EWM23248.1, cds7425 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23248.1 vs. NCBI_GenBank
Match: gi|585104218|gb|EWM23248.1| (hypothetical protein Naga_101341g2, partial [Nannochloropsis gaditana]) HSP 1 Score: 336.265 bits (861), Expect = 5.704e-117 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0 Query: 1 MRWRLIFVLSSHFIVRFLLFPFLPLPFQGSCAQHERSQRNMVNESTSSTPSSASASAAAPFLSPHQKVTASPHAQGEPPIPPHIIRGLGDRSYEKRKNAALDLEQHVKYLTERNDKTRLQATLHLLGQEFCTSTNSNHRKGGLIALAAAAIGLMGSIEVLLYP 163 MRWRLIFVLSSHFIVRFLLFPFLPLPFQGSCAQHERSQRNMVNESTSSTPSSASASAAAPFLSPHQKVTASPHAQGEPPIPPHIIRGLGDRSYEKRKNAALDLEQHVKYLTERNDKTRLQATLHLLGQEFCTSTNSNHRKGGLIALAAAAIGLMGSIEVLLYP Sbjct: 1 MRWRLIFVLSSHFIVRFLLFPFLPLPFQGSCAQHERSQRNMVNESTSSTPSSASASAAAPFLSPHQKVTASPHAQGEPPIPPHIIRGLGDRSYEKRKNAALDLEQHVKYLTERNDKTRLQATLHLLGQEFCTSTNSNHRKGGLIALAAAAIGLMGSIEVLLYP 163
BLAST of EWM23248.1 vs. NCBI_GenBank
Match: gi|676394005|ref|XP_009040280.1| (hypothetical protein AURANDRAFT_38752, partial [Aureococcus anophagefferens] >gi|323449034|gb|EGB04925.1| hypothetical protein AURANDRAFT_38752, partial [Aureococcus anophagefferens]) HSP 1 Score: 115.931 bits (289), Expect = 4.959e-27 Identity = 55/99 (55.56%), Postives = 72/99 (72.73%), Query Frame = 0 Query: 63 SPHQKVTASPHAQGEPPIPPHIIRGLGDRSYEKRKNAALDLEQHVKYLTERNDKTRLQATLHLLGQEFCTSTNSNHRKGGLIALAAAAIGLMGSIEVLL 161 +P +V ++P E P+PP I+R LGDRSY+KRKNAAL++E +K L E ND R+ + + +LGQ+F TSTN+NHRKGGLI LAA AIGLM I + L Sbjct: 3 TPSVEVVSAP---SESPLPPAILRSLGDRSYDKRKNAALEIEALIKALQENNDTDRICSVIAMLGQDFATSTNANHRKGGLIGLAATAIGLMQDIRLYL 98
BLAST of EWM23248.1 vs. NCBI_GenBank
Match: gi|299470767|emb|CBN79813.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 107.842 bits (268), Expect = 3.821e-24 Identity = 50/86 (58.14%), Postives = 65/86 (75.58%), Query Frame = 0 Query: 76 GEPPIPPHIIRGLGDRSYEKRKNAALDLEQHVKYLTERNDKTRLQATLHLLGQEFCTSTNSNHRKGGLIALAAAAIGLMGSIEVLL 161 E P+ P I+RGLGDRSY+KRKNAAL++E +K L + N+ R+ + + LLGQ+F TSTN NHRKGGLI LAA AIGLM + ++ L Sbjct: 11 AESPLAPAILRGLGDRSYDKRKNAALEIEALIKTLEDNNETDRICSIIVLLGQDFATSTNPNHRKGGLIGLAATAIGLMSATKLYL 96
BLAST of EWM23248.1 vs. NCBI_GenBank
Match: gi|676392601|ref|XP_009039578.1| (hypothetical protein AURANDRAFT_66238 [Aureococcus anophagefferens] >gi|323449854|gb|EGB05739.1| hypothetical protein AURANDRAFT_66238 [Aureococcus anophagefferens]) HSP 1 Score: 102.064 bits (253), Expect = 2.075e-23 Identity = 48/78 (61.54%), Postives = 60/78 (76.92%), Query Frame = 0 Query: 84 IIRGLGDRSYEKRKNAALDLEQHVKYLTERNDKTRLQATLHLLGQEFCTSTNSNHRKGGLIALAAAAIGLMGSIEVLL 161 I+R LGDRSY+KRKNAAL++E +K L E ND R+ + + +LGQ+F TSTN+NHRKGGLI LAA AIGLM I + L Sbjct: 21 ILRSLGDRSYDKRKNAALEIEALIKALQENNDTDRICSVIAMLGQDFATSTNANHRKGGLIGLAATAIGLMHDIRLYL 98
BLAST of EWM23248.1 vs. NCBI_GenBank
Match: gi|397643930|gb|EJK76164.1| (hypothetical protein THAOC_02086 [Thalassiosira oceanica]) HSP 1 Score: 104.375 bits (259), Expect = 5.180e-23 Identity = 49/91 (53.85%), Postives = 69/91 (75.82%), Query Frame = 0 Query: 77 EPPIPPHIIRGLGDRSYEKRKNAALDLEQHVKYLTERNDKTRLQATLHLLGQEFCTSTNSNHRKGGLIALAAAAIGLMGS----IEVLLYP 163 E P+PP + R LGDRSY+KRKNAAL++EQ VK L E ++ +Q+ + +L ++FCTS N+N+RKGGLI +AA +IGLMG+ +E LL+P Sbjct: 151 ESPLPPLVQRSLGDRSYDKRKNAALEIEQLVKSLNEAHNVPMIQSIISILAKDFCTSMNANYRKGGLIGIAATSIGLMGNTRSHLEGLLFP 241
BLAST of EWM23248.1 vs. NCBI_GenBank
Match: gi|223994285|ref|XP_002286826.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220978141|gb|EED96467.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 103.605 bits (257), Expect = 1.179e-22 Identity = 49/89 (55.06%), Postives = 69/89 (77.53%), Query Frame = 0 Query: 79 PIPPHIIRGLGDRSYEKRKNAALDLEQHVKYLTERNDKTRLQATLHLLGQEFCTSTNSNHRKGGLIALAAAAIGLMGS----IEVLLYP 163 P+PP + R LGDRSY+KRKNAAL++EQ VK L+E ++ +Q+ + +L ++FCTS N+N+RKGGLI +AA AIGLMG+ +E LL+P Sbjct: 2 PLPPLVQRSLGDRSYDKRKNAALEIEQLVKSLSEAHNVPMIQSIIAVLAKDFCTSMNANYRKGGLIGIAATAIGLMGNTRQFLEGLLFP 90
BLAST of EWM23248.1 vs. NCBI_GenBank
Match: gi|1072227847|gb|OEU12585.1| (ARM repeat-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 101.679 bits (252), Expect = 5.630e-22 Identity = 46/77 (59.74%), Postives = 58/77 (75.32%), Query Frame = 0 Query: 79 PIPPHIIRGLGDRSYEKRKNAALDLEQHVKYLTERNDKTRLQATLHLLGQEFCTSTNSNHRKGGLIALAAAAIGLMG 155 P+PP I+R LGDRS EKRKNAAL++E VK L E N+ +Q + +L ++FCTS NSN+RKGGL+ LAA IGLMG Sbjct: 5 PLPPMILRSLGDRSNEKRKNAALEIEALVKNLQEANNLLMIQNVIEILSKDFCTSMNSNYRKGGLVGLAATGIGLMG 81
BLAST of EWM23248.1 vs. NCBI_GenBank
Match: gi|219128000|ref|XP_002184212.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404443|gb|EEC44390.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 95.1301 bits (235), Expect = 8.478e-20 Identity = 44/77 (57.14%), Postives = 58/77 (75.32%), Query Frame = 0 Query: 77 EPPIPPHIIRGLGDRSYEKRKNAALDLEQHVKYLTERNDKTRLQATLHLLGQEFCTSTNSNHRKGGLIALAAAAIGL 153 E P+PP + RGLGDRS +KRKNAAL++E +K L E N+ +++ + +L +FCTS NSN+RKGGLI LAA AIGL Sbjct: 2 ESPLPPVVQRGLGDRSNDKRKNAALEIEALIKSLQEANNIGMIRSVITVLSNDFCTSMNSNYRKGGLIGLAATAIGL 78
BLAST of EWM23248.1 vs. NCBI_GenBank
Match: gi|1210515182|dbj|GAX25894.1| (vacuole morphology and inheritance protein 14 [Fistulifera solaris]) HSP 1 Score: 92.8189 bits (229), Expect = 6.058e-19 Identity = 52/112 (46.43%), Postives = 68/112 (60.71%), Query Frame = 0 Query: 43 NESTSSTPSSASASAAAPFLSPHQKVTASPHAQGEPPIPPHIIRGLGDRSYEKRKNAALDLEQHVKYLTERNDKTRLQATLHLLGQEFCTSTNSNHRKGGLIALAAAAIGLM 154 NES P A+A + Q A E P+PP + RGLGDRS EKRKNAA++LE ++ L E + T + L +L ++FCTS NSN+RKGGL+ LAA AIGL+ Sbjct: 36 NESRLHQPHGAAAFVTNQMIPSQQPQQALLQLSLESPLPPLLQRGLGDRSNEKRKNAAMELEALIQTLPEHS--TLIDTILQILAKDFCTSMNSNYRKGGLMGLAATAIGLL 145
BLAST of EWM23248.1 vs. NCBI_GenBank
Match: gi|1210512817|dbj|GAX28115.1| (vacuole morphology and inheritance protein 14 [Fistulifera solaris]) HSP 1 Score: 92.8189 bits (229), Expect = 6.886e-19 Identity = 44/78 (56.41%), Postives = 59/78 (75.64%), Query Frame = 0 Query: 77 EPPIPPHIIRGLGDRSYEKRKNAALDLEQHVKYLTERNDKTRLQATLHLLGQEFCTSTNSNHRKGGLIALAAAAIGLM 154 E P+PP + RGLGDRS EKRKNAA++LE +K L E + T + + + +L ++FCTS NSN+RKGGL+ LAA AIGL+ Sbjct: 25 ESPLPPLLQRGLGDRSNEKRKNAAMELEALIKTLPE--NTTLIDSIIQILAKDFCTSMNSNYRKGGLMGLAATAIGLL 100 The following BLAST results are available for this feature:
BLAST of EWM23248.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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