EWM23280.1, cds7395 (CDS) Nannochloropsis gaditana

Overview
NameEWM23280.1
Unique Namecds7395
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:532335..532994 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23280.1
Productfun14 family protein
Orig transcript idgnl|cribi|Naga_100181g3.3855.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:532335..532994 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR007014FUN14
Homology
BLAST of EWM23280.1 vs. NCBI_GenBank
Match: gi|585104284|gb|EWM23280.1| (fun14 family protein [Nannochloropsis gaditana])

HSP 1 Score: 448.743 bits (1153), Expect = 1.488e-159
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0
Query:    1 MLRPCSLSHPGPTSLVQNHLLPQTCSRPTRLTLTSTKRVLTLRRGSRFLAFLSFVASTTQDLRRLSSSSYCSPASRRRPLPSFPSTHLRKEEYNTRRKDSGDGDDFIPKALGSIGGEITFNGALGFGAGYTLKKIGKMAAIFLGVAFIASQSLGRMGYVEVNWKKIEGEVLKFLDLDGDDKLTVKDVALYWDKMKRVLMHNLPSTATFTAMFVLGLQKG 219
            MLRPCSLSHPGPTSLVQNHLLPQTCSRPTRLTLTSTKRVLTLRRGSRFLAFLSFVASTTQDLRRLSSSSYCSPASRRRPLPSFPSTHLRKEEYNTRRKDSGDGDDFIPKALGSIGGEITFNGALGFGAGYTLKKIGKMAAIFLGVAFIASQSLGRMGYVEVNWKKIEGEVLKFLDLDGDDKLTVKDVALYWDKMKRVLMHNLPSTATFTAMFVLGLQKG
Sbjct:    1 MLRPCSLSHPGPTSLVQNHLLPQTCSRPTRLTLTSTKRVLTLRRGSRFLAFLSFVASTTQDLRRLSSSSYCSPASRRRPLPSFPSTHLRKEEYNTRRKDSGDGDDFIPKALGSIGGEITFNGALGFGAGYTLKKIGKMAAIFLGVAFIASQSLGRMGYVEVNWKKIEGEVLKFLDLDGDDKLTVKDVALYWDKMKRVLMHNLPSTATFTAMFVLGLQKG 219          
BLAST of EWM23280.1 vs. NCBI_GenBank
Match: gi|698777518|ref|XP_009821803.1| (hypothetical protein H257_00695 [Aphanomyces astaci] >gi|574123928|gb|ETV89403.1| hypothetical protein H257_00695 [Aphanomyces astaci])

HSP 1 Score: 102.449 bits (254), Expect = 1.637e-23
Identity = 47/111 (42.34%), Postives = 72/111 (64.86%), Query Frame = 0
Query:  106 FIPKALGSIGGEITFNGALGFGAGYTLKKIGKMAAIFLGVAFIASQSLGRMGYVEVNWKKIEGEVLKFLDLDGDDKLTVKDVALYWDKMKRVLMHNLPSTATFTAMFVLGL 216
             I +  GS+G +++F GA+GF AG  +K IGK+AA+ +GV FI +Q     GY++++WKK+E + +  +D +GD K+T  D  ++W K   +  HNLPS+  F A F LGL
Sbjct:   93 LIDQYAGSVG-QVSFGGAVGFCAGMAVKSIGKVAAVAIGVVFIGAQMAASAGYIQIDWKKVEKDAIAAVDPNGDGKITPDDFKIWWKKFLALSKHNLPSSGGFAAGFFLGL 202          
BLAST of EWM23280.1 vs. NCBI_GenBank
Match: gi|673016838|ref|XP_008862380.1| (hypothetical protein H310_01127 [Aphanomyces invadans] >gi|574481583|gb|ETW08575.1| hypothetical protein H310_01127 [Aphanomyces invadans])

HSP 1 Score: 100.908 bits (250), Expect = 8.188e-23
Identity = 49/121 (40.50%), Postives = 76/121 (62.81%), Query Frame = 0
Query:  100 SGDGDD----FIPKALGSIGGEITFNGALGFGAGYTLKKIGKMAAIFLGVAFIASQSLGRMGYVEVNWKKIEGEVLKFLDLDGDDKLTVKDVALYWDKMKRVLMHNLPSTATFTAMFVLGL 216
            +G  DD     I +  GSIG +++F GA+GF AG  +K IGK+AA+ +GV F+ +Q     GY++++WKK+E + +  +D +GD K+T  D  ++W K   +  HNLPS+  F A F LG+
Sbjct:   81 NGKKDDPVSRLIDQYGGSIG-QVSFGGAVGFCAGMAVKSIGKIAAVAIGVVFVGAQMAESAGYIQIDWKKVEKDAIAAVDPNGDGKITPDDFKIWWKKFLALSKHNLPSSGGFAAGFALGI 200          
BLAST of EWM23280.1 vs. NCBI_GenBank
Match: gi|695402408|ref|XP_009523020.1| (hypothetical protein PHYSODRAFT_558741 [Phytophthora sojae] >gi|348680487|gb|EGZ20303.1| hypothetical protein PHYSODRAFT_558741 [Phytophthora sojae])

HSP 1 Score: 97.8265 bits (242), Expect = 1.278e-21
Identity = 45/123 (36.59%), Postives = 80/123 (65.04%), Query Frame = 0
Query:   94 NTRRKDSGDGDDFIPKALGSIGGEITFNGALGFGAGYTLKKIGKMAAIFLGVAFIASQSLGRMGYVEVNWKKIEGEVLKFLDLDGDDKLTVKDVALYWDKMKRVLMHNLPSTATFTAMFVLGL 216
            +  +K S   +  I   LG+ G E+T  G LGF +GY LK++GK AA+ +G+ FI +Q+    GY+++ W K++ +++  +D +GD K+  +DV L++ K+ +++  NLPS+A F++ F LG+
Sbjct:   92 DPNKKKSDPVEQIIDVVLGNCG-ELTLAGGLGFCSGYALKQVGKAAALAVGIVFIMAQTAAYNGYIDIKWGKVQKDMIAKVDPNGDGKIDSEDVKLWYRKLLKIMKTNLPSSAGFSSGFALGI 213          
BLAST of EWM23280.1 vs. NCBI_GenBank
Match: gi|1173951104|gb|OQR99017.1| (hypothetical protein ACHHYP_07365 [Achlya hypogyna])

HSP 1 Score: 96.2857 bits (238), Expect = 3.040e-21
Identity = 43/119 (36.13%), Postives = 70/119 (58.82%), Query Frame = 0
Query:  101 GDGDDFIPKALGSIG---GEITFNGALGFGAGYTLKKIGKMAAIFLGVAFIASQSLGRMGYVEVNWKKIEGEVLKFLDLDGDDKLTVKDVALYWDKMKRVLMHNLPSTATFTAMFVLGL 216
            G  DD + + +   G   GEI+F G LGF +G  +K++GK AA+ +G+ F+ +Q     GY+ +NW K+E + +  +D DGD K+T KD  ++W +      +N PS++ F A F  G+
Sbjct:   77 GKDDDAVSRIIDQFGSKIGEISFGGFLGFCSGAAVKQVGKAAAVSIGIIFVMAQLAASKGYININWSKVEKDAIAAVDPDGDGKITQKDFKIWWKRFLEFAQYNFPSSSGFAAGFAAGI 195          
BLAST of EWM23280.1 vs. NCBI_GenBank
Match: gi|922867550|gb|KOO34162.1| (fun14 family protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 95.9005 bits (237), Expect = 5.892e-21
Identity = 46/112 (41.07%), Postives = 68/112 (60.71%), Query Frame = 0
Query:  105 DFIPKALGSIGGEITFNGALGFGAGYTLKKIGKMAAIFLGVAFIASQSLGRMGYVEVNWKKIEGEVLKFLDLDGDDKLTVKDVALYWDKMKRVLMHNLPSTATFTAMFVLGL 216
            DF+   L   G +  F   LG  AGY L+ +GK AA  +G +FI  Q+L  +GYV+V+W+K+E +    LD DGD K+T  D+AL W +++ VL+ N P+   FTA  + G+
Sbjct:   25 DFVSTDLVPAGSQALFGSGLGTAAGYALRVVGKAAAFTIGASFIGLQTLSYLGYVQVDWRKVERDTTAKLDRDGDGKVTANDLALVWREVESVLIFNCPAGTGFTAGLLYGI 136          
BLAST of EWM23280.1 vs. NCBI_GenBank
Match: gi|970634272|gb|KUF79573.1| (FUN14 domain-containing protein 1 [Phytophthora nicotianae])

HSP 1 Score: 94.3597 bits (233), Expect = 1.718e-20
Identity = 38/101 (37.62%), Postives = 71/101 (70.30%), Query Frame = 0
Query:  116 GEITFNGALGFGAGYTLKKIGKMAAIFLGVAFIASQSLGRMGYVEVNWKKIEGEVLKFLDLDGDDKLTVKDVALYWDKMKRVLMHNLPSTATFTAMFVLGL 216
            GE+T  G LGF +GY LK++G+ AA+ +G+ F+ +Q+    GY+++ W K++ +++  +D +GD K+  +DV L++ K+ +++  NLPS+A F++ F LG+
Sbjct:   87 GELTLAGGLGFCSGYALKQVGRAAAVAVGIVFVMAQAAAYNGYIDIKWGKVQKDMIAKVDPNGDGKIDSEDVKLWYRKLLKIMKTNLPSSAGFSSGFALGV 187          
BLAST of EWM23280.1 vs. NCBI_GenBank
Match: gi|675187883|ref|XP_008902826.1| (hypothetical protein PPTG_09568 [Phytophthora parasitica INRA-310] >gi|566028285|gb|ETI51196.1| hypothetical protein F443_05396 [Phytophthora parasitica P1569] >gi|568023596|gb|ETL97651.1| hypothetical protein L917_05093 [Phytophthora parasitica] >gi|568054002|gb|ETM50808.1| hypothetical protein L914_05209 [Phytophthora parasitica] >gi|568097159|gb|ETN11903.1| hypothetical protein PPTG_09568 [Phytophthora parasitica INRA-310] >gi|570331990|gb|ETO79938.1| hypothetical protein F444_05441 [Phytophthora parasitica P1976] >gi|570955886|gb|ETP20959.1| hypothetical protein F441_05403 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 94.7449 bits (234), Expect = 1.824e-20
Identity = 38/101 (37.62%), Postives = 71/101 (70.30%), Query Frame = 0
Query:  116 GEITFNGALGFGAGYTLKKIGKMAAIFLGVAFIASQSLGRMGYVEVNWKKIEGEVLKFLDLDGDDKLTVKDVALYWDKMKRVLMHNLPSTATFTAMFVLGL 216
            GE+T  G LGF +GY LK++G+ AA+ +G+ F+ +Q+    GY+++ W K++ +++  +D +GD K+  +DV L++ K+ +++  NLPS+A F++ F LG+
Sbjct:  110 GELTLAGGLGFCSGYALKQVGRAAAVAVGIVFVMAQAAAYNGYIDIKWGKVQKDMIAKVDPNGDGKIDSEDVKLWYRKLLKIMKTNLPSSAGFSSGFALGV 210          
BLAST of EWM23280.1 vs. NCBI_GenBank
Match: gi|567965643|gb|ETK91113.1| (hypothetical protein L915_05253 [Phytophthora parasitica] >gi|567994327|gb|ETL44486.1| hypothetical protein L916_05208 [Phytophthora parasitica] >gi|570991062|gb|ETP48913.1| hypothetical protein F442_05446 [Phytophthora parasitica P10297])

HSP 1 Score: 94.7449 bits (234), Expect = 1.844e-20
Identity = 38/101 (37.62%), Postives = 71/101 (70.30%), Query Frame = 0
Query:  116 GEITFNGALGFGAGYTLKKIGKMAAIFLGVAFIASQSLGRMGYVEVNWKKIEGEVLKFLDLDGDDKLTVKDVALYWDKMKRVLMHNLPSTATFTAMFVLGL 216
            GE+T  G LGF +GY LK++G+ AA+ +G+ F+ +Q+    GY+++ W K++ +++  +D +GD K+  +DV L++ K+ +++  NLPS+A F++ F LG+
Sbjct:  110 GELTLAGGLGFCSGYALKQVGRAAAVAVGIVFVMAQAAAYNGYIDIKWGKVQKDMIAKVDPNGDGKIDSEDVKLWYRKLLKIMKTNLPSSAGFSSGFALGV 210          
BLAST of EWM23280.1 vs. NCBI_GenBank
Match: gi|325189541|emb|CCA24028.1| (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 93.9745 bits (232), Expect = 4.115e-20
Identity = 47/151 (31.13%), Postives = 83/151 (54.97%), Query Frame = 0
Query:   80 LPSFPSTHLRKEEYNTRRKDSGDGDD-------------FIPKALGSIGGEITFNGALGFGAGYTLKKIGKMAAIFLGVAFIASQSLGRMGYVEVNWKKIEGEVLKFLDLDGDDK-LTVKDVALYWDKMKRVLMHNLPSTATFTAMFVLGL 216
            L SF +    +E  +  +K+S D D+             F+ +  G  G EI+F G LGF +GY +  +GK+AA+ +G  F+ +Q     GY+ +NWKK+E +++K +D + +    T +D  + W +  +++  NLPS++ F A F+ G+
Sbjct:   63 LHSFIAAECERESQDDAKKESDDEDEPRSDRIVEDMVSKFVERMAGHFG-EISFGGVLGFCSGYAVGHVGKLAAMSIGGGFLVAQIAHSQGYISINWKKLERDIVKVIDPNRNSTGFTARDCHILWKRFLQIMEKNLPSSSGFVAGFLYGV 212          
The following BLAST results are available for this feature:
BLAST of EWM23280.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104284|gb|EWM23280.1|1.488e-159100.00fun14 family protein [Nannochloropsis gaditana][more]
gi|698777518|ref|XP_009821803.1|1.637e-2342.34hypothetical protein H257_00695 [Aphanomyces astac... [more]
gi|673016838|ref|XP_008862380.1|8.188e-2340.50hypothetical protein H310_01127 [Aphanomyces invad... [more]
gi|695402408|ref|XP_009523020.1|1.278e-2136.59hypothetical protein PHYSODRAFT_558741 [Phytophtho... [more]
gi|1173951104|gb|OQR99017.1|3.040e-2136.13hypothetical protein ACHHYP_07365 [Achlya hypogyna... [more]
gi|922867550|gb|KOO34162.1|5.892e-2141.07fun14 family protein [Chrysochromulina sp. CCMP291... [more]
gi|970634272|gb|KUF79573.1|1.718e-2037.62FUN14 domain-containing protein 1 [Phytophthora ni... [more]
gi|675187883|ref|XP_008902826.1|1.824e-2037.62hypothetical protein PPTG_09568 [Phytophthora para... [more]
gi|567965643|gb|ETK91113.1|1.844e-2037.62hypothetical protein L915_05253 [Phytophthora para... [more]
gi|325189541|emb|CCA24028.1|4.115e-2031.13conserved hypothetical protein [Albugo laibachii N... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7412rna7412Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications