EWM23333.1, cds7357 (CDS) Nannochloropsis gaditana

Overview
NameEWM23333.1
Unique Namecds7357
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:440550..442553 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23333.1
ProductZinc finger, CCCH-type
Orig transcript idgnl|cribi|Naga_100053g27.5073.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:440550..442553 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
GO:0046872metal ion binding
GO:0003676nucleic acid binding
GO:0004527exonuclease activity
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
IPR012337RNaseH-like_dom
IPR013520Exonuclease_RNaseT/DNA_pol3
IPR006055Exonuclease
Homology
BLAST of EWM23333.1 vs. NCBI_GenBank
Match: gi|585104340|gb|EWM23333.1| (Zinc finger, CCCH-type [Nannochloropsis gaditana])

HSP 1 Score: 1365.9 bits (3534), Expect = 0.000e+0
Identity = 667/667 (100.00%), Postives = 667/667 (100.00%), Query Frame = 0
Query:    1 MAPATPKYKLVRAEDSGAAGEKAVCAFFTLPQGCRNGANCSFVHAGTVAATVPAPRATLPNTTKNSHAMQQVRLQIGADKQGQSKKRTSSSPPSYSTAAHAEPRKRSKKQEPETDESTSTEEAEEEGLPRAVKAAVHIGPTSVTAVSRKNNIASTGKPTAEPCVGHDVTNPFLAVVPPPPATSHLRQPVAAAAKRGAPVHSVQKKRGDFSALSVSVPVQPSQSASSPASPRVGNGVSMLSKLSALPVTPFTIARKPNGATRDDDEPEDGELVQGEGEEGEDSAQSVVGANLSQHAKEESCQAEAVKEEVCFHAGSPWTGCVKATMEHARFEANYRALAAQKKGEADWIEAKKHGAWCRDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVCGHDEKQVLLDTLVLPSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMKHSRVVDTALLFEREDAPNHTPALKDVASALLGLDMADMHDSVADAQVTLRIARHFLDRGPVAPVPRLPAAPNKKGRRAEAVQSCLLLHRIPSFVTAAHIKDMFQTRTHVAPVTVDPVATSGAEGSLGRATARFLSKGHADLAFATLTGPARPDKDGRLQKRVHLAGKKDYVQVRLMYAPGEAGHEGRDGEEEPDLPSAKVF 667
            MAPATPKYKLVRAEDSGAAGEKAVCAFFTLPQGCRNGANCSFVHAGTVAATVPAPRATLPNTTKNSHAMQQVRLQIGADKQGQSKKRTSSSPPSYSTAAHAEPRKRSKKQEPETDESTSTEEAEEEGLPRAVKAAVHIGPTSVTAVSRKNNIASTGKPTAEPCVGHDVTNPFLAVVPPPPATSHLRQPVAAAAKRGAPVHSVQKKRGDFSALSVSVPVQPSQSASSPASPRVGNGVSMLSKLSALPVTPFTIARKPNGATRDDDEPEDGELVQGEGEEGEDSAQSVVGANLSQHAKEESCQAEAVKEEVCFHAGSPWTGCVKATMEHARFEANYRALAAQKKGEADWIEAKKHGAWCRDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVCGHDEKQVLLDTLVLPSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMKHSRVVDTALLFEREDAPNHTPALKDVASALLGLDMADMHDSVADAQVTLRIARHFLDRGPVAPVPRLPAAPNKKGRRAEAVQSCLLLHRIPSFVTAAHIKDMFQTRTHVAPVTVDPVATSGAEGSLGRATARFLSKGHADLAFATLTGPARPDKDGRLQKRVHLAGKKDYVQVRLMYAPGEAGHEGRDGEEEPDLPSAKVF
Sbjct:    1 MAPATPKYKLVRAEDSGAAGEKAVCAFFTLPQGCRNGANCSFVHAGTVAATVPAPRATLPNTTKNSHAMQQVRLQIGADKQGQSKKRTSSSPPSYSTAAHAEPRKRSKKQEPETDESTSTEEAEEEGLPRAVKAAVHIGPTSVTAVSRKNNIASTGKPTAEPCVGHDVTNPFLAVVPPPPATSHLRQPVAAAAKRGAPVHSVQKKRGDFSALSVSVPVQPSQSASSPASPRVGNGVSMLSKLSALPVTPFTIARKPNGATRDDDEPEDGELVQGEGEEGEDSAQSVVGANLSQHAKEESCQAEAVKEEVCFHAGSPWTGCVKATMEHARFEANYRALAAQKKGEADWIEAKKHGAWCRDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVCGHDEKQVLLDTLVLPSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMKHSRVVDTALLFEREDAPNHTPALKDVASALLGLDMADMHDSVADAQVTLRIARHFLDRGPVAPVPRLPAAPNKKGRRAEAVQSCLLLHRIPSFVTAAHIKDMFQTRTHVAPVTVDPVATSGAEGSLGRATARFLSKGHADLAFATLTGPARPDKDGRLQKRVHLAGKKDYVQVRLMYAPGEAGHEGRDGEEEPDLPSAKVF 667          
BLAST of EWM23333.1 vs. NCBI_GenBank
Match: gi|1072237833|gb|OEU22560.1| (hypothetical protein FRACYDRAFT_179299 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 272.707 bits (696), Expect = 3.071e-79
Identity = 143/335 (42.69%), Postives = 194/335 (57.91%), Query Frame = 0
Query:  314 GSPWTGCVKATMEHARFEAN-----YRALAAQKKGEADWIEAKKHGAWCRDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVCGHDEKQVLLDTLVLPSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMKHSRVVDTALLFEREDAPNHTPALKDVASALLGLDMADMHDSVADAQVTLRIARHFLDR-GPVAPVPRLPAAPNKKGRRAEAVQSCLLLHRIPSFVTAAHIKDMFQTRTHVAPVTVDPVATSGAEGSLGRATARFLSKGHADLAFATLTGPARPDKDGRLQKRVHLAGKKDYVQVRLM 642
            G  W   V  + +HAR+  +     Y+   A+   ++ WI+AK +G+WC   P  +A+DCEMC ++DP+S  ++ KAL RLSVV     ++VLLDTLV PS PV DYRT I+G+  E L  V FT RHAQA M+ LC  ETV++GH L NDL AL M+H  V D++ LF  +D P  TP+LKD    +   +M   HDSV D++  L    H++D  G V  V R    PNKK    E  Q  L +HRIP    A H+ +MF   T++ P  V+ +  S   GSLG+    F S  HA+L F +L G    +K GR QK+V+L    DY++VR M
Sbjct:  248 GRKWQNAVIESRKHARYNNSFDFNRYQENDAKNGIQSSWIKAKAYGSWCASNPQAIAIDCEMCESQDPLSGAKNAKALCRLSVVNAEKPEEVLLDTLVKPSWPVTDYRTRINGVTKEHLDPVEFTLRHAQAFMMALCNEETVIVGHALHNDLVALNMEHDVVADSSFLFHAKDNPTATPSLKDTVMTMFKKEMPQTHDSVNDSRKALECVMHWVDNDGKVESVERTAKYPNKK----EGNQ--LFVHRIPKVCKAEHLSNMFLKTTNIQPTEVEEIQFS---GSLGKTHVTFKSTRHANLVFESLEGKTEEEKSGRQQKKVYLRN-GDYIRVRKM 572          
BLAST of EWM23333.1 vs. NCBI_GenBank
Match: gi|1210531592|dbj|GAX09948.1| (RNA exonuclease 1 [Fistulifera solaris])

HSP 1 Score: 250.366 bits (638), Expect = 1.798e-70
Identity = 134/339 (39.53%), Postives = 195/339 (57.52%), Query Frame = 0
Query:  313 AGSPWTGCVKATMEHARFEANYRALAAQKKGEAD-------WIEAKKHGAWCRDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVCGHDEKQVLLDTLVLPSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMKHSRVVDTALLFEREDAPNHTPALKDVASALLGLDMADMHDSVADAQVTLRIARHFLDRGP-VAPVPRLPAAPNKKGRRAEAVQSCLLLHRIPSFVTAAHIKDMFQTRTHVAPVTVDPVATSGAEGSLGRATARFLSKGHADLAFATLT-GPARPDKDGRLQKRVHLAGKKDYVQVRLM 642
            A   W   ++ T     F  NY     ++K E         W++AK +GAWC  LP V+A+DCEMC T+DPVS +++  AL R+S+V     K+VLLD+L  P+ PV ++R+ ++GI  E L  V FT RHAQA ++ LC  ETV++GH + NDL A++M+H  VVD+ALLF+  D+   T +LKD A ++LG DM D HDSV DA   L    ++L +G  +  + R    P+   +      S L +HRIP+ V   H+ ++F     + P++V+ +     +G++G+    F S  HA LAF  L  G   PD  GRLQK+V L   K Y++VR M
Sbjct:  258 AAKKWINAIQTTQSSKAFAINYNFAKYKQKDEESGICSANGWVKAKPYGAWCEKLPQVIAIDCEMCETQDPVSGDKNFNALCRISIVDAV-TKEVLLDSLCKPAWPVSNHRSWVNGITEEHLENVQFTVRHAQAFLMALCSEETVIVGHAVHNDLAAVRMEHYCVVDSALLFKATDSETATVSLKDSAKSILGKDMPDTHDSVNDALTALECLEYYLQKGSDMKTIDRSSNTPS-SAKSFTFYASQLFVHRIPNTVNEEHLTNLFLAHADIKPLSVETIE---FQGNMGKTHVVFRSPEHATLAFQYLEGGKPEPDPSGRLQKKVFLRN-KSYIRVRKM 590          
BLAST of EWM23333.1 vs. NCBI_GenBank
Match: gi|1210526827|dbj|GAX14475.1| (RNA exonuclease 1 [Fistulifera solaris])

HSP 1 Score: 248.44 bits (633), Expect = 2.307e-70
Identity = 136/355 (38.31%), Postives = 198/355 (55.77%), Query Frame = 0
Query:  313 AGSPWTGCVKATMEHARFEANYRALAAQKKGEAD-------WIEAKKHGAWCRDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVCGHDEKQVLLDTLVLPSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMKHSRVVDTALLFEREDAPNHTPALKDVASALLGLDMADMHDSVADAQVTLRIARHFLDRGP-VAPVPRLPAAPNKKGRRAEAVQSCLLLHRIPSFVTAAHIKDMFQTRTHVAPVTVDPVATSGAEGSLGRATARFLSKGHADLAFATLT-GPARPDKDGRLQKRVHLAGKKDYVQVRLMYAPGEAGHEGRDGEEE 658
            A   W   ++ T     F  NY     ++K E         W++AK +G WC  LP V+A+DCEMC T+DPVS +++  AL R+S+V     K+VLLD+L  P+ PV ++R+ ++GI  E L  V FT RHAQA ++ LC  ETV++GH + NDL A++M+H  VVD+ALLF+  D+   T +LKD A ++LG DM + HDSV DA   L    ++L +G  +  + R    P+   +      S L +HRIP+ V   H+ ++F     + P++V+ +     +GS+G+    F S  HA LAF  L  G   PD  GRLQK+V L   K Y++VR M        E  D E +
Sbjct:  204 AAKKWINAIQTTQSSKAFAINYNFAKYKQKDEESGICSANGWVKAKPYGPWCEKLPQVIAIDCEMCETQDPVSGDKNFNALCRISIVDAV-TKEVLLDSLCKPAWPVSNHRSWVNGITEEHLENVQFTVRHAQAFLMALCSEETVIVGHAVHNDLAAVRMEHYCVVDSALLFKATDSETATVSLKDSAKSILGKDMPETHDSVNDALTALECLEYYLQKGSDMKTIDRSSNTPS-SAKSFTFYASQLFVHRIPNTVNEEHLTNLFLAHADIKPLSVETIE---FQGSMGKTHVVFRSPEHATLAFQYLEGGKPEPDPSGRLQKKVFLRN-KSYIRVRKMAFEKTEKTEKSDDEND 552          
BLAST of EWM23333.1 vs. NCBI_GenBank
Match: gi|224009588|ref|XP_002293752.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220970424|gb|EED88761.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 248.44 bits (633), Expect = 5.283e-70
Identity = 142/336 (42.26%), Postives = 192/336 (57.14%), Query Frame = 0
Query:  317 WTGCVKATMEHARFEANYRALAAQKKGEAD--------WIEAKKHGAWCRDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVCGHDEKQVLLDTLVLPSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMKHSRVVDTALLFEREDAPNHTPALKDVASALLGLDMADMHDSVADAQVTLRIARHFLDR-GPVAPVPRLPAAPNKKGR-RAEAVQSCLLLHRIPSFVTAAHIKDMFQTRTHVAPVTVDPVATSGAEGSLGRATARFLSKGHADLAFATLTGPARPDKDGRLQKRVHLAGKKDYVQVRLM 642
            W   V AT +HA ++ N       K+ E +        WI  + +G WC++ P  +A+DCEMC T+DPV+ + D KAL RLSV+   +  +VLLDTLV    PV +YRT I+GI+ +DL  V FT RHAQ  M  LC  +TV++GH + NDL AL+M H    DTA+L+   +    TP+LK++A  +L  DM ++HDSV DA+V L  A H+  + G V PV ++    N  GR R  A  + LL+HR+P      HI DMF   T + P  V  +  SG     G+    F SK HA+LA+A+L G  R DK G+ QKRV L     YV VR M
Sbjct:  265 WKNAVIATRDHANYD-NAFNFERTKQLEFEQGISTPHHWITTRPYGDWCKNNPASIAIDCEMCETQDPVTGKTDTKALCRLSVINADNPTEVLLDTLVKSEWPVSNYRTWINGIKAKDLEGVQFTLRHAQMFMNALCSEQTVVVGHAVHNDLLALRMIHHCNADTAMLYNHSEEEGGTPSLKNLAYGVLKRDMPEVHDSVNDARVALACADHYCSKNGKVDPVEKVFRRNNGGGRDRDPADTAVLLVHRLPPTSQPGHIADMFLAYTCIKPKNVPEITFSGQH---GKCHVEFTSKDHAELAYASLNGEEREDKTGKKQKRVGLKNGS-YVCVRKM 595          
BLAST of EWM23333.1 vs. NCBI_GenBank
Match: gi|298705427|emb|CBJ28710.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 247.284 bits (630), Expect = 4.156e-67
Identity = 145/357 (40.62%), Postives = 201/357 (56.30%), Query Frame = 0
Query:  317 WTGCVKATMEHARFEANYRALAAQKKGEADWIEAKKHGAWCRDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVCGHDEKQVLLDTLVLPSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMKHSRVVDTALLFEREDAPNHTPALKDVASALLGLDMAD-MHDSVADAQVTLRIARHFLDR--GPVAPVPRLPAAP-------------NKKGRRA---------------EAVQSCLLLHRIPSFVTAAHIKDMFQTRTHVAPVTVDPVATSGAEGSLGRATARFLSKGHADLAFATLTGPARPDKDGRLQKRVHLA--GKKDYVQVR 640
            W G V+ T  H +F  NY       + +A W+ A   G  C  LP V+ALDCEMC + DP+S E++GK L+RLS+V G D ++ L+DTLV P  PV+D+RTDIHG+ PE L  VMFT RHAQ A+  +CC  TV+IGH L NDL+ALKM H RVVDT+ LFE  D    TP+LKDV    LG  + D  HDSV DA+ TL +AR+ L++   P+ P+ R   A               +K RR                E  +  L++HR+P+  T   +  + Q +T V     + +  +   G+ G+    + +K  AD+AF  ++  A+ D  GRLQKR++ +  GKK Y+ VR
Sbjct:  570 WQGLVERTRAHPKFAKNYSF-----ETDATWVTASPCGDSCPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGEDGEK-LMDTLVRPGNPVVDWRTDIHGVAPEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDLSALKMTHDRVVDTSFLFEGSDEKFSTPSLKDVVKVALGRHIQDGSHDSVTDAKSTLEVARYALEKVGAPLPPIDRTKKASRRWNGEGSSDDAGGRKKRRGLENGEDDADARAAKAEKERRSLMVHRLPAGTTPEQLMRVMQKKTKVIAQEAEGIEFT---GTTGKTHVVYATKELADVAFNGISTAAKEDTSGRLQKRIYTSEDGKK-YIAVR 916          
BLAST of EWM23333.1 vs. NCBI_GenBank
Match: gi|219113087|ref|XP_002186127.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|209582977|gb|ACI65597.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 239.195 bits (609), Expect = 7.778e-67
Identity = 130/338 (38.46%), Postives = 194/338 (57.40%), Query Frame = 0
Query:  314 GSPWTGCVKATMEHARFE-----ANYRALAAQKKGE--ADWIEAKKHGAWCRDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVCGHDEKQVLLDTLVLPSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMKHSRVVDTALLFEREDAPNHTPALKDVASALLGLDMADMHDSVADAQVTLRIARHFLDR-GPVAPVPRLPAAPNKKGRRAEAVQSCLLLHRIP-SFVTAAHIKDMFQTRTHVAPVTVDPVATSGAEGSLGRATARFLSKGHADLAFATLTGPARPDKDGRLQKRVHLAGKKDYVQVRLM 642
            G+ W   ++   +H ++        Y+AL A+   +  + WI+AK +G WC+  P  +A+DCEMC T DPVS + + K L R+S+V   ++ +VLLD+LV PS PV+DYR+ I+GI  E L+ V FT RH QA ++ LC  ETV++GH L NDL A++M+H    D+A LF   D+   + +LKD+AS +L   M D HDSV DA+   ++  H++++ G V P+ R  +         +   S L +HRIP +    +H+  MF   T +AP  V+ +  +   G +G+    F S  HA+LAF TL      D  GRLQK+V L     Y++VR M
Sbjct:  234 GAKWMKAIQQARQHHKYATAYDFVKYKALDAEIGLDPSSTWIQAKPYGEWCKGFPQAIAIDCEMCETEDPVSGKHNAKDLCRVSIVNAEND-EVLLDSLVKPSWPVVDYRSRINGITEEHLKGVQFTLRHTQAFLMALCSQETVILGHALHNDLAAMRMEHYCNADSANLFSASDSERSSVSLKDLASNVLKKTMPDKHDSVNDARTAWKVLEHWVEKDGQVEPIVRSMSV-------KQTFASQLFIHRIPKNMCEESHLSRMFLAHTSIAPTEVEEIEFA---GEMGKTHVVFKSPQHANLAFDTLDSKTDTDPSGRLQKKVFLRN-GGYIRVRKM 559          
BLAST of EWM23333.1 vs. NCBI_GenBank
Match: gi|1173954118|gb|OQS01611.1| (hypothetical protein ACHHYP_00624 [Achlya hypogyna])

HSP 1 Score: 159.458 bits (402), Expect = 3.079e-39
Identity = 110/353 (31.16%), Postives = 169/353 (47.88%), Query Frame = 0
Query:  324 TMEHARFEANYRALAAQKKGEADWIEAKKHGAWCR-DLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVCGHDEKQVLLDTLV---LPSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMKHSRVVDTALLFEREDAPN--HTPALKDVASALLGLDMADMHDSVADAQVTLRIARHFL------------------DRGPVAPVPRLPAAPNKKGRRAEAVQSC------LLLHRIPSFVTAAHIKDMFQTRTHVAPVTVDPVATSGAEGSLGRATARFLSKGHADLAFATLTGPARPDKDGRLQKRVHLAGKK--DYVQVRLMYA 644
            T ++ RF   Y     +K  + DW+         +     ++ALDCEMC T DP +  ++ KAL+R+++V G D + +L+D +V    P   V+ Y+TDIHGI P+ +         A+  +L     +T+++GH L  DL +L +KH+ V+DT+ LF R+D P    TP LKD+ + LL   M D+HDS  DA++T+ +A+H L                  D   VA    +P     K      VQ C        +HRIP  +  + ++    T+T V P  V+ +     +GS       F S  HA LAFA L G    D   R  K ++++  K   Y  ++ M A
Sbjct:   53 TQQNRRFNDFY-----EKMAKPDWVSTATMKRSSKAQYKRIVALDCEMCVTFDPSTETRNSKALVRVTLVDGEDPETILVDLIVHQPQPGHSVLLYKTDIHGIAPDLITNSKIDPARARKELLKHVGPDTIVVGHSLYGDLASLFLKHTNVIDTSFLFLRKDVPQIAQTPGLKDLTNQLLAFPMPDIHDSYLDAKMTMLVAKHALTCELGAVIEYDNAKASRRDDKTVAKSKLVPGVA-IKAVDPSKVQDCDSDASRWKVHRIPKGIFNSDLEQFIITKTSVVPALVENLVFKTPKGS---TVVHFASAAHAQLAFAMLEGVETKDPLNRPVKALNVSDAKGITYKGIKFMLA 396          
BLAST of EWM23333.1 vs. NCBI_GenBank
Match: gi|635371061|emb|CCI40717.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 161.384 bits (407), Expect = 8.232e-39
Identity = 123/372 (33.06%), Postives = 180/372 (48.39%), Query Frame = 0
Query:  304 AVKEEVCFHAGSPWTGCVKATMEHARFEANYRALAAQKKGEADW--IEAKKHGAWCRDLPHVLALDCEMCAT-RDPVSMEQDGKALIRLSVVCGHDEKQVLLDTLVL----PSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMKHSRVVDTALLFER--EDAPNHTPALKDVASALLGLDMADMHDSVADAQVTLRIARHFLDRGPVAPVPRLPAAPNKKGRRAEA--VQSC-LLLHRIPSFVTAAHIKDMFQTRTHVAPVTVDPVATSGAEGS--LGRATARFLSKGHADLAFATL-------------------------TGPA---RPDKDGRLQKRVHLAGK 633
            ++KEEV F     W   V++T EH  +E  Y +  + + G   W    +KK     +    + A+DCEMC    D  S + + KAL+R+SVV G D  + +   L++    P   VIDY+T IHG+ P+ +     +   AQ  ++    ++T+L+G  L  DL  L++ H R +DTAL+++R  ED     P L+D+A  LL  +M   HDSV DAQ+T+  A H    G    VP      +  G+R +A   ++C L +HRIP  V  A I+  F     + P +V+ +  S A+G    G     FLSK HADLAF T+                         T P+     D  GR QKR+ L GK
Sbjct:  187 SLKEEVPF---EKWEELVRSTREHPEYEKLY-SFPSDQLG---WKRTRSKKKSTTLK----IAAIDCEMCVVGHDEDSSDINRKALVRVSVVNGEDLIRHIAADLIVHQPEPGYHVIDYKTFIHGLSPDQIHNSKISVAKAQKEVMKYISSDTILVGQSLDGDLKTLRITHDRCIDTALIYQRMTEDTNVQKPGLQDLAQHLLKFEMPQGHDSVLDAQITMLAAIHGAKYGYGKVVP----FNSDIGKRFDAALARTCRLRVHRIPKGVNVADIEKFFTEEAKIVPSSVESIMWSDAKGKTVYGSCHVTFLSKEHADLAFKTIPSVGKKKSVTKKRKEGELSNNTSATTTPSYLINYDILGRAQKRIKLNGK 543          
BLAST of EWM23333.1 vs. NCBI_GenBank
Match: gi|301115722|ref|XP_002905590.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262110379|gb|EEY68431.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 152.91 bits (385), Expect = 3.467e-37
Identity = 119/368 (32.34%), Postives = 174/368 (47.28%), Query Frame = 0
Query:  317 WTGCVKATMEHARFEANYRALAAQKKGEADWIEAKKHGAWCRDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVCG-HDEKQVLLDTLV---LPSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMKHSRVVDTALLFERED-APNH-TPALKDVASALLGLDMADMHDSVADAQVTL----RIARHFLDR-----------GPVAPVP-RLP---------AAPNKKGRR----AEAVQSC-LLLHRIPSFVTAAHIKDMFQTRTHVAPVTVDPVATSGAEGSLGRATARFLSKGHADLAFATLTGP-----ARPDKDGRLQKRVHLAGK--KDYVQVRL 641
            W   V+ T +  RFE     L    + E  W+  K          +++A+DCEMC T+D  + E+   AL R+S V G H  + ++ D +V    P   ++D +TDIHGI P+ +     T   AQ  ML     +T+++GH +  DL ++++ H RV+DTAL+F+R+D +P+  TP LKD+   LLG DM   HDS  DAQ ++      ARH   R            P  PVP ++P         AA     R+    A   +SC L LHRIP  +++  I+  F   TH+ P  V+ +     +   G     F +  HA LAF +  GP        D  GR QK + +     K Y  V L
Sbjct:   20 WEQLVQLTQKSERFEK----LFTFPEDEPGWVTTKSKKKKTH--LNIVAVDCEMCVTQDESNCERKTNALCRVSAVDGEHMLRNIISDFIVHQPEPGFHMVDPKTDIHGITPQQIASCKITVAQAQKKMLKYINKDTIVVGHSVYGDLASMRINHRRVIDTALIFQRKDGSPSRATPGLKDLTKFLLGFDMPQGHDSTVDAQASMMAAKYAARHETGRIIPSALELHGPQPGKPVPVKIPVNDASYIDMAAIETTARKHKSEAMIARSCRLRLHRIPKGLSSKDIEKWFYENTHIVPTAVEKIVWLPNQNR-GSCNVTFSTNAHAALAFESAQGPNGKTKITNDSIGRPQKTIAIVSYMGKTYKNVAL 380          
The following BLAST results are available for this feature:
BLAST of EWM23333.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104340|gb|EWM23333.1|0.000e+0100.00Zinc finger, CCCH-type [Nannochloropsis gaditana][more]
gi|1072237833|gb|OEU22560.1|3.071e-7942.69hypothetical protein FRACYDRAFT_179299 [Fragilario... [more]
gi|1210531592|dbj|GAX09948.1|1.798e-7039.53RNA exonuclease 1 [Fistulifera solaris][more]
gi|1210526827|dbj|GAX14475.1|2.307e-7038.31RNA exonuclease 1 [Fistulifera solaris][more]
gi|224009588|ref|XP_002293752.1|5.283e-7042.26predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|298705427|emb|CBJ28710.1|4.156e-6740.62conserved unknown protein [Ectocarpus siliculosus][more]
gi|219113087|ref|XP_002186127.1|7.778e-6738.46predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1173954118|gb|OQS01611.1|3.079e-3931.16hypothetical protein ACHHYP_00624 [Achlya hypogyna... [more]
gi|635371061|emb|CCI40717.1|8.232e-3933.06unnamed protein product [Albugo candida][more]
gi|301115722|ref|XP_002905590.1|3.467e-3732.34conserved hypothetical protein [Phytophthora infes... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7374rna7374Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications