EWM23274.1, cds7400 (CDS) Nannochloropsis gaditana

Overview
NameEWM23274.1
Unique Namecds7400
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:547538..547879 +
Alignment locationCM002471.1:548037..548150 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23274.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101087g1.4494.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:547538..547879 +
CM002471.1supercontigCM002471.1:548037..548150 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM23274.1 vs. NCBI_GenBank
Match: gi|585104275|gb|EWM23274.1| (hypothetical protein Naga_101087g1 [Nannochloropsis gaditana])

HSP 1 Score: 300.827 bits (769), Expect = 2.703e-103
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0 
Query:    1 MCLELALSGRGILFLILFLPSVPSEMATEMARSPALHPPSPPPLPQQCRQQQQRQEPEYFRSRVSYGRMIRRTWQPAWQSAPNSWSRPCLLIASGFCTALGVGYQAVAIAGWLQYYLLLRFLDRGRRRLRLWVLAWLVHAAGWTLAMAVGR 151
            MCLELALSGRGILFLILFLPSVPSEMATEMARSPALHPPSPPPLPQQCRQQQQRQEPEYFRSRVSYGRMIRRTWQPAWQSAPNSWSRPCLLIASGFCTALGVGYQAVAIAGWLQYYLLLRFLDRGRRRLRLWVLAWLVHAAGWTLAMAVGR
Sbjct:    1 MCLELALSGRGILFLILFLPSVPSEMATEMARSPALHPPSPPPLPQQCRQQQQRQEPEYFRSRVSYGRMIRRTWQPAWQSAPNSWSRPCLLIASGFCTALGVGYQAVAIAGWLQYYLLLRFLDRGRRRLRLWVLAWLVHAAGWTLAMAVGR 151
The following BLAST results are available for this feature:
BLAST of EWM23274.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104275|gb|EWM23274.1|2.703e-103100.00hypothetical protein Naga_101087g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7417rna7417Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications