EWM23281.1, cds7393 (CDS) Nannochloropsis gaditana

Overview
NameEWM23281.1
Unique Namecds7393
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:515985..516341 +
Alignment locationCM002471.1:516493..516609 +
Alignment locationCM002471.1:516842..516943 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23281.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100181g5.3856.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:515985..516341 +
CM002471.1supercontigCM002471.1:516493..516609 +
CM002471.1supercontigCM002471.1:516842..516943 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
Homology
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BLAST of EWM23281.1 vs. NCBI_GenBank
Match: gi|585104285|gb|EWM23281.1| (hypothetical protein Naga_100181g5 [Nannochloropsis gaditana])

HSP 1 Score: 389.808 bits (1000), Expect = 3.407e-137
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0 
Query:    1 MPKTNVASKRRARARASNEPYAKFPNACSTQVVLPDPKRPELAGTGLQKPSRHHKMLRRMAFLKSIEENAAAASVEMAAGIEKADRRKKTTGHGDEAMQRGLNGTEMRVNSPFLGQENKAATGSPGATFAMTSTKRHEQRVSNTIKTNAARQRVAAEEIERLKMVTSHPAFKAGPHAAIRDHLRTRIAEGK 191
            MPKTNVASKRRARARASNEPYAKFPNACSTQVVLPDPKRPELAGTGLQKPSRHHKMLRRMAFLKSIEENAAAASVEMAAGIEKADRRKKTTGHGDEAMQRGLNGTEMRVNSPFLGQENKAATGSPGATFAMTSTKRHEQRVSNTIKTNAARQRVAAEEIERLKMVTSHPAFKAGPHAAIRDHLRTRIAEGK
Sbjct:    1 MPKTNVASKRRARARASNEPYAKFPNACSTQVVLPDPKRPELAGTGLQKPSRHHKMLRRMAFLKSIEENAAAASVEMAAGIEKADRRKKTTGHGDEAMQRGLNGTEMRVNSPFLGQENKAATGSPGATFAMTSTKRHEQRVSNTIKTNAARQRVAAEEIERLKMVTSHPAFKAGPHAAIRDHLRTRIAEGK 191
The following BLAST results are available for this feature:
BLAST of EWM23281.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104285|gb|EWM23281.1|3.407e-137100.00hypothetical protein Naga_100181g5 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7410rna7410Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications