EWM23287.1, cds7377 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23287.1 vs. NCBI_GenBank
Match: gi|585104292|gb|EWM23287.1| (40s ribosomal protein s7 [Nannochloropsis gaditana]) HSP 1 Score: 451.825 bits (1161), Expect = 8.963e-161 Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0 Query: 1 MGGVSVCLHLSFNAHNLPLSSNCIVMATKKIVKPRGQEPDEWDTKVASELMNLENNNPEWKADLKDLYITAAKEVDVGKTQAIVVFVPYRLLKAYHKIQQRLVRELEKKFSGSHVVVIAQRTILGKSYGRSTKTKGPRPRSRTLTAVQDAILEDLVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLDTFKEVYKKLTNKEVEFTFFVKQTEA 218 MGGVSVCLHLSFNAHNLPLSSNCIVMATKKIVKPRGQEPDEWDTKVASELMNLENNNPEWKADLKDLYITAAKEVDVGKTQAIVVFVPYRLLKAYHKIQQRLVRELEKKFSGSHVVVIAQRTILGKSYGRSTKTKGPRPRSRTLTAVQDAILEDLVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLDTFKEVYKKLTNKEVEFTFFVKQTEA Sbjct: 1 MGGVSVCLHLSFNAHNLPLSSNCIVMATKKIVKPRGQEPDEWDTKVASELMNLENNNPEWKADLKDLYITAAKEVDVGKTQAIVVFVPYRLLKAYHKIQQRLVRELEKKFSGSHVVVIAQRTILGKSYGRSTKTKGPRPRSRTLTAVQDAILEDLVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLDTFKEVYKKLTNKEVEFTFFVKQTEA 218
BLAST of EWM23287.1 vs. NCBI_GenBank
Match: gi|553188974|ref|XP_005854904.1| (small subunit ribosomal protein S7e [Nannochloropsis gaditana CCMP526] >gi|422294148|gb|EKU21448.1| small subunit ribosomal protein S7e [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 395.586 bits (1015), Expect = 5.415e-139 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0 Query: 26 MATKKIVKPRGQEPDEWDTKVASELMNLENNNPEWKADLKDLYITAAKEVDVGKTQAIVVFVPYRLLKAYHKIQQRLVRELEKKFSGSHVVVIAQRTILGKSYGRSTKTKGPRPRSRTLTAVQDAILEDLVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLDTFKEVYKKLTNKEVEFTFFVKQTEA 218 MATKKIVKPRGQEPDEWDTKVASELMNLENNNPEWKADLKDLYITAAKEVDVGKTQAIVVFVPYRLLKAYHKIQQRLVRELEKKFSGSHVVVIAQRTILGKSYGRSTKTKGPRPRSRTLTAVQDAILEDLVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLDTFKEVYKKLTNKEVEFTFFVKQTEA Sbjct: 1 MATKKIVKPRGQEPDEWDTKVASELMNLENNNPEWKADLKDLYITAAKEVDVGKTQAIVVFVPYRLLKAYHKIQQRLVRELEKKFSGSHVVVIAQRTILGKSYGRSTKTKGPRPRSRTLTAVQDAILEDLVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLDTFKEVYKKLTNKEVEFTFFVKQTEA 193
BLAST of EWM23287.1 vs. NCBI_GenBank
Match: gi|553183926|ref|XP_005853994.1| (small subunit ribosomal protein S7e [Nannochloropsis gaditana CCMP526] >gi|422295064|gb|EKU22363.1| small subunit ribosomal protein S7e [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 335.88 bits (860), Expect = 1.215e-115 Identity = 164/165 (99.39%), Postives = 165/165 (100.00%), Query Frame = 0 Query: 54 ENNNPEWKADLKDLYITAAKEVDVGKTQAIVVFVPYRLLKAYHKIQQRLVRELEKKFSGSHVVVIAQRTILGKSYGRSTKTKGPRPRSRTLTAVQDAILEDLVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLDTFKEVYKKLTNKEVEFTFFVKQTEA 218 +NNNPEWKADLKDLYITAAKEVDVGKTQAIVVFVPYRLLKAYHKIQQRLVRELEKKFSGSHVVVIAQRTILGKSYGRSTKTKGPRPRSRTLTAVQDAILEDLVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLDTFKEVYKKLTNKEVEFTFFVKQTEA Sbjct: 7 KNNNPEWKADLKDLYITAAKEVDVGKTQAIVVFVPYRLLKAYHKIQQRLVRELEKKFSGSHVVVIAQRTILGKSYGRSTKTKGPRPRSRTLTAVQDAILEDLVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLDTFKEVYKKLTNKEVEFTFFVKQTEA 171
BLAST of EWM23287.1 vs. NCBI_GenBank
Match: gi|669165028|ref|XP_008618076.1| (40S ribosomal protein S7 [Saprolegnia diclina VS20] >gi|813189935|ref|XP_012207567.1| 40S ribosomal protein S7 [Saprolegnia parasitica CBS 223.65] >gi|530730186|gb|EQC28428.1| 40S ribosomal protein S7 [Saprolegnia diclina VS20] >gi|641527480|gb|KDO21767.1| 40S ribosomal protein S7 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 275.789 bits (704), Expect = 1.469e-91 Identity = 137/191 (71.73%), Postives = 161/191 (84.29%), Query Frame = 0 Query: 26 MATKKIVKPRGQEPDEWDTKVASELMNLENNNPEWKADLKDLYITAAKEVDV-GKTQAIVVFVPYRLLKAYHKIQQRLVRELEKKFSGSHVVVIAQRTILGKSYGRSTKTKGPRPRSRTLTAVQDAILEDLVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLDTFKEVYKKLTNKEVEFTFFVKQ 215 M++ KIVKP GQ D+++ +VA EL LEN++ + KADLKDLYITAAK+VDV G +AIV+FVP+RLLK+++KIQ RLVRELEKKFSG HVV+IAQRTILGK + RS T PR RSRTLT+VQDAIL+DLVYPTEIVGKRTRCK+DGTK LKVFLD KDQ+NV+ KLDTF VYKKLTNKEV F F V+Q Sbjct: 1 MSSAKIVKPAGQVADDFEKQVAHELAALENSSADIKADLKDLYITAAKQVDVVGGRKAIVIFVPFRLLKSFNKIQARLVRELEKKFSGRHVVIIAQRTILGKGHSRSAHTSAPRARSRTLTSVQDAILDDLVYPTEIVGKRTRCKLDGTKLLKVFLDPKDQVNVETKLDTFATVYKKLTNKEVVFEFPVQQ 191
BLAST of EWM23287.1 vs. NCBI_GenBank
Match: gi|676380333|ref|XP_009033445.1| (hypothetical protein AURANDRAFT_70049 [Aureococcus anophagefferens] >gi|323456545|gb|EGB12412.1| hypothetical protein AURANDRAFT_70049 [Aureococcus anophagefferens]) HSP 1 Score: 280.026 bits (715), Expect = 2.911e-91 Identity = 137/195 (70.26%), Postives = 165/195 (84.62%), Query Frame = 0 Query: 20 SSNCIVMATKKIVKPRGQEPDEWDTKVASELMNLENNNPEWKADLKDLYITAAKEVDVGKTQ-AIVVFVPYRLLKAYHKIQQRLVRELEKKFSGSHVVVIAQRTILGKSYGRSTKTKGPRPRSRTLTAVQDAILEDLVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLDTFKEVYKKLTNKEVEFTFFV 213 SS + MA+KK VKP GQEPDE +++VA+EL NLE ++ E KA+LK+LY +AKEV+VG + AI+VFVP+ LLK+YHKIQ RLVRELEKKFSG HV+++AQRTILGK+Y RS+ +KGPRPRSRTLT+VQD IL+DLVYPTEIVGKRTRCK+DG+K LKV LD KDQ+NV+ KLDTF VYKKLTNKEV F F V Sbjct: 135 SSAQVKMASKKCVKPEGQEPDEIESQVAAELYNLEQSSTELKAELKELYFLSAKEVEVGGGKKAIIVFVPFGLLKSYHKIQTRLVRELEKKFSGRHVIIVAQRTILGKNYARSSSSKGPRPRSRTLTSVQDCILDDLVYPTEIVGKRTRCKLDGSKVLKVLLDPKDQVNVETKLDTFSFVYKKLTNKEVIFEFPV 329
BLAST of EWM23287.1 vs. NCBI_GenBank
Match: gi|1173929235|gb|OQR82502.1| (40S ribosomal protein S7 [Achlya hypogyna]) HSP 1 Score: 268.085 bits (684), Expect = 2.180e-88 Identity = 137/202 (67.82%), Postives = 161/202 (79.70%), Query Frame = 0 Query: 26 MATKKIVKPRGQEPDEWDTKVASELMNLENNNPEWKADLKDLYITAAKEVDV-GKTQAIVVFVPYRLLKAYHKIQQRLVRELEKKFSGSHVVVIAQRTILGKSYGRSTKTKGPRPRSRTLTAVQDAILE-----------DLVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLDTFKEVYKKLTNKEVEFTFFVKQ 215 M++ KIVKP GQ D+++ +VA EL LEN++ E KADLKDLYITAAK+VDV G +AIV+FVP+RLLK+++KIQ RLVRELEKKFSG HVV+IAQRTILGK + RS T PR RSRTLTAVQDAIL+ DLVYPTEIVGKRTRCK+DG+K LKV+LD KDQ+NV+ KLDTF VYKKLTNKEV F F V+Q Sbjct: 1 MSSAKIVKPAGQVADDFEKQVAQELAALENSSAEIKADLKDLYITAAKQVDVVGGRKAIVIFVPFRLLKSFNKIQARLVRELEKKFSGRHVVIIAQRTILGKGHSRSAHTSAPRARSRTLTAVQDAILDVRIFLARGISMDLVYPTEIVGKRTRCKLDGSKLLKVYLDPKDQVNVETKLDTFATVYKKLTNKEVVFEFPVQQ 202
BLAST of EWM23287.1 vs. NCBI_GenBank
Match: gi|635362833|emb|CCI10376.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 267.314 bits (682), Expect = 3.269e-88 Identity = 135/189 (71.43%), Postives = 156/189 (82.54%), Query Frame = 0 Query: 28 TKKIVKPRGQEPDEWDTKVASELMNLENNNPEWKADLKDLYITAAKEVDVGK-TQAIVVFVPYRLLKAYHKIQQRLVRELEKKFSGSHVVVIAQRTILGKSYGRSTKTKGPRPRSRTLTAVQDAILEDLVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLDTFKEVYKKLTNKEVEFTFFVKQ 215 T KIVKP GQ PDE++ +VA EL NLE + E K +L+DLYITAAK+VDV +AIV+FVPYRL+KA+ KIQ RL RELEKKFSG HVV IAQRTILGKSY RS K KGPRPRSRTL AVQ++ILEDLV+PTEIVGKRTRC +DGTK+LKV LD KDQ+NV+ KLDTF VYKKLTNK+V F F ++Q Sbjct: 4 TSKIVKPEGQFPDEFEQQVAQELQNLEGSAGELKNELQDLYITAAKQVDVASGRKAIVLFVPYRLMKAFRKIQIRLTRELEKKFSGRHVVFIAQRTILGKSYARSKKVKGPRPRSRTLKAVQESILEDLVFPTEIVGKRTRCLLDGTKSLKVHLDPKDQVNVETKLDTFATVYKKLTNKDVVFEFPMQQ 192
BLAST of EWM23287.1 vs. NCBI_GenBank
Match: gi|298713550|emb|CBJ27078.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 283.108 bits (723), Expect = 4.366e-88 Identity = 143/214 (66.82%), Postives = 169/214 (78.97%), Query Frame = 0 Query: 7 CLHLSFNAHNLPLSSN----CIVMATKKIVKPRGQEPDEWDTKVASELMNLENNNPEWKADLKDLYITAAKEVDVGKTQ-AIVVFVPYRLLKAYHKIQQRLVRELEKKFSGSHVVVIAQRTILGKSYGRSTKTKGPRPRSRTLTAVQDAILEDLVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLDTFKEVYKKLTNKEVEFTFFVKQ 215 C SF AH L LS + KIVKP GQE DE++ +VA EL NLE + + KAD++DLYIT AK+VDVG + AI++FVPYRLL++YHKIQ RLVRELEKKFSG HVV+IA RTILGKSY RSTKT+G RPRSRTLTAVQDA+LEDLV+PTEIVGKRTRCK+DG+K LKV LD KDQ+NV+ KLDTF VYKK+TNK+V F F V++ Sbjct: 498 CWWPSFGAHTLELSGAGALVTMFTGATKIVKPEGQEADEFEQQVAQELFNLEMSAADIKADIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQE 711
