EWM23276.1, cds7397 (CDS) Nannochloropsis gaditana

Overview
NameEWM23276.1
Unique Namecds7397
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:543097..543154 -
Alignment locationCM002471.1:542716..542902 -
Alignment locationCM002471.1:542222..542558 -

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Properties
Property NameValue
Protein idEWM23276.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101027g2.10517.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:543097..543154 -
CM002471.1supercontigCM002471.1:542716..542902 -
CM002471.1supercontigCM002471.1:542222..542558 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23276.1 vs. NCBI_GenBank
Match: gi|585104278|gb|EWM23276.1| (hypothetical protein Naga_101027g2 [Nannochloropsis gaditana])

HSP 1 Score: 384.8 bits (987), Expect = 4.447e-135
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0 
Query:    1 MAVSRESSRGWDVWVPKRGARQGREGIGCGRLRFRGQDALMLGPASSGLAPVKDGQCGQCSSGRLKILHIRVCYAEASRDEGQKREGGARHGIWLRTEHAGASTTAHFPKRRACGSMAGLCDEQRWDVLAREKVKRLPSEDWIDWAHVEMERRGGGSGKEGGRRGRTSRRADRMMQAGTTRMQGLNRVRKHKL 193
            MAVSRESSRGWDVWVPKRGARQGREGIGCGRLRFRGQDALMLGPASSGLAPVKDGQCGQCSSGRLKILHIRVCYAEASRDEGQKREGGARHGIWLRTEHAGASTTAHFPKRRACGSMAGLCDEQRWDVLAREKVKRLPSEDWIDWAHVEMERRGGGSGKEGGRRGRTSRRADRMMQAGTTRMQGLNRVRKHKL
Sbjct:    1 MAVSRESSRGWDVWVPKRGARQGREGIGCGRLRFRGQDALMLGPASSGLAPVKDGQCGQCSSGRLKILHIRVCYAEASRDEGQKREGGARHGIWLRTEHAGASTTAHFPKRRACGSMAGLCDEQRWDVLAREKVKRLPSEDWIDWAHVEMERRGGGSGKEGGRRGRTSRRADRMMQAGTTRMQGLNRVRKHKL 193
The following BLAST results are available for this feature:
BLAST of EWM23276.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104278|gb|EWM23276.1|4.447e-135100.00hypothetical protein Naga_101027g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7414rna7414Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications