EWM23269.1, cds7406 (CDS) Nannochloropsis gaditana

Overview
NameEWM23269.1
Unique Namecds7406
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:556007..556037 +
Alignment locationCM002471.1:556085..556186 +
Alignment locationCM002471.1:556593..556843 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23269.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100829g3.9009.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:556007..556037 +
CM002471.1supercontigCM002471.1:556085..556186 +
CM002471.1supercontigCM002471.1:556593..556843 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM23269.1 vs. NCBI_GenBank
Match: gi|585104266|gb|EWM23269.1| (hypothetical protein Naga_100829g3 [Nannochloropsis gaditana])

HSP 1 Score: 257.684 bits (657), Expect = 5.351e-87
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 
Query:    1 MTCLRLIGTKESALLVVEDNQEEVCTTWPLPSKYISLFISKTSLLREAKGTARGDKASVVCIVSRVVFTGSRGMKTLDIKDPFSHASKVSMARSGLMKTLSLLTAHLARGVERAKDRSLMGRGPAWL 127
            MTCLRLIGTKESALLVVEDNQEEVCTTWPLPSKYISLFISKTSLLREAKGTARGDKASVVCIVSRVVFTGSRGMKTLDIKDPFSHASKVSMARSGLMKTLSLLTAHLARGVERAKDRSLMGRGPAWL
Sbjct:    1 MTCLRLIGTKESALLVVEDNQEEVCTTWPLPSKYISLFISKTSLLREAKGTARGDKASVVCIVSRVVFTGSRGMKTLDIKDPFSHASKVSMARSGLMKTLSLLTAHLARGVERAKDRSLMGRGPAWL 127
The following BLAST results are available for this feature:
BLAST of EWM23269.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104266|gb|EWM23269.1|5.351e-87100.00hypothetical protein Naga_100829g3 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7424rna7424Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications