EWM23270.1, cds7403 (CDS) Nannochloropsis gaditana

Overview
NameEWM23270.1
Unique Namecds7403
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:551252..551343 +
Alignment locationCM002471.1:551397..551417 +
Alignment locationCM002471.1:551568..551811 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23270.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102672g1.2316.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:551252..551343 +
CM002471.1supercontigCM002471.1:551397..551417 +
CM002471.1supercontigCM002471.1:551568..551811 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23270.1 vs. NCBI_GenBank
Match: gi|585104268|gb|EWM23270.1| (hypothetical protein Naga_102672g1 [Nannochloropsis gaditana])

HSP 1 Score: 224.942 bits (572), Expect = 2.960e-74
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0 
Query:    1 MTLTGLFSLPPSFPPSLPPFLSPQHIAHLPPQVSHARGLRGRGRHRVMGEHQGGSEHQHLQIALARHSLLPLFPPPYGPGRAAPPLLPPNSPRLGAQHLPLDVCLRSFLHLFDQRAGF 118
            MTLTGLFSLPPSFPPSLPPFLSPQHIAHLPPQVSHARGLRGRGRHRVMGEHQGGSEHQHLQIALARHSLLPLFPPPYGPGRAAPPLLPPNSPRLGAQHLPLDVCLRSFLHLFDQRAGF
Sbjct:    1 MTLTGLFSLPPSFPPSLPPFLSPQHIAHLPPQVSHARGLRGRGRHRVMGEHQGGSEHQHLQIALARHSLLPLFPPPYGPGRAAPPLLPPNSPRLGAQHLPLDVCLRSFLHLFDQRAGF 118
The following BLAST results are available for this feature:
BLAST of EWM23270.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104268|gb|EWM23270.1|2.960e-74100.00hypothetical protein Naga_102672g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7420rna7420Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications