EWM23333.1, cds7357 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23333.1 vs. NCBI_GenBank
Match: gi|585104340|gb|EWM23333.1| (Zinc finger, CCCH-type [Nannochloropsis gaditana]) HSP 1 Score: 1365.9 bits (3534), Expect = 0.000e+0 Identity = 667/667 (100.00%), Postives = 667/667 (100.00%), Query Frame = 0
Query: 1 MAPATPKYKLVRAEDSGAAGEKAVCAFFTLPQGCRNGANCSFVHAGTVAATVPAPRATLPNTTKNSHAMQQVRLQIGADKQGQSKKRTSSSPPSYSTAAHAEPRKRSKKQEPETDESTSTEEAEEEGLPRAVKAAVHIGPTSVTAVSRKNNIASTGKPTAEPCVGHDVTNPFLAVVPPPPATSHLRQPVAAAAKRGAPVHSVQKKRGDFSALSVSVPVQPSQSASSPASPRVGNGVSMLSKLSALPVTPFTIARKPNGATRDDDEPEDGELVQGEGEEGEDSAQSVVGANLSQHAKEESCQAEAVKEEVCFHAGSPWTGCVKATMEHARFEANYRALAAQKKGEADWIEAKKHGAWCRDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVCGHDEKQVLLDTLVLPSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMKHSRVVDTALLFEREDAPNHTPALKDVASALLGLDMADMHDSVADAQVTLRIARHFLDRGPVAPVPRLPAAPNKKGRRAEAVQSCLLLHRIPSFVTAAHIKDMFQTRTHVAPVTVDPVATSGAEGSLGRATARFLSKGHADLAFATLTGPARPDKDGRLQKRVHLAGKKDYVQVRLMYAPGEAGHEGRDGEEEPDLPSAKVF 667
MAPATPKYKLVRAEDSGAAGEKAVCAFFTLPQGCRNGANCSFVHAGTVAATVPAPRATLPNTTKNSHAMQQVRLQIGADKQGQSKKRTSSSPPSYSTAAHAEPRKRSKKQEPETDESTSTEEAEEEGLPRAVKAAVHIGPTSVTAVSRKNNIASTGKPTAEPCVGHDVTNPFLAVVPPPPATSHLRQPVAAAAKRGAPVHSVQKKRGDFSALSVSVPVQPSQSASSPASPRVGNGVSMLSKLSALPVTPFTIARKPNGATRDDDEPEDGELVQGEGEEGEDSAQSVVGANLSQHAKEESCQAEAVKEEVCFHAGSPWTGCVKATMEHARFEANYRALAAQKKGEADWIEAKKHGAWCRDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVCGHDEKQVLLDTLVLPSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMKHSRVVDTALLFEREDAPNHTPALKDVASALLGLDMADMHDSVADAQVTLRIARHFLDRGPVAPVPRLPAAPNKKGRRAEAVQSCLLLHRIPSFVTAAHIKDMFQTRTHVAPVTVDPVATSGAEGSLGRATARFLSKGHADLAFATLTGPARPDKDGRLQKRVHLAGKKDYVQVRLMYAPGEAGHEGRDGEEEPDLPSAKVF
Sbjct: 1 MAPATPKYKLVRAEDSGAAGEKAVCAFFTLPQGCRNGANCSFVHAGTVAATVPAPRATLPNTTKNSHAMQQVRLQIGADKQGQSKKRTSSSPPSYSTAAHAEPRKRSKKQEPETDESTSTEEAEEEGLPRAVKAAVHIGPTSVTAVSRKNNIASTGKPTAEPCVGHDVTNPFLAVVPPPPATSHLRQPVAAAAKRGAPVHSVQKKRGDFSALSVSVPVQPSQSASSPASPRVGNGVSMLSKLSALPVTPFTIARKPNGATRDDDEPEDGELVQGEGEEGEDSAQSVVGANLSQHAKEESCQAEAVKEEVCFHAGSPWTGCVKATMEHARFEANYRALAAQKKGEADWIEAKKHGAWCRDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVCGHDEKQVLLDTLVLPSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMKHSRVVDTALLFEREDAPNHTPALKDVASALLGLDMADMHDSVADAQVTLRIARHFLDRGPVAPVPRLPAAPNKKGRRAEAVQSCLLLHRIPSFVTAAHIKDMFQTRTHVAPVTVDPVATSGAEGSLGRATARFLSKGHADLAFATLTGPARPDKDGRLQKRVHLAGKKDYVQVRLMYAPGEAGHEGRDGEEEPDLPSAKVF 667
BLAST of EWM23333.1 vs. NCBI_GenBank
Match: gi|1072237833|gb|OEU22560.1| (hypothetical protein FRACYDRAFT_179299 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 272.707 bits (696), Expect = 3.071e-79 Identity = 143/335 (42.69%), Postives = 194/335 (57.91%), Query Frame = 0
Query: 314 GSPWTGCVKATMEHARFEAN-----YRALAAQKKGEADWIEAKKHGAWCRDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVCGHDEKQVLLDTLVLPSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMKHSRVVDTALLFEREDAPNHTPALKDVASALLGLDMADMHDSVADAQVTLRIARHFLDR-GPVAPVPRLPAAPNKKGRRAEAVQSCLLLHRIPSFVTAAHIKDMFQTRTHVAPVTVDPVATSGAEGSLGRATARFLSKGHADLAFATLTGPARPDKDGRLQKRVHLAGKKDYVQVRLM 642
G W V + +HAR+ + Y+ A+ ++ WI+AK +G+WC P +A+DCEMC ++DP+S ++ KAL RLSVV ++VLLDTLV PS PV DYRT I+G+ E L V FT RHAQA M+ LC ETV++GH L NDL AL M+H V D++ LF +D P TP+LKD + +M HDSV D++ L H++D G V V R PNKK E Q L +HRIP A H+ +MF T++ P V+ + S GSLG+ F S HA+L F +L G +K GR QK+V+L DY++VR M
Sbjct: 248 GRKWQNAVIESRKHARYNNSFDFNRYQENDAKNGIQSSWIKAKAYGSWCASNPQAIAIDCEMCESQDPLSGAKNAKALCRLSVVNAEKPEEVLLDTLVKPSWPVTDYRTRINGVTKEHLDPVEFTLRHAQAFMMALCNEETVIVGHALHNDLVALNMEHDVVADSSFLFHAKDNPTATPSLKDTVMTMFKKEMPQTHDSVNDSRKALECVMHWVDNDGKVESVERTAKYPNKK----EGNQ--LFVHRIPKVCKAEHLSNMFLKTTNIQPTEVEEIQFS---GSLGKTHVTFKSTRHANLVFESLEGKTEEEKSGRQQKKVYLRN-GDYIRVRKM 572
BLAST of EWM23333.1 vs. NCBI_GenBank
Match: gi|1210531592|dbj|GAX09948.1| (RNA exonuclease 1 [Fistulifera solaris]) HSP 1 Score: 250.366 bits (638), Expect = 1.798e-70 Identity = 134/339 (39.53%), Postives = 195/339 (57.52%), Query Frame = 0
Query: 313 AGSPWTGCVKATMEHARFEANYRALAAQKKGEAD-------WIEAKKHGAWCRDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVCGHDEKQVLLDTLVLPSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMKHSRVVDTALLFEREDAPNHTPALKDVASALLGLDMADMHDSVADAQVTLRIARHFLDRGP-VAPVPRLPAAPNKKGRRAEAVQSCLLLHRIPSFVTAAHIKDMFQTRTHVAPVTVDPVATSGAEGSLGRATARFLSKGHADLAFATLT-GPARPDKDGRLQKRVHLAGKKDYVQVRLM 642
A W ++ T F NY ++K E W++AK +GAWC LP V+A+DCEMC T+DPVS +++ AL R+S+V K+VLLD+L P+ PV ++R+ ++GI E L V FT RHAQA ++ LC ETV++GH + NDL A++M+H VVD+ALLF+ D+ T +LKD A ++LG DM D HDSV DA L ++L +G + + R P+ + S L +HRIP+ V H+ ++F + P++V+ + +G++G+ F S HA LAF L G PD GRLQK+V L K Y++VR M
Sbjct: 258 AAKKWINAIQTTQSSKAFAINYNFAKYKQKDEESGICSANGWVKAKPYGAWCEKLPQVIAIDCEMCETQDPVSGDKNFNALCRISIVDAV-TKEVLLDSLCKPAWPVSNHRSWVNGITEEHLENVQFTVRHAQAFLMALCSEETVIVGHAVHNDLAAVRMEHYCVVDSALLFKATDSETATVSLKDSAKSILGKDMPDTHDSVNDALTALECLEYYLQKGSDMKTIDRSSNTPS-SAKSFTFYASQLFVHRIPNTVNEEHLTNLFLAHADIKPLSVETIE---FQGNMGKTHVVFRSPEHATLAFQYLEGGKPEPDPSGRLQKKVFLRN-KSYIRVRKM 590
BLAST of EWM23333.1 vs. NCBI_GenBank
Match: gi|1210526827|dbj|GAX14475.1| (RNA exonuclease 1 [Fistulifera solaris]) HSP 1 Score: 248.44 bits (633), Expect = 2.307e-70 Identity = 136/355 (38.31%), Postives = 198/355 (55.77%), Query Frame = 0
Query: 313 AGSPWTGCVKATMEHARFEANYRALAAQKKGEAD-------WIEAKKHGAWCRDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVCGHDEKQVLLDTLVLPSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMKHSRVVDTALLFEREDAPNHTPALKDVASALLGLDMADMHDSVADAQVTLRIARHFLDRGP-VAPVPRLPAAPNKKGRRAEAVQSCLLLHRIPSFVTAAHIKDMFQTRTHVAPVTVDPVATSGAEGSLGRATARFLSKGHADLAFATLT-GPARPDKDGRLQKRVHLAGKKDYVQVRLMYAPGEAGHEGRDGEEE 658
A W ++ T F NY ++K E W++AK +G WC LP V+A+DCEMC T+DPVS +++ AL R+S+V K+VLLD+L P+ PV ++R+ ++GI E L V FT RHAQA ++ LC ETV++GH + NDL A++M+H VVD+ALLF+ D+ T +LKD A ++LG DM + HDSV DA L ++L +G + + R P+ + S L +HRIP+ V H+ ++F + P++V+ + +GS+G+ F S HA LAF L G PD GRLQK+V L K Y++VR M E D E +
Sbjct: 204 AAKKWINAIQTTQSSKAFAINYNFAKYKQKDEESGICSANGWVKAKPYGPWCEKLPQVIAIDCEMCETQDPVSGDKNFNALCRISIVDAV-TKEVLLDSLCKPAWPVSNHRSWVNGITEEHLENVQFTVRHAQAFLMALCSEETVIVGHAVHNDLAAVRMEHYCVVDSALLFKATDSETATVSLKDSAKSILGKDMPETHDSVNDALTALECLEYYLQKGSDMKTIDRSSNTPS-SAKSFTFYASQLFVHRIPNTVNEEHLTNLFLAHADIKPLSVETIE---FQGSMGKTHVVFRSPEHATLAFQYLEGGKPEPDPSGRLQKKVFLRN-KSYIRVRKMAFEKTEKTEKSDDEND 552
BLAST of EWM23333.1 vs. NCBI_GenBank
Match: gi|224009588|ref|XP_002293752.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220970424|gb|EED88761.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 248.44 bits (633), Expect = 5.283e-70 Identity = 142/336 (42.26%), Postives = 192/336 (57.14%), Query Frame = 0
Query: 317 WTGCVKATMEHARFEANYRALAAQKKGEAD--------WIEAKKHGAWCRDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVCGHDEKQVLLDTLVLPSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMKHSRVVDTALLFEREDAPNHTPALKDVASALLGLDMADMHDSVADAQVTLRIARHFLDR-GPVAPVPRLPAAPNKKGR-RAEAVQSCLLLHRIPSFVTAAHIKDMFQTRTHVAPVTVDPVATSGAEGSLGRATARFLSKGHADLAFATLTGPARPDKDGRLQKRVHLAGKKDYVQVRLM 642
W V AT +HA ++ N K+ E + WI + +G WC++ P +A+DCEMC T+DPV+ + D KAL RLSV+ + +VLLDTLV PV +YRT I+GI+ +DL V FT RHAQ M LC +TV++GH + NDL AL+M H DTA+L+ + TP+LK++A +L DM ++HDSV DA+V L A H+ + G V PV ++ N GR R A + LL+HR+P HI DMF T + P V + SG G+ F SK HA+LA+A+L G R DK G+ QKRV L YV VR M
Sbjct: 265 WKNAVIATRDHANYD-NAFNFERTKQLEFEQGISTPHHWITTRPYGDWCKNNPASIAIDCEMCETQDPVTGKTDTKALCRLSVINADNPTEVLLDTLVKSEWPVSNYRTWINGIKAKDLEGVQFTLRHAQMFMNALCSEQTVVVGHAVHNDLLALRMIHHCNADTAMLYNHSEEEGGTPSLKNLAYGVLKRDMPEVHDSVNDARVALACADHYCSKNGKVDPVEKVFRRNNGGGRDRDPADTAVLLVHRLPPTSQPGHIADMFLAYTCIKPKNVPEITFSGQH---GKCHVEFTSKDHAELAYASLNGEEREDKTGKKQKRVGLKNGS-YVCVRKM 595
BLAST of EWM23333.1 vs. NCBI_GenBank
Match: gi|298705427|emb|CBJ28710.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 247.284 bits (630), Expect = 4.156e-67 Identity = 145/357 (40.62%), Postives = 201/357 (56.30%), Query Frame = 0
Query: 317 WTGCVKATMEHARFEANYRALAAQKKGEADWIEAKKHGAWCRDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVCGHDEKQVLLDTLVLPSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMKHSRVVDTALLFEREDAPNHTPALKDVASALLGLDMAD-MHDSVADAQVTLRIARHFLDR--GPVAPVPRLPAAP-------------NKKGRRA---------------EAVQSCLLLHRIPSFVTAAHIKDMFQTRTHVAPVTVDPVATSGAEGSLGRATARFLSKGHADLAFATLTGPARPDKDGRLQKRVHLA--GKKDYVQVR 640
W G V+ T H +F NY + +A W+ A G C LP V+ALDCEMC + DP+S E++GK L+RLS+V G D ++ L+DTLV P PV+D+RTDIHG+ PE L VMFT RHAQ A+ +CC TV+IGH L NDL+ALKM H RVVDT+ LFE D TP+LKDV LG + D HDSV DA+ TL +AR+ L++ P+ P+ R A +K RR E + L++HR+P+ T + + Q +T V + + + G+ G+ + +K AD+AF ++ A+ D GRLQKR++ + GKK Y+ VR
Sbjct: 570 WQGLVERTRAHPKFAKNYSF-----ETDATWVTASPCGDSCPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGEDGEK-LMDTLVRPGNPVVDWRTDIHGVAPEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDLSALKMTHDRVVDTSFLFEGSDEKFSTPSLKDVVKVALGRHIQDGSHDSVTDAKSTLEVARYALEKVGAPLPPIDRTKKASRRWNGEGSSDDAGGRKKRRGLENGEDDADARAAKAEKERRSLMVHRLPAGTTPEQLMRVMQKKTKVIAQEAEGIEFT---GTTGKTHVVYATKELADVAFNGISTAAKEDTSGRLQKRIYTSEDGKK-YIAVR 916
BLAST of EWM23333.1 vs. NCBI_GenBank
Match: gi|219113087|ref|XP_002186127.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|209582977|gb|ACI65597.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 239.195 bits (609), Expect = 7.778e-67 Identity = 130/338 (38.46%), Postives = 194/338 (57.40%), Query Frame = 0
Query: 314 GSPWTGCVKATMEHARFE-----ANYRALAAQKKGE--ADWIEAKKHGAWCRDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVCGHDEKQVLLDTLVLPSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMKHSRVVDTALLFEREDAPNHTPALKDVASALLGLDMADMHDSVADAQVTLRIARHFLDR-GPVAPVPRLPAAPNKKGRRAEAVQSCLLLHRIP-SFVTAAHIKDMFQTRTHVAPVTVDPVATSGAEGSLGRATARFLSKGHADLAFATLTGPARPDKDGRLQKRVHLAGKKDYVQVRLM 642
G+ W ++ +H ++ Y+AL A+ + + WI+AK +G WC+ P +A+DCEMC T DPVS + + K L R+S+V ++ +VLLD+LV PS PV+DYR+ I+GI E L+ V FT RH QA ++ LC ETV++GH L NDL A++M+H D+A LF D+ + +LKD+AS +L M D HDSV DA+ ++ H++++ G V P+ R + + S L +HRIP + +H+ MF T +AP V+ + + G +G+ F S HA+LAF TL D GRLQK+V L Y++VR M
Sbjct: 234 GAKWMKAIQQARQHHKYATAYDFVKYKALDAEIGLDPSSTWIQAKPYGEWCKGFPQAIAIDCEMCETEDPVSGKHNAKDLCRVSIVNAEND-EVLLDSLVKPSWPVVDYRSRINGITEEHLKGVQFTLRHTQAFLMALCSQETVILGHALHNDLAAMRMEHYCNADSANLFSASDSERSSVSLKDLASNVLKKTMPDKHDSVNDARTAWKVLEHWVEKDGQVEPIVRSMSV-------KQTFASQLFIHRIPKNMCEESHLSRMFLAHTSIAPTEVEEIEFA---GEMGKTHVVFKSPQHANLAFDTLDSKTDTDPSGRLQKKVFLRN-GGYIRVRKM 559
BLAST of EWM23333.1 vs. NCBI_GenBank
Match: gi|1173954118|gb|OQS01611.1| (hypothetical protein ACHHYP_00624 [Achlya hypogyna]) HSP 1 Score: 159.458 bits (402), Expect = 3.079e-39 Identity = 110/353 (31.16%), Postives = 169/353 (47.88%), Query Frame = 0
Query: 324 TMEHARFEANYRALAAQKKGEADWIEAKKHGAWCR-DLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVCGHDEKQVLLDTLV---LPSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMKHSRVVDTALLFEREDAPN--HTPALKDVASALLGLDMADMHDSVADAQVTLRIARHFL------------------DRGPVAPVPRLPAAPNKKGRRAEAVQSC------LLLHRIPSFVTAAHIKDMFQTRTHVAPVTVDPVATSGAEGSLGRATARFLSKGHADLAFATLTGPARPDKDGRLQKRVHLAGKK--DYVQVRLMYA 644
T ++ RF Y +K + DW+ + ++ALDCEMC T DP + ++ KAL+R+++V G D + +L+D +V P V+ Y+TDIHGI P+ + A+ +L +T+++GH L DL +L +KH+ V+DT+ LF R+D P TP LKD+ + LL M D+HDS DA++T+ +A+H L D VA +P K VQ C +HRIP + + ++ T+T V P V+ + +GS F S HA LAFA L G D R K ++++ K Y ++ M A
Sbjct: 53 TQQNRRFNDFY-----EKMAKPDWVSTATMKRSSKAQYKRIVALDCEMCVTFDPSTETRNSKALVRVTLVDGEDPETILVDLIVHQPQPGHSVLLYKTDIHGIAPDLITNSKIDPARARKELLKHVGPDTIVVGHSLYGDLASLFLKHTNVIDTSFLFLRKDVPQIAQTPGLKDLTNQLLAFPMPDIHDSYLDAKMTMLVAKHALTCELGAVIEYDNAKASRRDDKTVAKSKLVPGVA-IKAVDPSKVQDCDSDASRWKVHRIPKGIFNSDLEQFIITKTSVVPALVENLVFKTPKGS---TVVHFASAAHAQLAFAMLEGVETKDPLNRPVKALNVSDAKGITYKGIKFMLA 396
BLAST of EWM23333.1 vs. NCBI_GenBank
Match: gi|635371061|emb|CCI40717.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 161.384 bits (407), Expect = 8.232e-39 Identity = 123/372 (33.06%), Postives = 180/372 (48.39%), Query Frame = 0
Query: 304 AVKEEVCFHAGSPWTGCVKATMEHARFEANYRALAAQKKGEADW--IEAKKHGAWCRDLPHVLALDCEMCAT-RDPVSMEQDGKALIRLSVVCGHDEKQVLLDTLVL----PSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMKHSRVVDTALLFER--EDAPNHTPALKDVASALLGLDMADMHDSVADAQVTLRIARHFLDRGPVAPVPRLPAAPNKKGRRAEA--VQSC-LLLHRIPSFVTAAHIKDMFQTRTHVAPVTVDPVATSGAEGS--LGRATARFLSKGHADLAFATL-------------------------TGPA---RPDKDGRLQKRVHLAGK 633
++KEEV F W V++T EH +E Y + + + G W +KK + + A+DCEMC D S + + KAL+R+SVV G D + + L++ P VIDY+T IHG+ P+ + + AQ ++ ++T+L+G L DL L++ H R +DTAL+++R ED P L+D+A LL +M HDSV DAQ+T+ A H G VP + G+R +A ++C L +HRIP V A I+ F + P +V+ + S A+G G FLSK HADLAF T+ T P+ D GR QKR+ L GK
Sbjct: 187 SLKEEVPF---EKWEELVRSTREHPEYEKLY-SFPSDQLG---WKRTRSKKKSTTLK----IAAIDCEMCVVGHDEDSSDINRKALVRVSVVNGEDLIRHIAADLIVHQPEPGYHVIDYKTFIHGLSPDQIHNSKISVAKAQKEVMKYISSDTILVGQSLDGDLKTLRITHDRCIDTALIYQRMTEDTNVQKPGLQDLAQHLLKFEMPQGHDSVLDAQITMLAAIHGAKYGYGKVVP----FNSDIGKRFDAALARTCRLRVHRIPKGVNVADIEKFFTEEAKIVPSSVESIMWSDAKGKTVYGSCHVTFLSKEHADLAFKTIPSVGKKKSVTKKRKEGELSNNTSATTTPSYLINYDILGRAQKRIKLNGK 543
BLAST of EWM23333.1 vs. NCBI_GenBank
Match: gi|301115722|ref|XP_002905590.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262110379|gb|EEY68431.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 152.91 bits (385), Expect = 3.467e-37 Identity = 119/368 (32.34%), Postives = 174/368 (47.28%), Query Frame = 0
Query: 317 WTGCVKATMEHARFEANYRALAAQKKGEADWIEAKKHGAWCRDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVCG-HDEKQVLLDTLV---LPSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMKHSRVVDTALLFERED-APNH-TPALKDVASALLGLDMADMHDSVADAQVTL----RIARHFLDR-----------GPVAPVP-RLP---------AAPNKKGRR----AEAVQSC-LLLHRIPSFVTAAHIKDMFQTRTHVAPVTVDPVATSGAEGSLGRATARFLSKGHADLAFATLTGP-----ARPDKDGRLQKRVHLAGK--KDYVQVRL 641
W V+ T + RFE L + E W+ K +++A+DCEMC T+D + E+ AL R+S V G H + ++ D +V P ++D +TDIHGI P+ + T AQ ML +T+++GH + DL ++++ H RV+DTAL+F+R+D +P+ TP LKD+ LLG DM HDS DAQ ++ ARH R P PVP ++P AA R+ A +SC L LHRIP +++ I+ F TH+ P V+ + + G F + HA LAF + GP D GR QK + + K Y V L
Sbjct: 20 WEQLVQLTQKSERFEK----LFTFPEDEPGWVTTKSKKKKTH--LNIVAVDCEMCVTQDESNCERKTNALCRVSAVDGEHMLRNIISDFIVHQPEPGFHMVDPKTDIHGITPQQIASCKITVAQAQKKMLKYINKDTIVVGHSVYGDLASMRINHRRVIDTALIFQRKDGSPSRATPGLKDLTKFLLGFDMPQGHDSTVDAQASMMAAKYAARHETGRIIPSALELHGPQPGKPVPVKIPVNDASYIDMAAIETTARKHKSEAMIARSCRLRLHRIPKGLSSKDIEKWFYENTHIVPTAVEKIVWLPNQNR-GSCNVTFSTNAHAALAFESAQGPNGKTKITNDSIGRPQKTIAIVSYMGKTYKNVAL 380 The following BLAST results are available for this feature:
BLAST of EWM23333.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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