EWM23298.1, cds7383 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23298.1 vs. NCBI_GenBank
Match: gi|585104303|gb|EWM23298.1| (Protein of unknown function DUF3054 [Nannochloropsis gaditana]) HSP 1 Score: 632.869 bits (1631), Expect = 0.000e+0 Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0 Query: 1 MGREKQHNPIPLLFLLLVATSFPAVFAFVVPSIPSGRDSYILRTPMFVASKLPSSSASGSRQAAFGALLARKQRTLAEELDDLRLDESTMSAEEKKRLQGLRASYKLEDVLDFDGTNAEPLPSAPASPAQADPDYDPLDDAEDLAVAETAWSGQAGLDVRRVGENNWKDVGARPLLALGDVLMFLLFASVGRSIHTGGLSLDVQVVQTAAPFILAWLGLAPLLGAYTPEASRSTGNAVKTVLKAWALAVPGGLVGRGLLKGEVPPVPFMAVTMVTTLVLLTAWRVAVVAVAGGEVEGGEGNKRSGLFDVFKMVTTLIGRW 320 MGREKQHNPIPLLFLLLVATSFPAVFAFVVPSIPSGRDSYILRTPMFVASKLPSSSASGSRQAAFGALLARKQRTLAEELDDLRLDESTMSAEEKKRLQGLRASYKLEDVLDFDGTNAEPLPSAPASPAQADPDYDPLDDAEDLAVAETAWSGQAGLDVRRVGENNWKDVGARPLLALGDVLMFLLFASVGRSIHTGGLSLDVQVVQTAAPFILAWLGLAPLLGAYTPEASRSTGNAVKTVLKAWALAVPGGLVGRGLLKGEVPPVPFMAVTMVTTLVLLTAWRVAVVAVAGGEVEGGEGNKRSGLFDVFKMVTTLIGRW Sbjct: 1 MGREKQHNPIPLLFLLLVATSFPAVFAFVVPSIPSGRDSYILRTPMFVASKLPSSSASGSRQAAFGALLARKQRTLAEELDDLRLDESTMSAEEKKRLQGLRASYKLEDVLDFDGTNAEPLPSAPASPAQADPDYDPLDDAEDLAVAETAWSGQAGLDVRRVGENNWKDVGARPLLALGDVLMFLLFASVGRSIHTGGLSLDVQVVQTAAPFILAWLGLAPLLGAYTPEASRSTGNAVKTVLKAWALAVPGGLVGRGLLKGEVPPVPFMAVTMVTTLVLLTAWRVAVVAVAGGEVEGGEGNKRSGLFDVFKMVTTLIGRW 320
BLAST of EWM23298.1 vs. NCBI_GenBank
Match: gi|553188978|ref|XP_005854905.1| (hypothetical protein NGA_0392200, partial [Nannochloropsis gaditana CCMP526] >gi|422294149|gb|EKU21449.1| hypothetical protein NGA_0392200, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 543.117 bits (1398), Expect = 0.000e+0 Identity = 274/277 (98.92%), Postives = 274/277 (98.92%), Query Frame = 0 Query: 1 MGREKQHNPIPLLFLLLVATSFPAVFAFVVPSIPSGRDSYILRTPMFVASKLPSSSASGSRQAAFGALLARKQRTLAEELDDLRLDESTMSAEEKKRLQGLRASYKLEDVLDFDGTNAEPLPSAPASPAQADPDYDPLDDAEDLAVAETAWSGQAGLDVRRVGENNWKDVGARPLLALGDVLMFLLFASVGRSIHTGGLSLDVQVVQTAAPFILAWLGLAPLLGAYTPEASRSTGNAVKTVLKAWALAVPGGLVGRGLLKGEVPPVPFMAVTMVTTL 277 MGREKQHNPIPLLFLLL ATSFPAVFAFV PSIPSGRD YILRTPMFVASKLPSSSASGSRQAAFGALLARKQRTLAEELDDLRLDESTMSAEEKKRLQGLRASYKLEDVLDFDGTNAEPLPSAPASPAQADPDYDPLDDAEDLAVAETAWSGQAGLDVRRVGENNWKDVGARPLLALGDVLMFLLFASVGRSIHTGGLSLDVQVVQTAAPFILAWLGLAPLLGAYTPEASRSTGNAVKTVLKAWALAVPGGLVGRGLLKGEVPPVPFMAVTMVTTL Sbjct: 1 MGREKQHNPIPLLFLLLAATSFPAVFAFVAPSIPSGRDFYILRTPMFVASKLPSSSASGSRQAAFGALLARKQRTLAEELDDLRLDESTMSAEEKKRLQGLRASYKLEDVLDFDGTNAEPLPSAPASPAQADPDYDPLDDAEDLAVAETAWSGQAGLDVRRVGENNWKDVGARPLLALGDVLMFLLFASVGRSIHTGGLSLDVQVVQTAAPFILAWLGLAPLLGAYTPEASRSTGNAVKTVLKAWALAVPGGLVGRGLLKGEVPPVPFMAVTMVTTL 277
BLAST of EWM23298.1 vs. NCBI_GenBank
Match: gi|299116121|emb|CBN76030.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 155.606 bits (392), Expect = 5.965e-41 Identity = 100/234 (42.74%), Postives = 136/234 (58.12%), Query Frame = 0 Query: 90 MSAEEKKRLQGLRASYKLEDVLDFDGTNAEPLPSAPASPAQADPDYDPLDDAEDLAVAETAWSGQAGLDVRRV--GENNWKDVGARPLLALGDVLMFLLFASVGRSIHTGGLSLDVQVVQTAAPFILAWLGLAPLLGAYTPEASRSTGNAVKTVLKAWALAVPGGLVGRGLLK-GEVPPVPFMAVTMVTTLVLLTAWRVAVVAVAGGEVEGGEGNKRSGLFDVFKMVTTLIGRW 320 M+AEE++R +GL + + L A Q D +D +DL V +TAW GQAGLDV G +W D+ AR LA+GD + +FA VGR+ H G S D+ V+ TA PF++ WL ++PLLGAYT A+ + G A K +L AW +++P G+ R L K GEVPPVPF +M+ TL L AWR AV GEG+K++GL D F+M+TTL+ RW Sbjct: 147 MTAEERQRAEGLASIER-------------SLAEVTAIQRQLGISVDEDEDEKDLEVTDTAWRGQAGLDVTDAADGSRDWSDLSARKGLAVGDAVALTMFAYVGRASH-GMASFDLGVLLTALPFLIGWLAVSPLLGAYTRSATETPGGAAKALLPAWGISIPVGIFLRALSKGGEVPPVPFAVTSMIFTLAALMAWRQLYTAVN----PTGEGDKQAGLLDGFRMITTLLQRW 362
BLAST of EWM23298.1 vs. NCBI_GenBank
Match: gi|546323141|ref|XP_005717989.1| (unnamed protein product [Chondrus crispus] >gi|507114576|emb|CDF38120.1| unnamed protein product [Chondrus crispus]) HSP 1 Score: 149.058 bits (375), Expect = 2.535e-37 Identity = 83/178 (46.63%), Postives = 110/178 (61.80%), Query Frame = 0 Query: 144 LAVAETAWSGQAGLDVR-RVGENNWKDVGARPLLALGDVLMFLLFASVGRSIHTGGLSLDVQVVQTAAPFILAWLGLAPLLGAYTPEASRSTGNAVKTVLKAWALAVPGGLVGRGLLKGEVPPVPFMAVTMVTTLVLLTAWRVAVVAVAGGEVEGGEGNKRSGLFDVFKMVTTLIGRW 320 L + WSGQAG+D G +N+ D+G R LALGD FLLFA +G++ H G SL+ VVQTA PFI+AWL +PLLGAYT A+ + VKT K+WA+AVP G+ RG+L VPP F VT+V+T ++ WRV + G E + +R G+ D F MV+TL+ RW Sbjct: 333 LTNEDVNWSGQAGVDTPGSSGTSNYSDLGKRLDLALGDTAAFLLFAYIGKASH-GDKSLNFGVVQTATPFIVAWLATSPLLGAYTRAATANVAATVKTFAKSWAIAVPMGIGLRGVLTDHVPPAVFAVVTLVSTFAIVGGWRVLYTKIRGDETDEA---RRGGILDGFNMVSTLLRRW 506
BLAST of EWM23298.1 vs. NCBI_GenBank
Match: gi|1189389735|gb|OSX76712.1| (hypothetical protein BU14_0178s0028 [Porphyra umbilicalis]) HSP 1 Score: 139.428 bits (350), Expect = 2.994e-34 Identity = 78/171 (45.61%), Postives = 106/171 (61.99%), Query Frame = 0 Query: 151 WSGQAGLDVRR-VGENNWKDVGARPLLALGDVLMFLLFASVGRSIHTGGLSLDVQVVQTAAPFILAWLGLAPLLGAYTPEASRSTGNAVKTVLKAWALAVPGGLVGRGLLKGEVPPVPFMAVTMVTTLVLLTAWRVAVVAVAGGEVEGGEGNKRSGLFDVFKMVTTLIGRW 320 WSGQAG+DV ++ D+ A PLLA GDV +FL FA++G + H + + V TAAPFI+AWL +APL+GAYT A + A T +AW + VP GL RG++ +PP F VT+++T VLL WR + V + G EV G KR G+ D F+M+TTL+ RW Sbjct: 272 WSGQAGVDVNTPAAPPSYADMAAHPLLAAGDVAVFLAFATIGAASHAANAN-PLSVTLTAAPFIVAWLAVAPLMGAYTRRAVGTYQGAAVTTARAWLVGVPSGLALRGVVTSHLPPPSFAVVTLLSTAVLLGVWRGSYVKLRGAEVAEG---KRGGVLDGFRMITTLLRRW 438
BLAST of EWM23298.1 vs. NCBI_GenBank
Match: gi|873232234|emb|CEM05849.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 131.339 bits (329), Expect = 1.817e-32 Identity = 78/188 (41.49%), Postives = 116/188 (61.70%), Query Frame = 0 Query: 135 YDPLDDAEDLAVAETAWSGQAGLDVRRVGENNWKDVGARPLLALGDVLMFLLFASVGRSIHTGGLS--LDVQVVQTAAPFILAWLGLAPLLGAYTPEASRSTGNAVKTVLKAWALAVPGGLVGRGLLKGEVPPVPFMAVTMVTTLVLLTAWRVAVVAVAGGEVEGGEGNKRSGLFDVFKMVTTLIGRW 320 +D +D+ + + T W+GQAGL+VRRVG++NW D+ R LLA GD + L FA GR+ H L V QTAAPF++AW G++PLLGAYT +A+ + + ++ AWA++ GL R + +GE PP F+ +++V T V+L++WR V + G E + GE KR + D K +T L+ RW Sbjct: 103 WDVVDERD---IERTQWTGQAGLEVRRVGKSNWMDIPDRWLLASGDAVALLAFALAGRANHGAQQETILSPGVWQTAAPFLIAWFGISPLLGAYTHDATANYKKMAQVLIPAWAVSASMGLALRAVYRGEQPPGVFVVISLVATAVVLSSWRAFYVLINGEETDDGE-MKRGNVLDGAKALTNLLRRW 286
BLAST of EWM23298.1 vs. NCBI_GenBank
Match: gi|971517808|dbj|GAQ80398.1| (hypothetical protein KFL_000530250 [Klebsormidium nitens]) HSP 1 Score: 114.005 bits (284), Expect = 9.242e-27 Identity = 75/192 (39.06%), Postives = 109/192 (56.77%), Query Frame = 0 Query: 130 QADPDYDPLDDAEDLAVAETAWSGQAGLDVRRVGENNWKDVGARPLLALGDVLMFLLFASVGRSIHTGGLSLDVQVVQTAAPFILAWLGLAPLLGAYTPEASRSTG-NAVKTVLKAWALAVPGGLVGRGLLKGEVPPVPFMAVTMVTTLVLLTAWRVAVVAVAGGEVEGGEGNKRSGLFDVFKMVTTLIGRW 320 +ADP+ ++ V E G A +D GE+N ++G LL GD + LLFA G+ H+G + D VV TAAPF++ W A LLG Y +A+ S AV T AWA+ +P G+V RG+LKG+VPP PF+ VT+ +T VLL WR A+ A G + GN+ F+ +++++L+ RW Sbjct: 32 EADPNLKTYAVEDENVVVE----GVAKIDR---GEDN-MNLGRLALLVAGDTVALLLFALAGKVSHSG--TADFGVVPTAAPFLVGWFASATLLGGYGADATLSGPLKAVTTTGIAWAVGIPLGIVIRGVLKGQVPPTPFILVTLASTFVLLVGWRAALAATGG---KRDVGNRSGSAFEFLELLSSLVRRW 210
BLAST of EWM23298.1 vs. NCBI_GenBank
Match: gi|514814254|ref|XP_004981899.1| (PREDICTED: uncharacterized protein LOC101786698 [Setaria italica]) HSP 1 Score: 108.612 bits (270), Expect = 3.585e-24 Identity = 64/149 (42.95%), Postives = 92/149 (61.74%), Query Frame = 0 Query: 175 LLALGDVLMFLLFASVGRSIHTGGLSLDVQVVQTAAPFILAWLGLAPLLGAYTPEAS--RSTGNAVKTVLKAWALAVPGGLVGRGLLKGEVPPVPFMAVTMVTTLVLLTAWRVAVVAV-AGGEVEGGEGNKRSGLFDVFKMVTTLIGRW 320 LLA GDVL LLF+++GR H G LD + +TA PFI WL A LLG + +A G+AV T K+WA+ +P GL R + G +PP PF+ VTM +T VLLTAWR V + + G+ + + +R F++F+++T+L+ RW Sbjct: 114 LLAGGDVLCLLLFSAIGRFSH-GLPVLDAETFKTADPFIAGWLLSAYLLGGFGEDAKGRNGVGSAVITAAKSWAVGIPLGLAIRAVTSGHIPPTPFILVTMGSTGVLLTAWRALVSQILSTGQKQQDDVYRRGSPFELFELLTSLVRRW 261
BLAST of EWM23298.1 vs. NCBI_GenBank
Match: gi|242033097|ref|XP_002463943.1| (uncharacterized protein LOC8059959 [Sorghum bicolor] >gi|241917797|gb|EER90941.1| hypothetical protein SORBI_3001G104800 [Sorghum bicolor]) HSP 1 Score: 107.457 bits (267), Expect = 9.189e-24 Identity = 79/206 (38.35%), Postives = 114/206 (55.34%), Query Frame = 0 Query: 120 PLPSAPASPAQADPDYDPL-DDAEDL-AVAETAWSGQAGLDVRRVGENNWKDVGARPLLALGDVLMFLLFASVGRSIHTGGLSLDVQVVQTAAPFILAWLGLAPLLGAYTPEAS--RSTGNAVKTVLKAWALAVPGGLVGRGLLKGEVPPVPFMAVTMVTTLVLLTAWRVAVVAVAGGEVEGGEGNKRSGL-FDVFKMVTTLIGRW 320 P S+PA+ A DP + DD L V + G AG++ + V ++ +G LLA GDV LLF+++GR H G LD + +TA PFI WL A LLG + +A GNAV K+WA+ +P GL R + G +PP PF+ VTM +T VLLTAWR V + + + + R G F++F+++T+L+ RW Sbjct: 68 PSGSSPAAAATEDPVLVRVADDGVPLEGVIQIEKPGDAGVESKLV---SYAKLG---LLAGGDVFCLLLFSAIGRFSH-GLPVLDAETFKTADPFIAGWLLSAYLLGGFGDDAKGRNGVGNAVIAAAKSWAVGIPLGLAIRAVTSGHIPPTPFILVTMGSTGVLLTAWRALVSQLLSNQQKQQDDVYRRGSPFELFELLTSLVRRW 266
BLAST of EWM23298.1 vs. NCBI_GenBank
Match: gi|1002247960|ref|XP_015628153.1| (PREDICTED: uncharacterized protein LOC4333986 [Oryza sativa Japonica Group] >gi|28273393|gb|AAO38479.1| unknown protein [Oryza sativa Japonica Group]) HSP 1 Score: 104.76 bits (260), Expect = 1.041e-22 Identity = 62/149 (41.61%), Postives = 89/149 (59.73%), Query Frame = 0 Query: 175 LLALGDVLMFLLFASVGRSIHTGGLSLDVQVVQTAAPFILAWLGLAPLLGAYTPEAS--RSTGNAVKTVLKAWALAVPGGLVGRGLLKGEVPPVPFMAVTMVTTLVLLTAWRVAV-VAVAGGEVEGGEGNKRSGLFDVFKMVTTLIGRW 320 LLA GDVL L+F+++GR H G LD + +TA PFI WL A LLG + +A GNAV K+WA+ +P GL R L G +PP PF+ V M +T VLLT WR V + + G+ + + +R F++F+++T+L+ RW Sbjct: 124 LLASGDVLCLLVFSAIGRFSH-GLPVLDAETFKTADPFIAGWLLSAYLLGGFGDDAKGRNGVGNAVVVAAKSWAVGIPLGLAIRALSSGHIPPTPFILVAMGSTWVLLTGWRALVSLLFSTGQSQQDDVYRRGSPFELFELLTSLVRRW 271 The following BLAST results are available for this feature:
BLAST of EWM23298.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|