EWM23343.1, cds7330 (CDS) Nannochloropsis gaditana

Overview
NameEWM23343.1
Unique Namecds7330
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:386990..387454 -

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Properties
Property NameValue
Protein idEWM23343.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100057g1.3902.mrna
GbkeyCDS
End range.
End range387454
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:386990..387454 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM23343.1 vs. NCBI_GenBank
Match: gi|585104351|gb|EWM23343.1| (hypothetical protein Naga_100057g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 322.398 bits (825), Expect = 1.075e-111
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0 
Query:    1 VRYHLIDNATVFTDALAHHVPFDQHFVASCVPEQKDMSILRSMHRQAKTVDCVQNSGAENKHNFVTMAFETTCSVEDVEMALKLGLIRVGVQLSGFAKKPVRKGFITCQDMLEVLPFDEEDHDDSIESFDFDEDEFWEEEWDEPRAAQKKRNRM 154
            VRYHLIDNATVFTDALAHHVPFDQHFVASCVPEQKDMSILRSMHRQAKTVDCVQNSGAENKHNFVTMAFETTCSVEDVEMALKLGLIRVGVQLSGFAKKPVRKGFITCQDMLEVLPFDEEDHDDSIESFDFDEDEFWEEEWDEPRAAQKKRNRM
Sbjct:    1 VRYHLIDNATVFTDALAHHVPFDQHFVASCVPEQKDMSILRSMHRQAKTVDCVQNSGAENKHNFVTMAFETTCSVEDVEMALKLGLIRVGVQLSGFAKKPVRKGFITCQDMLEVLPFDEEDHDDSIESFDFDEDEFWEEEWDEPRAAQKKRNRM 154
[Close]
BLAST of EWM23343.1 vs. NCBI_GenBank
Match: gi|553194524|ref|XP_005855978.1| (hypothetical protein NGA_0524300 [Nannochloropsis gaditana CCMP526] >gi|422293086|gb|EKU20387.1| hypothetical protein NGA_0524300 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 323.939 bits (829), Expect = 1.095e-110
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0 
Query:    1 VRYHLIDNATVFTDALAHHVPFDQHFVASCVPEQKDMSILRSMHRQAKTVDCVQNSGAENKHNFVTMAFETTCSVEDVEMALKLGLIRVGVQLSGFAKKPVRKGFITCQDMLEVLPFDEEDHDDSIESFDFDEDEFWEEEWDEPRAAQKKRNRM 154
            VRYHLIDNATVFTDALAHHVPFDQHFVASCVPEQKDMSILRSMHRQAKTVDCVQNSGAENKHNFVTMAFETTCSVEDVEMALKLGLIRVGVQLSGFAKKPVRKGFITCQDMLEVLPFDEEDHDDSIESFDFDEDEFWEEEWDEPRAAQKKRNRM
Sbjct:  112 VRYHLIDNATVFTDALAHHVPFDQHFVASCVPEQKDMSILRSMHRQAKTVDCVQNSGAENKHNFVTMAFETTCSVEDVEMALKLGLIRVGVQLSGFAKKPVRKGFITCQDMLEVLPFDEEDHDDSIESFDFDEDEFWEEEWDEPRAAQKKRNRM 265
The following BLAST results are available for this feature:
BLAST of EWM23343.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585104351|gb|EWM23343.1|1.075e-111100.00hypothetical protein Naga_100057g1, partial [Nanno... [more]
gi|553194524|ref|XP_005855978.1|1.095e-110100.00hypothetical protein NGA_0524300 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7347rna7347Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications