EWM23359.1, cds7326 (CDS) Nannochloropsis gaditana

Overview
NameEWM23359.1
Unique Namecds7326
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:374856..374928 +
Alignment locationCM002471.1:375215..375528 +
Alignment locationCM002471.1:375842..375959 +
Alignment locationCM002471.1:376050..376216 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23359.1
ProductTransmembrane adaptor Erv26
Orig transcript idgnl|cribi|Naga_100057g5.3918.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:374856..374928 +
CM002471.1supercontigCM002471.1:375215..375528 +
CM002471.1supercontigCM002471.1:375842..375959 +
CM002471.1supercontigCM002471.1:376050..376216 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR007277Transmembrane_adaptor_Erv26
Homology
BLAST of EWM23359.1 vs. NCBI_GenBank
Match: gi|585104367|gb|EWM23359.1| (Transmembrane adaptor Erv26 [Nannochloropsis gaditana])

HSP 1 Score: 451.825 bits (1161), Expect = 1.070e-160
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0
Query:    1 MGYVLAAVGYIAGYMAILFQTICIACGLYYAAELAEEYASATKRMIMWSISAVVGVHVLLYFESFPLLVLLGGIACHGAYAWLLMDFPKVEIFSYKFLLGLVALCADHYIWFQYLHGRPSIVPSALTSIAIFFLLVWFVPFAIFVSLSVNDNVLPSMTSSPQYSSSSSDAMYYSDYSSTRSLSMSDSGSYSKGTSRNTSKKGGIRGMLDTLNAHIAPGIAKNV 223
            MGYVLAAVGYIAGYMAILFQTICIACGLYYAAELAEEYASATKRMIMWSISAVVGVHVLLYFESFPLLVLLGGIACHGAYAWLLMDFPKVEIFSYKFLLGLVALCADHYIWFQYLHGRPSIVPSALTSIAIFFLLVWFVPFAIFVSLSVNDNVLPSMTSSPQYSSSSSDAMYYSDYSSTRSLSMSDSGSYSKGTSRNTSKKGGIRGMLDTLNAHIAPGIAKNV
Sbjct:    1 MGYVLAAVGYIAGYMAILFQTICIACGLYYAAELAEEYASATKRMIMWSISAVVGVHVLLYFESFPLLVLLGGIACHGAYAWLLMDFPKVEIFSYKFLLGLVALCADHYIWFQYLHGRPSIVPSALTSIAIFFLLVWFVPFAIFVSLSVNDNVLPSMTSSPQYSSSSSDAMYYSDYSSTRSLSMSDSGSYSKGTSRNTSKKGGIRGMLDTLNAHIAPGIAKNV 223          
BLAST of EWM23359.1 vs. NCBI_GenBank
Match: gi|553194536|ref|XP_005855982.1| (hypothetical protein NGA_0524700 [Nannochloropsis gaditana CCMP526] >gi|422293090|gb|EKU20391.1| hypothetical protein NGA_0524700 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 261.151 bits (666), Expect = 1.219e-86
Identity = 128/129 (99.22%), Postives = 128/129 (99.22%), Query Frame = 0
Query:    1 MGYVLAAVGYIAGYMAILFQTICIACGLYYAAELAEEYASATKRMIMWSISAVVGVHVLLYFESFPLLVLLGGIACHGAYAWLLMDFPKVEIFSYKFLLGLVALCADHYIWFQYLHGRPSIVPSALTSI 129
            MGYVLAAVGYIAGYMAILFQTICIACGLYYAAELAEEYASATKRMIMWSISAVVGVHVLLYFESFPLLVLLGGIACHGAY WLLMDFPKVEIFSYKFLLGLVALCADHYIWFQYLHGRPSIVPSALTSI
Sbjct:    1 MGYVLAAVGYIAGYMAILFQTICIACGLYYAAELAEEYASATKRMIMWSISAVVGVHVLLYFESFPLLVLLGGIACHGAYTWLLMDFPKVEIFSYKFLLGLVALCADHYIWFQYLHGRPSIVPSALTSI 129          
BLAST of EWM23359.1 vs. NCBI_GenBank
Match: gi|676379187|ref|XP_009032872.1| (hypothetical protein AURANDRAFT_6594, partial [Aureococcus anophagefferens] >gi|323455927|gb|EGB11794.1| hypothetical protein AURANDRAFT_6594, partial [Aureococcus anophagefferens])

