK--MAMEGSEGFFDDIRDAGWKRLMERI----QTTPSCAASCAAEPAARWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPA-CEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYK-------------TLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGTEGATPVPAMKFMESLSQRGFVIFHKEPNTLGCGGRCIEYAFVKLA 317
I+ GV++ +AA+ + W+ ++ +S Q + ++ P+ +A + S GFFDDI D W R+ Q E RWY NN EP+F+C R+G GDG KWVCDP R+ AK + CL+YS+GS+ ++ FE+S+L CEIH FD DRP D +I +HPWGL + D Y T Q I++ L+H NR ID+ KIDCEGCEWSSY+ W+DK +RQI IE+H + + F S F +F KE N C E +++KL+
Sbjct: 45 ILFIGVMLSIAAVDI-WSRRRLSTSSDQQAFRTSVSTNQHQKSFEPWSTGLAAKQSFGFFDDIGDTAWSRMRNNAVNFQQYRKPQKPDTGNEDPWRWYINNLEPDFSCPHAARVGGHGDGPKWVCDPHRLQAKDD----CLIYSIGSSGNYLFEDSLLGLAGKGQCEIHVFDFGDFDRPEN--ADNRIFYHPWGLGSSYDDVYSDRIKKIAGEQEVLTFQEILRRLNHENRTIDLFKIDCEGCEWSSYKDWIDKD--LRQIQIEVHGLPSARSGISGSDFYNSFRNNSFAMFSKEHNQFTKS--CYELSYIKLS 347
BLAST of EWM23245.1 vs. NCBI_GenBank
Match: gi|145356262|ref|XP_001422352.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144582593|gb|ABP00669.1| predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 181.415 bits (459), Expect = 8.225e-51 Identity = 101/236 (42.80%), Postives = 134/236 (56.78%), Query Frame = 0
Query: 114 WYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGL--SNKNDGK-YKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGT-----------------------EGAT-----PVPAMKFMESLSQRGFVIFHKEPNTLG--CGGRCIEYAFVKL 316
WYQ+N EP TC E R+G G+GGK +CDP R+ A+ G L+YSVGS +DFSFEE+I+RD+S ACEIH FD T+ + KP + F PWGL + + DG K+L ++ L H R ID+LKIDCEGCEWS+Y SW+D +R+ ++L+E+H GT GA PV A +F L F IFHKEPN C+E+AF++
Sbjct: 104 WYQDNVEPAVTCAREERVGPAGEGGKCLCDPNRLRARGADG---LIYSVGSFDDFSFEEAIMRDVSSACEIHVFDHTVSNPRNKPCG---VHFQPWGLGGAREPDGSDLKSLADVVVALGHKGRTIDVLKIDCEGCEWSTYGSWIDADVRVDEMLVEIHAGTIDSNLKEVHQSWLSLIVGDQLFGRGALDPLREPV-AKRFFRRLHDENFYIFHKEPNIKYSLLHKMCVEFAFIRF 332
BLAST of EWM23245.1 vs. NCBI_GenBank
Match: gi|219128751|ref|XP_002184569.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404019|gb|EEC43968.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 176.792 bits (447), Expect = 3.555e-49 Identity = 110/321 (34.27%), Postives = 164/321 (51.09%), Query Frame = 0
Query: 23 KIKTIVVQGV--IVVLAALCLFWTVNYASAQVSLEEKG---NSQLRTSDISPFK--MAMEGSEGFFDDIRDAGWKRLMERIQT-----TPSCAASCAAEPAARWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPA-CEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYK-------------TLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGTEGATPVPAMKFMESLSQRGFVIFHKEPNTLGCGGRCIEYAFVKLA 317
KI++ V+ V +V +AA+ +++ + A ++ N Q+ P +A S GFFDDI D W ++ ++ T P + +A+P +WY N +P+FTC R+G GDG KWVCDP R+ + CL+YS GSN ++ FE+S+L + CEIH FD DRP P D++I +H WGL + D Y T Q I + L+H +R ID+ KIDCEGCEW +Y+ W+ G+ RQ+ IE+H G F ++ F +F KE N C E+++VKL+
Sbjct: 17 KIRSTVITLVAFLVSIAAIDVWFQRSTAVSESYATRAAIAVNQQVAVKSFEPISTGLAARQSFGFFDDIGDNSWNKMRKKAVTFQQYQNPKNPNAGSADPW-KWYIRNLQPDFTCQHVIRVGGHGDGPKWVCDPHRLRTR----DNCLIYSFGSNGNYLFEDSMLDLVGKGQCEIHVFDFGDFDRPQNP--DKRIHYHQWGLGSSYDQAYNEKIKKRAGEQEVLTFQEIQRRLNHEDRTIDLFKIDCEGCEWRNYKDWI--GVDARQVQIEVH----GLPSSNGSDFFDAFRDNSFAMFSKEHNQY--TKHCYEFSYVKLS 322
BLAST of EWM23245.1 vs. NCBI_GenBank
Match: gi|308799960|ref|XP_003074761.1| (predicted CDS, putative protein family member, with a coiled coil-4 domain (ISS) [Ostreococcus tauri]) HSP 1 Score: 174.481 bits (441), Expect = 3.468e-48 Identity = 99/242 (40.91%), Postives = 127/242 (52.48%), Query Frame = 0
Query: 104 ASCAAEPAARWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGT-----------------------EGATPVP----AMKFMESLSQRGFVIFHKEPNTL--GCGGRCIEYAFVKL 316
+S + A WYQ+N EP TC E RIG G+GGKW+CDP R+ AK G CL+YSVGS++DFSFEE+I++D+S ACEIH FD DR G K+L I+ L H R IDILKIDCEGCEWS+Y SW D +R+ ++L+E+H GT GA V A +F + L F IFHKEPN C+E+ F++
Sbjct: 112 SSGGTQRADGWYQDNVEPAVTCAREERIGPAGEGGKWLCDPNRLRAK---GTDCLIYSVGSSDDFSFEEAIMQDVSSACEIHVFD----DRTR-------------GAHEPAGSALKSLADIVAALGHKGRTIDILKIDCEGCEWSTYGSWFDADVRVDEMLVEIHAGTIISNSNEIHQSWLSLIVGEQLFGRGALEVSREPVAKRFFQRLYDETFYIFHKEPNIKYSRLHKMCVEFGFIRF 333
BLAST of EWM23245.1 vs. NCBI_GenBank
Match: gi|219126078|ref|XP_002183292.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405048|gb|EEC44992.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 173.711 bits (439), Expect = 4.254e-48 Identity = 110/316 (34.81%), Postives = 165/316 (52.22%), Query Frame = 0
Query: 32 VIVVLAALCL-FWTVNYASAQVSLEEK------GNSQLRTSDISPFKMAMEGSEGFFDDIRDAGWKRLMER----IQTTPSCAASCAAEPAARWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDI-SPACEIHTFDPTIGDRPAKPLTDEQITFHPWGLSN--------------KNDGK--YKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGTE---GATPVPAMKFMESLSQRGFVIFHKEPNTLGCGGRCIEYAFVKL 316
V+ VL+ L FW +A SLE + G +++S +A + S GFFDDI D W+++ ER IQ + + +ARWY N EP+FTC +R+G GDG KW CDP R++ + CL+YSVGS + +E+ ++ + CEIH FDP R ++ + D+ I +H WG S+ + GK KT Q +++L H +R I +LK+DCEGCEW +Y W++ + IRQ+LIE HQ + G + F + + F +F KE N + G C+E+ +VKL
Sbjct: 20 VLTVLSLLSFGFWNC-FARTGDSLESEIRKDALGAPNGMPAELST-ALAYKQSFGFFDDILDGAWRKMQERARIFIQYSNPHNPNQGQTDSARWYVENLEPDFTCPQVQRVGGHGDGPKWTCDPNRLLKEEP----CLIYSVGSAGKYQWEDGLIHLLGGTHCEIHVFDPGAFAR-SRDVEDKNIHYHQWGFSSSYVKSFVPDIYSMGEASGKPVMKTFQDTLRELGHVHRTIHVLKLDCEGCEWVNYRDWIE--LDIRQVLIETHQLPDRRAGPGALTPSTFFDEFRKNNFAMFSKEANVIA-QGTCVEFGYVKL 325
BLAST of EWM23245.1 vs. NCBI_GenBank
Match: gi|145356108|ref|XP_001422281.1| (hypothetical protein OSTLU_93976, partial [Ostreococcus lucimarinus CCE9901] >gi|144582522|gb|ABP00598.1| hypothetical protein OSTLU_93976, partial [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 172.94 bits (437), Expect = 6.627e-48 Identity = 102/241 (42.32%), Postives = 132/241 (54.77%), Query Frame = 0
Query: 109 EPAARWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGL--SNKNDGK-YKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGT-----------------------EGAT-----PVPAMKFMESLSQRGFVIFHKEPNTL--GCGGRCIEYAFVKL 316
+ A WYQ+N EP TC E R G G+GGK +CDP R+ A+ G CL+YSVGS +DFSFEE+I RD+S A EIH FD T+ + KP + FHP GL + + DG K L I+ L H R ID+LKIDCEGCEWS+Y SW D +R+ ++L+E+H GT GA PV A +F+ L F IFHKEPN C+E+A ++
Sbjct: 77 QKADGWYQDNVEPAVTCAREERAGPAGEGGKGLCDPNRLRAQ---GADCLIYSVGSFDDFSFEEAITRDVSSAREIHAFDHTVSNPRNKPCG---VHFHPLGLGGAREPDGSDLKGLADIVVALGHKGRTIDVLKIDCEGCEWSTYGSWFDADVRVDEMLVEIHAGTIDSNLNEIHQSWLSLIVGEQLFGRGALDPSREPV-AKRFLRRLYDENFYIFHKEPNIKYSRLHKMCVEFALIRF 310
BLAST of EWM23245.1 vs. NCBI_GenBank
Match: gi|1210513880|dbj|GAX27179.1| (hypothetical protein FisN_13Lh271 [Fistulifera solaris]) HSP 1 Score: 169.088 bits (427), Expect = 1.234e-46 Identity = 107/294 (36.39%), Postives = 153/294 (52.04%), Query Frame = 0
Query: 53 SLEEKGNSQLRTSDISPFKMAMEGSEGFFDDIRDAGWKRLMERIQTTPSCAASCAAEP------AARWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIV--AKAEAGHGCLVYSVGSNNDFSFEESILRDIS-PACEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYK-----------TLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQ----GTEGATP---VPAMK---FMESLSQRGFVIFHKEPNTLGCGGRCIEYAFVKL 316
++EE +S T I + +A + S GFFDDI + W+RL + + P+ +P A+W NW+P F C +R+IG G G KW CD R+V A+ CLVYS+GS ++ +E ++ P CEIH FD GD + I +H WGL + KY+ + Q I + L H +R ID+ KIDCEGCEW +Y+ W+ + IRQI+IE H E TP +PAMK F ++L GF +F KE N+ GR +E++F+KL
Sbjct: 4 AMEESTDST--TIVIPEYSLAYDQSFGFFDDITNENWQRLYQN-RARPARHYRVLDDPLQGIKFPAQWNFFNWDPYFVCPHKRKIGGLGGGPKWTCDAERLVRIARERPDASCLVYSIGSRGNYLWELGLVELWGGPLCEIHVFD--FGDFQRNETENLNIHYHQWGLGSSYSTKYRKRAIARGQTFLSFQEIRRRLGHEDRTIDLFKIDCEGCEWHNYKDWVSEN--IRQIMIETHDLPSPNREKDTPFGILPAMKVTDFFDALKDNGFALFSKEVNSQRGFGRSVEWSFIKL 290 The following BLAST results are available for this feature:
BLAST of EWM23245.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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