BLAST of EWM23287.1 vs. NCBI_GenBank
Match: gi|325189119|emb|CCA23645.1| (40S ribosomal protein S7 putative [Albugo laibachii Nc14]) HSP 1 Score: 263.848 bits (673), Expect = 7.644e-87 Identity = 134/189 (70.90%), Postives = 153/189 (80.95%), Query Frame = 0 Query: 28 TKKIVKPRGQEPDEWDTKVASELMNLENNNPEWKADLKDLYITAAKEVDVGK-TQAIVVFVPYRLLKAYHKIQQRLVRELEKKFSGSHVVVIAQRTILGKSYGRSTKTKGPRPRSRTLTAVQDAILEDLVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLDTFKEVYKKLTNKEVEFTFFVKQ 215 T KIVKP GQ PDE++ +VA EL NLE + E K +LKDLYITAAK+VDV +AIV+FVPYRL+KA+ KIQ RL RELEKKFSG HVV IAQRTILG SY RS K KGPRPRSRTL VQ++ILEDLV+PT+IVGKRTRC +DGTK LKV LD KDQ+NV+ KLDTF VYKKLTNK+V F F V+Q Sbjct: 4 TSKIVKPEGQIPDEFEQQVAQELQNLEGSAGELKNELKDLYITAAKQVDVASGRKAIVMFVPYRLMKAFRKIQIRLTRELEKKFSGRHVVFIAQRTILGMSYARSRKVKGPRPRSRTLKTVQESILEDLVFPTDIVGKRTRCLLDGTKALKVHLDPKDQVNVETKLDTFATVYKKLTNKDVVFEFPVQQ 192
BLAST of EWM23287.1 vs. NCBI_GenBank
Match: gi|673036684|ref|XP_008872303.1| (hypothetical protein H310_08370 [Aphanomyces invadans] >gi|574471869|gb|ETV98875.1| hypothetical protein H310_08370 [Aphanomyces invadans]) HSP 1 Score: 261.536 bits (667), Expect = 5.794e-86 Identity = 132/193 (68.39%), Postives = 157/193 (81.35%), Query Frame = 0 Query: 24 IVMATKKIVKPRGQEPDEWDTKVASELMNLENNNPEWKADLKDLYITAAKEVDV-GKTQAIVVFVPYRLLKAYHKIQQRLVRELEKKFSGSHVVVIAQRTILGKSYGRSTKTKGPRPRSRTLTAVQDAILEDLVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLDTFKEVYKKLTNKEVEFTFFVKQ 215 +V T KIVKP GQ D+++ +VA EL+ LEN+ E KADLKDLYITAAK+VDV G +AIV+FVP+RLLK ++KIQ RLVRELEKKFSG HVV+IAQRTILGK + R PR RSRTLTAVQDAIL+DLVYPTEIVGKRTR ++DG+K LKV+LD KDQ+NV+ KLDTF VYKKLT+K+V F F V+Q Sbjct: 1 MVATTSKIVKPAGQVADDFEKQVAQELVTLENSAAEIKADLKDLYITAAKQVDVPGGRKAIVIFVPFRLLKNFNKIQARLVRELEKKFSGRHVVIIAQRTILGKGHSRGHNVSAPRARSRTLTAVQDAILDDLVYPTEIVGKRTRVRLDGSKLLKVYLDPKDQVNVETKLDTFATVYKKLTSKDVVFEFPVQQ 193 The following BLAST results are available for this feature:
BLAST of EWM23287.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10 Position : 0 Zoom : x 1
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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