EWM23346.1, cds7329 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM23346.1 vs. NCBI_GenBank
Match: gi|585104354|gb|EWM23346.1| (hypothetical protein Naga_100057g2 [Nannochloropsis gaditana]) HSP 1 Score: 2066.2 bits (5352), Expect = 0.000e+0 Identity = 1034/1034 (100.00%), Postives = 1034/1034 (100.00%), Query Frame = 0 Query: 1 MLAGEAVDVQVVAKQRGRRQACYSCRPVSVMPSFALGLISFLFFQLGNINAFVLPCWVSSFMDRGHFRPHAVVQEEDRRAISRVKPTSSNLASRFRNASPPNEIHDSILDADMDFFAVVSAKSTGRFPENGTTPTPSVPLNLVTETVSWLSDKWYGIVSKKTREASRLRIVGEGMGLGPKNETRSTRTGPQAGRGGNEGTESISGPGHKQTGGLMGQNKAKKKGNEAASLRRGSAGGGVKKTMKAFADGWSVSAGAWAARAKASGLGAWSGLRSKVSTLLPKSMERIGARMKKKRKGAAGRGRPGSARSPREQMAEQRKKRQAGKPADSGARSGVNLKSFLLPSLLQRIDPSAYSAGVWRQTVFPGQGERGRPGREEGPDAVDLEPPSGRPPVFDDLVEFPRGPAEAWDLFVGDARHLADSIYRLLAPAAALPKAGPSRPQVGARPKAARVKQGPLYATPLVLRQKKAKAAVAASASTAWPQVSGPGGEGDTEREKMELEALDWADHGVDMEKEEQGDAESEVWQGLRGRVREMIEESAGAPSGAEYYAMEGAGSEPREQETGAGRSTPSSRPGEERQERRPSRARNLPVPLRAPRLVDRLDERPRGIAAAGSSLPVTPAAASETFSDERIMDARVALPPFPSRPPMEDEYWPVPASSAFHASSAFDEEEEMGEGRAEEDGEDLDDTAVAPWRRGLPEWLKRVSLTRLLVRKPTPERMLEVIRRRQQVRRMPRKMDDAFLRTVSRKLQGNRLRIRSFQLQTDRYRNSLLSAGAYVDAVVSLFGSAKEAEEVLLPLTRWLPEASKRRGLSDEYWARRRARLGGLQTVESRQGGEGSAAGGTRALLKEAGRVGLTASTAWMARMKAAVSERVVGLTRGLEELGRALGSITCGKSTLIELSFEGGKEEEEAKDGKSMSIDDPTVLALTELERELKGRGQVGGNGGDDDPMARIEDILGDRNAAYFQQRLDLYMRGGLSGMDLYRALKRLCLANEMRLDLVMRQLREESLRGDERWRSQNERLGALLRIHEGQRKIIW 1034 MLAGEAVDVQVVAKQRGRRQACYSCRPVSVMPSFALGLISFLFFQLGNINAFVLPCWVSSFMDRGHFRPHAVVQEEDRRAISRVKPTSSNLASRFRNASPPNEIHDSILDADMDFFAVVSAKSTGRFPENGTTPTPSVPLNLVTETVSWLSDKWYGIVSKKTREASRLRIVGEGMGLGPKNETRSTRTGPQAGRGGNEGTESISGPGHKQTGGLMGQNKAKKKGNEAASLRRGSAGGGVKKTMKAFADGWSVSAGAWAARAKASGLGAWSGLRSKVSTLLPKSMERIGARMKKKRKGAAGRGRPGSARSPREQMAEQRKKRQAGKPADSGARSGVNLKSFLLPSLLQRIDPSAYSAGVWRQTVFPGQGERGRPGREEGPDAVDLEPPSGRPPVFDDLVEFPRGPAEAWDLFVGDARHLADSIYRLLAPAAALPKAGPSRPQVGARPKAARVKQGPLYATPLVLRQKKAKAAVAASASTAWPQVSGPGGEGDTEREKMELEALDWADHGVDMEKEEQGDAESEVWQGLRGRVREMIEESAGAPSGAEYYAMEGAGSEPREQETGAGRSTPSSRPGEERQERRPSRARNLPVPLRAPRLVDRLDERPRGIAAAGSSLPVTPAAASETFSDERIMDARVALPPFPSRPPMEDEYWPVPASSAFHASSAFDEEEEMGEGRAEEDGEDLDDTAVAPWRRGLPEWLKRVSLTRLLVRKPTPERMLEVIRRRQQVRRMPRKMDDAFLRTVSRKLQGNRLRIRSFQLQTDRYRNSLLSAGAYVDAVVSLFGSAKEAEEVLLPLTRWLPEASKRRGLSDEYWARRRARLGGLQTVESRQGGEGSAAGGTRALLKEAGRVGLTASTAWMARMKAAVSERVVGLTRGLEELGRALGSITCGKSTLIELSFEGGKEEEEAKDGKSMSIDDPTVLALTELERELKGRGQVGGNGGDDDPMARIEDILGDRNAAYFQQRLDLYMRGGLSGMDLYRALKRLCLANEMRLDLVMRQLREESLRGDERWRSQNERLGALLRIHEGQRKIIW Sbjct: 1 MLAGEAVDVQVVAKQRGRRQACYSCRPVSVMPSFALGLISFLFFQLGNINAFVLPCWVSSFMDRGHFRPHAVVQEEDRRAISRVKPTSSNLASRFRNASPPNEIHDSILDADMDFFAVVSAKSTGRFPENGTTPTPSVPLNLVTETVSWLSDKWYGIVSKKTREASRLRIVGEGMGLGPKNETRSTRTGPQAGRGGNEGTESISGPGHKQTGGLMGQNKAKKKGNEAASLRRGSAGGGVKKTMKAFADGWSVSAGAWAARAKASGLGAWSGLRSKVSTLLPKSMERIGARMKKKRKGAAGRGRPGSARSPREQMAEQRKKRQAGKPADSGARSGVNLKSFLLPSLLQRIDPSAYSAGVWRQTVFPGQGERGRPGREEGPDAVDLEPPSGRPPVFDDLVEFPRGPAEAWDLFVGDARHLADSIYRLLAPAAALPKAGPSRPQVGARPKAARVKQGPLYATPLVLRQKKAKAAVAASASTAWPQVSGPGGEGDTEREKMELEALDWADHGVDMEKEEQGDAESEVWQGLRGRVREMIEESAGAPSGAEYYAMEGAGSEPREQETGAGRSTPSSRPGEERQERRPSRARNLPVPLRAPRLVDRLDERPRGIAAAGSSLPVTPAAASETFSDERIMDARVALPPFPSRPPMEDEYWPVPASSAFHASSAFDEEEEMGEGRAEEDGEDLDDTAVAPWRRGLPEWLKRVSLTRLLVRKPTPERMLEVIRRRQQVRRMPRKMDDAFLRTVSRKLQGNRLRIRSFQLQTDRYRNSLLSAGAYVDAVVSLFGSAKEAEEVLLPLTRWLPEASKRRGLSDEYWARRRARLGGLQTVESRQGGEGSAAGGTRALLKEAGRVGLTASTAWMARMKAAVSERVVGLTRGLEELGRALGSITCGKSTLIELSFEGGKEEEEAKDGKSMSIDDPTVLALTELERELKGRGQVGGNGGDDDPMARIEDILGDRNAAYFQQRLDLYMRGGLSGMDLYRALKRLCLANEMRLDLVMRQLREESLRGDERWRSQNERLGALLRIHEGQRKIIW 1034
BLAST of EWM23346.1 vs. NCBI_GenBank
Match: gi|553194530|ref|XP_005855980.1| (hypothetical protein NGA_0524500 [Nannochloropsis gaditana CCMP526] >gi|422293088|gb|EKU20389.1| hypothetical protein NGA_0524500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1686.39 bits (4366), Expect = 0.000e+0 Identity = 856/860 (99.53%), Postives = 857/860 (99.65%), Query Frame = 0 Query: 175 MGLGPKNETRSTRTGPQAGRGGNEGTESISGPGHKQTGGLMGQNKAKKKGNEAASLRRGSAGGGVKKTMKAFADGWSVSAGAWAARAKASGLGAWSGLRSKVSTLLPKSMERIGARMKKKRKGAAGRGRPGSARSPREQMAEQRKKRQAGKPADSGARSGVNLKSFLLPSLLQRIDPSAYSAGVWRQTVFPGQGERGRPGREEGPDAVDLEPPSGRPPVFDDLVEFPRGPAEAWDLFVGDARHLADSIYRLLAPAAALPKAGPSRPQVGARPKAARVKQGPLYATPLVLRQKKAKAAVAASASTAWPQVSGPGGEGDTEREKMELEALDWADHGVDMEKEEQGDAESEVWQGLRGRVREMIEESAGAPSGAEYYAMEGAGSEPREQETGAGRSTPSSRPGEERQERRPSRARNLPVPLRAPRLVDRLDERPRGIAAAGSSLPVTPAAASETFSDERIMDARVALPPFPSRPPMEDEYWPVPASSAFHASSAFDEEEEMGEGRAEEDGEDLDDTAVAPWRRGLPEWLKRVSLTRLLVRKPTPERMLEVIRRRQQVRRMPRKMDDAFLRTVSRKLQGNRLRIRSFQLQTDRYRNSLLSAGAYVDAVVSLFGSAKEAEEVLLPLTRWLPEASKRRGLSDEYWARRRARLGGLQTVESRQGGEGSAAGGTRALLKEAGRVGLTASTAWMARMKAAVSERVVGLTRGLEELGRALGSITCGKSTLIELSFEGGKEEEEAKDGKSMSIDDPTVLALTELERELKGRGQVGGNGGDDDPMARIEDILGDRNAAYFQQRLDLYMRGGLSGMDLYRALKRLCLANEMRLDLVMRQLREESLRGDERWRSQNERLGALLRIHEGQRKIIW 1034 MGLGPKNETRSTRTGPQAGR GNEGTESISGPGHKQTGGLMGQNKAK+KGNEAASLRRGSAGG VKKTMKAFADGWSVSAGAWAARAKASGLGAWSGLRSKVSTLLPKSMERIGARMKKKRKGAAGRGRPGSARSPREQMAEQRKKRQAGKPADSGARSGVNLKSFLLPSLLQRIDPSAYSAGVWRQTVFPGQGERGRPGREEGPDAVDLEPPSGRPPVFDDLVEFPRGPAEAWDLFVGDARHLADSIYRLLAPAAALPKAGPSRPQVGARPKAARVKQGPLYATPLVLRQKKAKAAVAASASTAWPQVSGPGGEGDTEREKMELEALDWADHGVDMEKEEQGDAESEVWQGLRGRVREMIEESAGAPSGAEYYAMEGAGSEPREQETGAGRSTPSSRPGEERQERRPSRARNLPVPLRAPRLVDRLDERPRGIAAAGSSLPVTPAAASETFSDERIMDARV LPPFPSRPPMEDEYWPVPASSAFHASSAFDEEEEMGEGRAEEDGEDLDDTAVAPWRRGLPEWLKRVSLTRLLVRKPTPERMLEVIRRRQQVRRMPRKMDDAFLRTVSRKLQGNRLRIRSFQLQTDRYRNSLLSAGAYVDAVVSLFGSAKEAEEVLLPLTRWLPEASKRRGLSDEYWARRRARLGGLQTVESRQGGEGSAAGGTRALLKEAGRVGLTASTAWMARMKAAVSERVVGLTRGLEELGRALGSITCGKSTLIELSFEGGKEEEEAKDGKSMSIDDPTVLALTELERELKGRGQVGGNGGDDDPMARIEDILGDRNAAYFQQRLDLYMRGGLSGMDLYRALKRLCLANEMRLDLVMRQLREESLRGDERWRSQNERLGALLRIHEGQRKIIW Sbjct: 1 MGLGPKNETRSTRTGPQAGREGNEGTESISGPGHKQTGGLMGQNKAKEKGNEAASLRRGSAGG-VKKTMKAFADGWSVSAGAWAARAKASGLGAWSGLRSKVSTLLPKSMERIGARMKKKRKGAAGRGRPGSARSPREQMAEQRKKRQAGKPADSGARSGVNLKSFLLPSLLQRIDPSAYSAGVWRQTVFPGQGERGRPGREEGPDAVDLEPPSGRPPVFDDLVEFPRGPAEAWDLFVGDARHLADSIYRLLAPAAALPKAGPSRPQVGARPKAARVKQGPLYATPLVLRQKKAKAAVAASASTAWPQVSGPGGEGDTEREKMELEALDWADHGVDMEKEEQGDAESEVWQGLRGRVREMIEESAGAPSGAEYYAMEGAGSEPREQETGAGRSTPSSRPGEERQERRPSRARNLPVPLRAPRLVDRLDERPRGIAAAGSSLPVTPAAASETFSDERIMDARVPLPPFPSRPPMEDEYWPVPASSAFHASSAFDEEEEMGEGRAEEDGEDLDDTAVAPWRRGLPEWLKRVSLTRLLVRKPTPERMLEVIRRRQQVRRMPRKMDDAFLRTVSRKLQGNRLRIRSFQLQTDRYRNSLLSAGAYVDAVVSLFGSAKEAEEVLLPLTRWLPEASKRRGLSDEYWARRRARLGGLQTVESRQGGEGSAAGGTRALLKEAGRVGLTASTAWMARMKAAVSERVVGLTRGLEELGRALGSITCGKSTLIELSFEGGKEEEEAKDGKSMSIDDPTVLALTELERELKGRGQVGGNGGDDDPMARIEDILGDRNAAYFQQRLDLYMRGGLSGMDLYRALKRLCLANEMRLDLVMRQLREESLRGDERWRSQNERLGALLRIHEGQRKIIW 859
BLAST of EWM23346.1 vs. NCBI_GenBank
Match: gi|298714078|emb|CBJ33841.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 70.4774 bits (171), Expect = 1.593e-8 Identity = 44/107 (41.12%), Postives = 58/107 (54.21%), Query Frame = 0 Query: 733 RKMDDAFLRTVSRKLQGNRLRIRSFQLQTDRYRNSLLSAGAYVDAVVSLFGSAKEAEEVLLPLTRWLPEASKRRGLSDEYWARRRARLGGLQTVESRQGGEGSAAGG 839 + MDD+FL+ VS L+ N+ +I+ FQ TDR+R L+ A Y V LFG EE++ PL LPE KR+ L Y +RA+ G ES GG S GG Sbjct: 785 KTMDDSFLKKVSVMLRRNQSKIKKFQQLTDRFRGGLIKAPVYYAGVEELFGE-DNVEEIIGPLLAALPENDKRKTLQAVYSKAQRAKNG---EGESDGGGIASLFGG 887 The following BLAST results are available for this feature:
BLAST of EWM23346.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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