HSP 1 Score: 140.198 bits (352), Expect = 8.304e-39
Identity = 67/146 (45.89%), Postives = 98/146 (67.12%), Query Frame = 0
Query:   11 IAGYMAILFQTICIACGLYYAAELAEEYASATKRMIMWSISAVVGVHVLLYFESFPLLVLLGGIACHGAYAWLLMDFPKVEIFSYKFLLGLVALCADHYIWFQYLHGRPSIVP-SALTSIAIFFLLVWFVPFAIFVSLSVNDNVLP 155
            + GY+A+   T+C++CGLYYAAELAEE++  T R++ ++  AVV  H +L+ + +PL  +  G+ACH  YAWLL D+P++E+ S  FL  + A    HY WFQ+L    S+ P   + S+  F L VW VPF++F+SLS+NDN LP
Sbjct:    4 LGGYLAVFGATLCLSCGLYYAAELAEEHSVLTGRLLGYATRAVVAAHAVLWLDGYPLRRVAAGVACHACYAWLLNDYPRLELSSPAFLASVAAFLGGHYSWFQHL-ADLSVEPLPFINSLGFFTLFVWLVPFSLFISLSINDNALP 148          
BLAST of EWM23359.1 vs. NCBI_GenBank
Match: gi|758364989|emb|CEP12590.1| (hypothetical protein [Parasitella parasitica])

HSP 1 Score: 124.405 bits (311), Expect = 1.922e-31
Identity = 72/167 (43.11%), Postives = 96/167 (57.49%), Query Frame = 0
Query:    1 MGYVLAAVGYIAGYMAILFQTICIACGLYYAAELAEEYASATKRMIMWSISAVVGVHVLLY-FESFPLLVLLGGIACHGAYAWLLMDFPKVEIFSYKFLLGLVALCADHYIWFQYL--HGRPSIVPSALTSIAIFF-LLVWFVPFAIFVSLSVNDNVLPSMTSSPQY 163
            M  VL  V Y+A  +A  F  + +ACGLYY AEL EEY+  TK++I W  + ++ +HVL + F+  P   L   I CH  Y+  L +FP + + S +FL   V + ADH++WF Y   H +P         IA FF L VW VPFA F+SLS NDN LP  TS P +
Sbjct:    1 MPSVLHLVAYVATGLAFCFVVLSLACGLYYLAELVEEYSVYTKKVIKWMTACIISLHVLFWIFDGLPFFHLAFSIFCHCVYSLNLKNFPFISLSSIQFLSSCVLVFADHFLWFNYFTKHYKP------FMDIAAFFGLCVWLVPFAYFISLSANDNALP--TSDPAF 159          
BLAST of EWM23359.1 vs. NCBI_GenBank
Match: gi|595439614|gb|EXX52911.1| (Svp26p [Rhizophagus irregularis DAOM 197198w])

HSP 1 Score: 122.479 bits (306), Expect = 3.700e-31
Identity = 68/155 (43.87%), Postives = 92/155 (59.35%), Query Frame = 0
Query:    4 VLAAVGYIAGYMAILFQTICIACGLYYAAELAEEYASATKRMIMWSISAVVGVHVLLY-FESFPLLVLLGGIACHGAYAWLLMDFPKVEIFSYKFLLGLVALCADHYIWFQYLHGRPSIVPSALTSIAIFF-LLVWFVPFAIFVSLSVNDNVLPS 156
            +L  + Y A  +A LF T+ +ACGLYY AEL EEY   T+++I      VV +HVLL+ F+SFP   +L  I CHG Y   L  FP + + S  F+   V + ADH++WFQY   R  +       +A FF + VW +PF+ F+SLS NDN LPS
Sbjct:    3 LLHLLSYGAAVLAFLFLTLSLACGLYYLAELVEEYTVLTRKIIKNVTLMVVVIHVLLWLFDSFPFWRILFSIMCHGVYTMNLETFPFINLTSLPFIASCVLVIADHFLWFQYFTSRYFV----FVDVAAFFGICVWLIPFSYFISLSANDNALPS 153          
BLAST of EWM23359.1 vs. NCBI_GenBank
Match: gi|693498183|emb|CEF99403.1| (Transmembrane adaptor Erv26 [Ostreococcus tauri])

HSP 1 Score: 122.094 bits (305), Expect = 9.401e-31
Identity = 75/213 (35.21%), Postives = 113/213 (53.05%), Query Frame = 0
Query:    1 MGYVLAAVGYIAGYMAILFQTICIACGLYYAAELAEEYASATKRMIMWSISAVVGVH-VLLYFESFPLLVLLGGIACHGAYAWLLMDFPKVEIFSYKFLLGLVALCADHYIWFQYLHGRPSIVPSALTSIAIFFLLVWFVPFAIFVSLSVNDNVLPSMTSSPQYSSSSSDAMYYSDY---SSTRSLSMSDSGSYSKGTSRNTSK---KGGIRG 206
            M +V  A+ YI GY+ ++F  +C+A GLYY AE+ EEY   TKR++ +SI A  G+H +LL F+  P   L        AY+ +L  FP ++  S +FL  L AL A H++W ++ HG      S    +  FF++VWFVPF  F+S++ N++VLP   + P      +   Y  +      TR+  +    +     +R T K   KGGI G
Sbjct:    1 MEFVSDALVYIGGYLFLVFVAVCLATGLYYLAEMVEEYTRLTKRVLDYSIKASYGLHALLLVFDRLPFFTLAISAGSQFAYSRMLRRFPFIDFTSVEFLGSLAALAASHWVWVRHFHG---TYHSTEYVLGFFFMIVWFVPFGFFISIAANESVLPGGATVPGAPQGGNLGGYDPNRGGGKKTRNALLMLLDTLKMYWARFTEKIMPKGGIPG 210          
BLAST of EWM23359.1 vs. NCBI_GenBank
Match: gi|1069960681|ref|XP_018287743.1| (hypothetical protein PHYBLDRAFT_135767 [Phycomyces blakesleeanus NRRL 1555(-)] >gi|1026585064|gb|OAD69703.1| hypothetical protein PHYBLDRAFT_135767 [Phycomyces blakesleeanus NRRL 1555(-)])

HSP 1 Score: 121.324 bits (303), Expect = 2.118e-30
Identity = 80/236 (33.90%), Postives = 113/236 (47.88%), Query Frame = 0
Query:    4 VLAAVGYIAGYMAILFQTICIACGLYYAAELAEEYASATKRMIMWSISAVVGVHVLLYFESFPLLVLLGGIACHGAYAWLLMDFPKVEIFSYKFLLGLVALCADHYIWFQYL--HGRPSIVPSALTSIAIFF-LLVWFVPFAIFVSLSVNDNVLP-SMTSSPQYSSSSSDAMYYSD-------------YSSTRSLSMSDSGSYSKGTSRNTSKKGGIRGMLDTLNAHIAPGIAKN 222
            +L  VGY A  +A  F  + +ACGLYY AEL EEY   TK++I     AV  VHVLL F+  P L +   + CHG Y+  L  FP + + S  FL   V +  DH++WF+Y   H RP         IA FF + VW +PF  F+SLS NDN LP S  ++  ++ S +                    + +T++   S + SY+ G S          GM   + +H  P +   
Sbjct:    3 ILHLVGYCAIALAFCFFVLSLACGLYYLAELVEEYTVYTKKVIKAMTVAVAAVHVLLLFDRLPFLQIAFSLFCHGVYSMNLKTFPFINLTSLPFLSSCVLVFVDHFVWFRYFTKHYRP------FMDIAAFFGICVWLIPFTYFISLSANDNSLPMSDPTAGDFAPSQNKKGLLKTLLRFVGIKGQEPVFPTTQTFEPSSASSYTPGPS---------VGMASAVRSHYIPNMQNR 223          
BLAST of EWM23359.1 vs. NCBI_GenBank
Match: gi|1183485037|gb|ORZ08785.1| (transmembrane adaptor Erv26-domain-containing protein [Lobosporangium transversale])

HSP 1 Score: 122.865 bits (307), Expect = 3.077e-30
Identity = 68/172 (39.53%), Postives = 94/172 (54.65%), Query Frame = 0
Query:    2 GYVLAAVGYIAGYMAILFQTICIACGLYYAAELAEEYASATKRMIMWSISAVVGVHVLLY-FESFPLLVLLGGIACHGAYAWLLMDFPKVEIFSYKFLLGLVALCADHYIWFQYLHGRPSIVPSALTSIAIFF-LLVWFVPFAIFVSLSVNDNVLPSMTSSPQYSSSSSDAM 171
            G+    + +    +A LF T+ +ACGLYY AEL EEY   TK++I      VV +H+ L+  +  P   +L  + CH  Y++ L +FP + + S  FLL  V +  DH++WFQY     S       SIA FF + VW VPFA F+SLS NDN LPS   S Q S    + +
Sbjct:    4 GFTFTLISFAGAVLAFLFTTLSLACGLYYMAELVEEYTVWTKKIIKGLTMVVVVLHISLWLLDGLPFTKILFSLGCHAVYSFNLTNFPFISLTSVPFLLSCVLVLVDHFMWFQYF----SRHYHTFASIASFFGICVWMVPFAYFISLSANDNALPSFDKSQQDSKQKKNGI 171          
BLAST of EWM23359.1 vs. NCBI_GenBank
Match: gi|551665027|ref|XP_005835276.1| (hypothetical protein GUITHDRAFT_86075 [Guillardia theta CCMP2712] >gi|428179425|gb|EKX48296.1| hypothetical protein GUITHDRAFT_86075 [Guillardia theta CCMP2712])

HSP 1 Score: 119.013 bits (297), Expect = 8.090e-30
Identity = 75/192 (39.06%), Postives = 103/192 (53.65%), Query Frame = 0
Query:   10 YIAGYMAILFQTICIACGLYYAAELAEEYASATKRMIMWSISAVVGVH-VLLYFESFPLLVLLGGIACHGAYAWLLMDFPKVEIFSYKFLLGLVALCADHYIWF-----QYLHGRPSIVPSALTSIAIFFLLVWFVPFAIFVSLSVNDNVLPSMTSS-----PQYSSSSSDAM--YYSDYSSTRSLSMSDSG 188
            Y +GY+ +LF  IC+ACGLYY AELAEEY+  TK+++ +SI  V+ +H +LL  + FP    + GIA H  Y   L DFP V   S  FL     L  +H++W      QY +  P I       +A F   VW VPF  FVS+S+ D VLPS T S      Q   + + A+      + S R + MS++G
Sbjct:    8 YASGYLVLLFLAICMACGLYYMAELAEEYSRLTKKVLKYSIWVVLAIHGLLLVLDGFPFFTTMFGIALHVVYYQFLKDFPFVNFSSPLFLGACAGLLVNHWLWIVYFREQYQYRVPQI-------MAFFVPCVWLVPFGFFVSVSLGDTVLPSATHSGGLGVKQEGQNKASALKGLLQWFGSKRDIFMSNTG 192          
BLAST of EWM23359.1 vs. NCBI_GenBank
Match: gi|1032647498|gb|OAQ28798.1| (DUF396-domain-containing protein [Mortierella elongata AG-77])

HSP 1 Score: 120.553 bits (301), Expect = 2.579e-29
Identity = 66/163 (40.49%), Postives = 94/163 (57.67%), Query Frame = 0
Query:    2 GYVLAAVGYIAGYMAILFQTICIACGLYYAAELAEEYASATKRMIMWSISAVVGVHVLLYF-ESFPLLVLLGGIACHGAYAWLLMDFPKVEIFSYKFLLGLVALCADHYIWFQYLHGRPSIVPSALTSIAIFF-LLVWFVPFAIFVSLSVNDNVLPSMTSSPQ 162
            G  L  + YI   +A +F T+ +ACGLYY AEL EEY   TK++I      VVG+H++L+  +  P   +L  +ACH  Y+  L +FP + + S  FL  +V +  DH++WF+Y   +      +  SIA FF + VW VPF  F+SLS NDN LPS   + Q
Sbjct:    4 GVTLLLISYIGTAIAFVFATLSLACGLYYLAELVEEYTVLTKKIIKGLTLGVVGLHLMLWIVDGLPFTKILFSLACHAVYSTNLSNFPYISLVSIPFLSSVVLVLVDHFMWFKYFANK----YYSFMSIASFFGICVWLVPFTYFISLSANDNALPSFDQNQQ 162          
The following BLAST results are available for this feature:
BLAST of EWM23359.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104367|gb|EWM23359.1|1.070e-160100.00Transmembrane adaptor Erv26 [Nannochloropsis gadit... [more]
gi|553194536|ref|XP_005855982.1|1.219e-8699.22hypothetical protein NGA_0524700 [Nannochloropsis ... [more]
gi|676379187|ref|XP_009032872.1|8.304e-3945.89hypothetical protein AURANDRAFT_6594, partial [Aur... [more]
gi|758364989|emb|CEP12590.1|1.922e-3143.11hypothetical protein [Parasitella parasitica][more]
gi|595439614|gb|EXX52911.1|3.700e-3143.87Svp26p [Rhizophagus irregularis DAOM 197198w][more]
gi|693498183|emb|CEF99403.1|9.401e-3135.21Transmembrane adaptor Erv26 [Ostreococcus tauri][more]
gi|1069960681|ref|XP_018287743.1|2.118e-3033.90hypothetical protein PHYBLDRAFT_135767 [Phycomyces... [more]
gi|1183485037|gb|ORZ08785.1|3.077e-3039.53transmembrane adaptor Erv26-domain-containing prot... [more]
gi|551665027|ref|XP_005835276.1|8.090e-3039.06hypothetical protein GUITHDRAFT_86075 [Guillardia ... [more]
gi|1032647498|gb|OAQ28798.1|2.579e-2940.49DUF396-domain-containing protein [Mortierella elon... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7343rna7343Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications