EWM23362.1, cds7322 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23362.1 vs. NCBI_GenBank
Match: gi|585104370|gb|EWM23362.1| (hypothetical protein Naga_100057g11 [Nannochloropsis gaditana]) HSP 1 Score: 894.034 bits (2309), Expect = 0.000e+0 Identity = 444/444 (100.00%), Postives = 444/444 (100.00%), Query Frame = 0
Query: 1 MGEVTTPSTPRPFLGTLSGDTLLTVLQFLEVADGTRVCLVCPYLNKSVCEHDEVLFKAHVLNEQLVSLPTPVTLKQKVRAAQTLQTALALKGGWRGLSYVTRHVTGRPCLGYFRQIPRDFRSDFRGKLFRVRLEDTEVSDMAWAPEGLPRGREGRGLVLEEVTFSCTHEVVKALRLYRAPGQSGSCLGGVCDGEPLVKWTARVEPKGRGRSREDRAADTQVCFEVFHSRVGALHPLAPCLSLSASGGQLREFEDLQGLWRGVYGSHGWEIIQVRLRRLWTDGSAGTSPSIGGRVILEGLKLVGDANVPANEWTFRADVTAPPLDRAEALGADTRPIYSLTTRMVPQSWVLAEEAGRIRAVYRGKGQVNMVPGIWEPQEVGVDVMLLRREENGGRGGIWLLWHDEGFSSRHCIELTRLIEGEEAGEGEGRAFVEGLEATSGSESD 444
MGEVTTPSTPRPFLGTLSGDTLLTVLQFLEVADGTRVCLVCPYLNKSVCEHDEVLFKAHVLNEQLVSLPTPVTLKQKVRAAQTLQTALALKGGWRGLSYVTRHVTGRPCLGYFRQIPRDFRSDFRGKLFRVRLEDTEVSDMAWAPEGLPRGREGRGLVLEEVTFSCTHEVVKALRLYRAPGQSGSCLGGVCDGEPLVKWTARVEPKGRGRSREDRAADTQVCFEVFHSRVGALHPLAPCLSLSASGGQLREFEDLQGLWRGVYGSHGWEIIQVRLRRLWTDGSAGTSPSIGGRVILEGLKLVGDANVPANEWTFRADVTAPPLDRAEALGADTRPIYSLTTRMVPQSWVLAEEAGRIRAVYRGKGQVNMVPGIWEPQEVGVDVMLLRREENGGRGGIWLLWHDEGFSSRHCIELTRLIEGEEAGEGEGRAFVEGLEATSGSESD
Sbjct: 1 MGEVTTPSTPRPFLGTLSGDTLLTVLQFLEVADGTRVCLVCPYLNKSVCEHDEVLFKAHVLNEQLVSLPTPVTLKQKVRAAQTLQTALALKGGWRGLSYVTRHVTGRPCLGYFRQIPRDFRSDFRGKLFRVRLEDTEVSDMAWAPEGLPRGREGRGLVLEEVTFSCTHEVVKALRLYRAPGQSGSCLGGVCDGEPLVKWTARVEPKGRGRSREDRAADTQVCFEVFHSRVGALHPLAPCLSLSASGGQLREFEDLQGLWRGVYGSHGWEIIQVRLRRLWTDGSAGTSPSIGGRVILEGLKLVGDANVPANEWTFRADVTAPPLDRAEALGADTRPIYSLTTRMVPQSWVLAEEAGRIRAVYRGKGQVNMVPGIWEPQEVGVDVMLLRREENGGRGGIWLLWHDEGFSSRHCIELTRLIEGEEAGEGEGRAFVEGLEATSGSESD 444
BLAST of EWM23362.1 vs. NCBI_GenBank
Match: gi|760444759|ref|XP_011399448.1| (hypothetical protein F751_2097 [Auxenochlorella protothecoides] >gi|675354070|gb|KFM26510.1| hypothetical protein F751_2097 [Auxenochlorella protothecoides]) HSP 1 Score: 64.3142 bits (155), Expect = 1.613e-7 Identity = 58/182 (31.87%), Postives = 84/182 (46.15%), Query Frame = 0
Query: 255 LQGLWRGVYGSHGWEIIQVRLRRLWTDGSAGTSPSIGGR--VILEGLKLVGDANVPANEWTFRADV---TAPPLDRA---EALGADTRPIYSLTTRMVPQSWVLAEEAGRIRAVYRGKGQVNMVPGI----------WEPQEV-GVDVMLLRREENGGRGGIWLLWHDEGFSSRHCIELTRL 417
+QGL G Y +HG E++ +RL G + PS G V LE LKL+GD NVP + +F D A P + + D+RPIYS +S V+ E I A +R GQ+N G+ W+P+ V V V+ + + + +++ DE RH IE T L
Sbjct: 225 MQGLVTGAYSTHGTEVLSLRL-----CGPSSAPPSDSGVTGVRLEALKLIGDVNVPGGQLSFVVDAESGVAGPTRHSRLHDFAAEDSRPIYSFADG---RSAVVDVERLPICAQFRALGQINEFEGVLVEVEGRGGLWQPEWVPAVFVVYSQAQPHPAGHSCAIVFCDEDRPYRHIIEFTPL 398 The following BLAST results are available for this feature:
BLAST of EWM23362.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|