EWM23369.1, cds7318 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23369.1 vs. NCBI_GenBank
Match: gi|585104377|gb|EWM23369.1| (protein tyrosine phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 591.267 bits (1523), Expect = 0.000e+0 Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0 Query: 1 MPHTWSDLPFSHLFSPVRGLLWLFFLAGLPALGSSYNLLLPAGWTPRGRCTRSLHMSNLDPAPASAAKSVLFVCLGNICRSPTAEAVFKSVVEREGKSSHIHIDSCGTGGGNPGWYQKGGWSYHEGDMADSRMRAAASKRGIDITSRSRPLKAEDIDFFDFLICMDGANKSAVMEAADYWGKTQTAAKKIRLMTEYCTINKGARTVPDPYYGGADGFEKVLDLLQDACDVSKLQVVQKCGYSPIASSNCLCAFVLRTSLVRFCSFHVYESSIICAAVPYVTTAH 284 MPHTWSDLPFSHLFSPVRGLLWLFFLAGLPALGSSYNLLLPAGWTPRGRCTRSLHMSNLDPAPASAAKSVLFVCLGNICRSPTAEAVFKSVVEREGKSSHIHIDSCGTGGGNPGWYQKGGWSYHEGDMADSRMRAAASKRGIDITSRSRPLKAEDIDFFDFLICMDGANKSAVMEAADYWGKTQTAAKKIRLMTEYCTINKGARTVPDPYYGGADGFEKVLDLLQDACDVSKLQVVQKCGYSPIASSNCLCAFVLRTSLVRFCSFHVYESSIICAAVPYVTTAH Sbjct: 1 MPHTWSDLPFSHLFSPVRGLLWLFFLAGLPALGSSYNLLLPAGWTPRGRCTRSLHMSNLDPAPASAAKSVLFVCLGNICRSPTAEAVFKSVVEREGKSSHIHIDSCGTGGGNPGWYQKGGWSYHEGDMADSRMRAAASKRGIDITSRSRPLKAEDIDFFDFLICMDGANKSAVMEAADYWGKTQTAAKKIRLMTEYCTINKGARTVPDPYYGGADGFEKVLDLLQDACDVSKLQVVQKCGYSPIASSNCLCAFVLRTSLVRFCSFHVYESSIICAAVPYVTTAH 284
BLAST of EWM23369.1 vs. NCBI_GenBank
Match: gi|299116693|emb|CBN74838.1| (Protein tyrosine phosphatase [Ectocarpus siliculosus]) HSP 1 Score: 211.46 bits (537), Expect = 2.248e-64 Identity = 98/170 (57.65%), Postives = 120/170 (70.59%), Query Frame = 0 Query: 70 VLFVCLGNICRSPTAEAVFKSVVEREGKSSHIHIDSCGTGGGNPGWYQKGGWSYHEGDMADSRMRAAASKRGIDITSRSRPLKAEDIDFFDFLICMDGANKSAVMEAADYWGKTQTAAKKIRLMTEYCTINKGARTVPDPYYGGADGFEKVLDLLQDACDVSKLQVVQKC 239 VLFVCLGNICRSPTAEAVFK V + G + IDSCGTGGGNP WY++GG SYH GD D+RM AAA+KRG+ ++ SRPL D D FD ++ MD AN A+ AA++WGK+Q A K+R MT YC + ++VPDPYYGG GFE VLDLL DAC +++KC Sbjct: 82 VLFVCLGNICRSPTAEAVFKQVTSKAGDADKFEIDSCGTGGGNPSWYKEGGESYHTGDSPDARMTAAAAKRGVMLSGASRPLTPGDFDKFDLVVGMDAANTKAMSTAAEHWGKSQEAISKLRTMTSYCRSSGDVKSVPDPYYGGPQGFETVLDLLDDACQ----GLLEKC 247
BLAST of EWM23369.1 vs. NCBI_GenBank
Match: gi|695383646|ref|XP_009517773.1| (hypothetical protein PHYSODRAFT_471431 [Phytophthora sojae] >gi|348690684|gb|EGZ30498.1| hypothetical protein PHYSODRAFT_471431 [Phytophthora sojae]) HSP 1 Score: 205.297 bits (521), Expect = 4.972e-63 Identity = 102/166 (61.45%), Postives = 119/166 (71.69%), Query Frame = 0 Query: 69 SVLFVCLGNICRSPTAEAVFKSVVEREG--KSSHIHIDSCGTGGGNPGWYQKGGWSYHEGDMADSRMRAAASKRGIDITSRSRPLKAEDIDFFDFLICMDGANKSAVMEAADYWGKT---QTAAKKIRLMTEYCTINKGARTVPDPYYGGADGFEKVLDLLQDACD 229 SVLFVCLGNICRSP EAV K +V ++ +S HIDSCGTGGGNP WY GGWSYHEGD ADSRM A KRG +TSRSRPL +DID FD++ICM+ NK+AV+EAA+ WG A +KI +MT YC K A VPDP+Y G GF+ VLDLL+DACD Sbjct: 3 SVLFVCLGNICRSPAGEAVLKGIVAKKAGADASSFHIDSCGTGGGNPNWYGAGGWSYHEGDAADSRMTKEAKKRGYAMTSRSRPLNKQDIDEFDYIICMEDKNKTAVLEAAEAWGGAPCRDLAKQKISMMTNYCKTFKDATRVPDPWYEG--GFDHVLDLLEDACD 166
BLAST of EWM23369.1 vs. NCBI_GenBank
Match: gi|1214713078|gb|OWZ23986.1| (Protein tyrosine phosphatase [Phytophthora megakarya]) HSP 1 Score: 204.142 bits (518), Expect = 1.310e-62 Identity = 105/174 (60.34%), Postives = 121/174 (69.54%), Query Frame = 0 Query: 69 SVLFVCLGNICRSPTAEAVFKSVVEREGKSSHI-HIDSCGTGGGNPGWYQKGGWSYHEGDMADSRMRAAASKRGIDITSRSRPLKAEDIDFFDFLICMDGANKSAVMEAADYWGKT---QTAAKKIRLMTEYCTINKGARTVPDPYYGGADGFEKVLDLLQDACDVSKLQVVQK 238 SVLFVCLGNICRSP EAV K +V + S I IDSCGTGGGNP WY GGWSYHEGD ADSRM A KRG +TSRSRPL +DID FDF+ICM+ NK+AV+EAA+ WG A +KI +MT+YC K A VPDP+Y G GF+ VLDLL+DACD +V K Sbjct: 3 SVLFVCLGNICRSPAGEAVLKGIVTKNAASDLIPTIDSCGTGGGNPNWYGAGGWSYHEGDAADSRMTKEAKKRGYVMTSRSRPLTQKDIDEFDFIICMESKNKAAVLEAAEAWGGASCRDLADQKISMMTDYCKFFKDANRVPDPWYEG--GFDHVLDLLEDACDGLYELIVNK 174
BLAST of EWM23369.1 vs. NCBI_GenBank
Match: gi|1173945388|gb|OQR94018.1| (hypothetical protein THRCLA_08273 [Thraustotheca clavata]) HSP 1 Score: 203.371 bits (516), Expect = 2.306e-62 Identity = 98/162 (60.49%), Postives = 117/162 (72.22%), Query Frame = 0 Query: 70 VLFVCLGNICRSPTAEAVFKSVVEREGKSSHIHIDSCGTGGGNPGWYQKGGWSYHEGDMADSRMRAAASKRGIDITSRSRPLKAEDIDFFDFLICMDGANKSAVMEAADYWGK--TQTAAKKIRLMTEYCTINKGARTVPDPYYGGADGFEKVLDLLQDACD 229 VLFVCLGNICRSP AE VFK+VV ++ S+ IDSCGTGGG GWY+ GWSYHEGD ADSRM+ A KRG +TS+SRPL ED+ FD +ICMD N AV+EAA +WG Q A K+ M +YC +NKGA VPDP+Y G GF+ VLDLL+DAC+ Sbjct: 5 VLFVCLGNICRSPAAEGVFKAVVAKDNASAKYDIDSCGTGGGASGWYKPNGWSYHEGDSADSRMKKEAKKRGYHLTSKSRPLNPEDLHRFDHIICMDNNNVQAVLEAARFWGAEYEQLAKAKVSTMCQYCIVNKGATRVPDPWYEG--GFDTVLDLLEDACE 164
BLAST of EWM23369.1 vs. NCBI_GenBank
Match: gi|675176075|ref|XP_008896922.1| (hypothetical protein PPTG_05177 [Phytophthora parasitica INRA-310] >gi|566011489|gb|ETI34400.1| hypothetical protein F443_19064 [Phytophthora parasitica P1569] >gi|568102684|gb|ETN17355.1| hypothetical protein PPTG_05177 [Phytophthora parasitica INRA-310] >gi|570969317|gb|ETP32436.1| hypothetical protein F442_18845 [Phytophthora parasitica P10297]) HSP 1 Score: 201.445 bits (511), Expect = 3.078e-61 Identity = 99/165 (60.00%), Postives = 118/165 (71.52%), Query Frame = 0 Query: 70 VLFVCLGNICRSPTAEAVFKSVVEREG--KSSHIHIDSCGTGGGNPGWYQKGGWSYHEGDMADSRMRAAASKRGIDITSRSRPLKAEDIDFFDFLICMDGANKSAVMEAADYWGKT---QTAAKKIRLMTEYCTINKGARTVPDPYYGGADGFEKVLDLLQDACD 229 VLFVCLGNICRSP EAV K +V ++ ++ HIDSCGTGGGNP WY GGWSYHEG+ ADSRM A KRG +TSRSRPL +DID FD++ICM+ NK AV+EAA+ WG A +KI +MT+YC K A VPDP+Y G GF+ VLDLL+DACD Sbjct: 23 VLFVCLGNICRSPAGEAVLKGIVAKKAGADAASFHIDSCGTGGGNPNWYGAGGWSYHEGEAADSRMTKEAKKRGYIMTSRSRPLNKQDIDEFDYIICMEDKNKEAVLEAAEAWGGVPCRDLADQKISMMTDYCKTIKDATRVPDPWYEG--GFDHVLDLLEDACD 185
BLAST of EWM23369.1 vs. NCBI_GenBank
Match: gi|567949014|gb|ETK74749.1| (hypothetical protein L915_18488 [Phytophthora parasitica] >gi|568007190|gb|ETL81433.1| hypothetical protein L917_18216 [Phytophthora parasitica] >gi|568037032|gb|ETM34629.1| hypothetical protein L914_18301 [Phytophthora parasitica] >gi|570939042|gb|ETP04299.1| hypothetical protein F441_18872 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 201.06 bits (510), Expect = 4.601e-61 Identity = 99/165 (60.00%), Postives = 118/165 (71.52%), Query Frame = 0 Query: 70 VLFVCLGNICRSPTAEAVFKSVVEREG--KSSHIHIDSCGTGGGNPGWYQKGGWSYHEGDMADSRMRAAASKRGIDITSRSRPLKAEDIDFFDFLICMDGANKSAVMEAADYWGKT---QTAAKKIRLMTEYCTINKGARTVPDPYYGGADGFEKVLDLLQDACD 229 VLFVCLGNICRSP EAV K +V ++ ++ HIDSCGTGGGNP WY GGWSYHEG+ ADSRM A KRG +TSRSRPL +DID FD++ICM+ NK AV+EAA+ WG A +KI +MT+YC K A VPDP+Y G GF+ VLDLL+DACD Sbjct: 23 VLFVCLGNICRSPAGEAVLKGIVAKKAGADAASFHIDSCGTGGGNPNWYGVGGWSYHEGEAADSRMTKEAKKRGYIMTSRSRPLNKQDIDEFDYIICMEDKNKEAVLEAAEAWGGVPCRDLADQKISMMTDYCKTIKDATRVPDPWYEG--GFDHVLDLLEDACD 185
BLAST of EWM23369.1 vs. NCBI_GenBank
Match: gi|301119299|ref|XP_002907377.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262105889|gb|EEY63941.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 200.29 bits (508), Expect = 4.897e-61 Identity = 102/166 (61.45%), Postives = 118/166 (71.08%), Query Frame = 0 Query: 69 SVLFVCLGNICRSPTAEAVFKSVV-EREG-KSSHIHIDSCGTGGGNPGWYQKGGWSYHEGDMADSRMRAAASKRGIDITSRSRPLKAEDIDFFDFLICMDGANKSAVMEAADYWGKT---QTAAKKIRLMTEYCTINKGARTVPDPYYGGADGFEKVLDLLQDACD 229 SVLFVCLGNICRSP EAV K +V R G +S HIDSCGTGGGNP WY GGWSYHEGD ADSRM A KRG +TSRSRPL +DID D++ICM+ NK+A++EAAD WG A +KI +MT+YC K VPDP+Y G GF+ VLDLL+DACD Sbjct: 3 SVLFVCLGNICRSPAGEAVLKGIVANRAGADASSFHIDSCGTGGGNPNWYGAGGWSYHEGDAADSRMTKEAKKRGYVMTSRSRPLNKQDIDELDYIICMEDKNKAAMLEAADAWGGAPCRDLAKQKISMMTDYCKNFKDTTRVPDPWYEG--GFDHVLDLLEDACD 166
BLAST of EWM23369.1 vs. NCBI_GenBank
Match: gi|570315243|gb|ETO63191.1| (hypothetical protein F444_19016 [Phytophthora parasitica P1976]) HSP 1 Score: 199.519 bits (506), Expect = 1.952e-60 Identity = 98/165 (59.39%), Postives = 118/165 (71.52%), Query Frame = 0 Query: 70 VLFVCLGNICRSPTAEAVFKSVVEREG--KSSHIHIDSCGTGGGNPGWYQKGGWSYHEGDMADSRMRAAASKRGIDITSRSRPLKAEDIDFFDFLICMDGANKSAVMEAADYWGKT---QTAAKKIRLMTEYCTINKGARTVPDPYYGGADGFEKVLDLLQDACD 229 VLFVCLGNICRSP EAV K +V ++ ++ HIDSCGTGGGNP WY GGWSYHEG+ ADSRM A KRG +TSRSRPL +DID FD++ICM+ NK AV+EAA+ WG A +KI +MT+YC K A VPDP+Y G GF+ VLDLL+DAC+ Sbjct: 23 VLFVCLGNICRSPAGEAVLKGIVAKKAGADAASFHIDSCGTGGGNPNWYGVGGWSYHEGEAADSRMTKEAKKRGYIMTSRSRPLNKQDIDEFDYIICMEDKNKEAVLEAAEAWGGVPCRDLADQKISMMTDYCKTIKDATRVPDPWYEG--GFDHVLDLLEDACN 185
BLAST of EWM23369.1 vs. NCBI_GenBank
Match: gi|970642164|gb|KUF83944.1| (hypothetical protein AM587_10009428 [Phytophthora nicotianae] >gi|970656644|gb|KUF94630.1| hypothetical protein AM587_10012205 [Phytophthora nicotianae] >gi|970657200|gb|KUF95116.1| 6-hydroxy-D-nicotine oxidase [Phytophthora nicotianae]) HSP 1 Score: 197.978 bits (502), Expect = 3.391e-60 Identity = 98/165 (59.39%), Postives = 117/165 (70.91%), Query Frame = 0 Query: 70 VLFVCLGNICRSPTAEAVFKSVVEREG--KSSHIHIDSCGTGGGNPGWYQKGGWSYHEGDMADSRMRAAASKRGIDITSRSRPLKAEDIDFFDFLICMDGANKSAVMEAADYWGKT---QTAAKKIRLMTEYCTINKGARTVPDPYYGGADGFEKVLDLLQDACD 229 VLFVCLGNICRSP EAV +V ++ ++ HIDSCGTGGGNP WY GGWSYHEG+ ADSRM A KRG +TSRSRPL +DID FD++ICM+ NK AV+EAA+ WG A +KI +MT+YC K A VPDP+Y G GF+ VLDLL+DACD Sbjct: 4 VLFVCLGNICRSPAGEAVLMGIVAKKAGADAASFHIDSCGTGGGNPNWYGAGGWSYHEGEAADSRMTKEAKKRGYIMTSRSRPLNKQDIDEFDYIICMEDKNKEAVLEAAEAWGGVPCRDLADQKISMMTDYCKTIKDATRVPDPWYEG--GFDHVLDLLEDACD 166 The following BLAST results are available for this feature:
BLAST of EWM23369.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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