EWM23354.1, cds7308 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23354.1 vs. NCBI_GenBank
Match: gi|585104362|gb|EWM23354.1| (triacylglycerol lipase [Nannochloropsis gaditana]) HSP 1 Score: 2208.34 bits (5721), Expect = 0.000e+0 Identity = 1116/1116 (100.00%), Postives = 1116/1116 (100.00%), Query Frame = 0 Query: 1 MQRTRQMHSPRLLLWVLLLAAVGSGAVGWGRLAFAPSLASRPSSWHSRWHKRRLGPVFWDSGASISPKSRTCMSIAPHGPREASRPGVGSPGGRSPLDFGPPFQKDGNFLREHSPRLQQDTRQVADSATHRREPREEESPSARAPPSSVSPPPPQTAAASQRKPFSLSKAVLMGPFAFEAYTDPPRTSGYWQSGRDKNEVAILHEGFLREAYAGKLRVRVKAVTETRAEAQAVFLKAAGARTEGQGPSGKEGARAGGSVGNPRAEMLAVSVAMEMGEEFVGSQMVRLERVEREEGGESNVYVPVRGALAGRETGLGGSVGVAGLEDAGLEAWVPAPRAQMQEGGETLLRFSLRGKEECSLGVAEVDVADLLGGCGREEGARSWERDLLLTAPAGRGHGVEGDDRGEDARRRLAEAASGVRVRVEMVFTPLARPSVSAPSALEAPACAEMGAGADSGLGVSQDARDGGSEEAGAGGGETEKRGREREKGKGREWVGARGCSRDWRELAEALGGEAVRAADLELLCFLENRVTDTQLKVWRDRAGTGGRKRLLVAFRGTEFWKVRDLITDMKLLQDPWAVHELDKREGGKEGRKTEVSPFLATAQASPQESREQEGSREARWSEEGPQAETGEGRSGTGTAASRSPTPGLDFYAALATQANRTYMLYNDMDRAVKETFGYVWRNTPFFGALPLSAPASPPPSFPFSSHAAPQPFSGSSSTNTSPRSDLPLHAPGCPSPPSPAPLLTAPAKSNEEAITSVLMAVLDRVMGNNPLASSPSLPSSPPSSFFVQPLSGQVRSPSDFRAAFYGLASDLGRQLFPASPSASPSPAAGDETDDKREKSQKSPCDPDGRGRGGNGGVETGDQAVLGVVGEEVKSPLLMLPSRFKGVFATLVDETFQLMDSRSFFPSSPPTLLAPRPPSPADPSVFPEADFRASLLQGLDQVVSGLQKKQIEQLAAPTTRARTLSSPPSSPAPPLPFPPAWTPPPSAPAPRLGSTQASKKPISLSVRACWPSWMRRPWGPWKEGGRRIGRSSSRAILWAGLWPPCVPTTCPHGTQGSPCPCTILARPASGTRPSPAPTKRATAIATGSSTRTTPSPASLATCTRRSSTTSTRARPSS 1116 MQRTRQMHSPRLLLWVLLLAAVGSGAVGWGRLAFAPSLASRPSSWHSRWHKRRLGPVFWDSGASISPKSRTCMSIAPHGPREASRPGVGSPGGRSPLDFGPPFQKDGNFLREHSPRLQQDTRQVADSATHRREPREEESPSARAPPSSVSPPPPQTAAASQRKPFSLSKAVLMGPFAFEAYTDPPRTSGYWQSGRDKNEVAILHEGFLREAYAGKLRVRVKAVTETRAEAQAVFLKAAGARTEGQGPSGKEGARAGGSVGNPRAEMLAVSVAMEMGEEFVGSQMVRLERVEREEGGESNVYVPVRGALAGRETGLGGSVGVAGLEDAGLEAWVPAPRAQMQEGGETLLRFSLRGKEECSLGVAEVDVADLLGGCGREEGARSWERDLLLTAPAGRGHGVEGDDRGEDARRRLAEAASGVRVRVEMVFTPLARPSVSAPSALEAPACAEMGAGADSGLGVSQDARDGGSEEAGAGGGETEKRGREREKGKGREWVGARGCSRDWRELAEALGGEAVRAADLELLCFLENRVTDTQLKVWRDRAGTGGRKRLLVAFRGTEFWKVRDLITDMKLLQDPWAVHELDKREGGKEGRKTEVSPFLATAQASPQESREQEGSREARWSEEGPQAETGEGRSGTGTAASRSPTPGLDFYAALATQANRTYMLYNDMDRAVKETFGYVWRNTPFFGALPLSAPASPPPSFPFSSHAAPQPFSGSSSTNTSPRSDLPLHAPGCPSPPSPAPLLTAPAKSNEEAITSVLMAVLDRVMGNNPLASSPSLPSSPPSSFFVQPLSGQVRSPSDFRAAFYGLASDLGRQLFPASPSASPSPAAGDETDDKREKSQKSPCDPDGRGRGGNGGVETGDQAVLGVVGEEVKSPLLMLPSRFKGVFATLVDETFQLMDSRSFFPSSPPTLLAPRPPSPADPSVFPEADFRASLLQGLDQVVSGLQKKQIEQLAAPTTRARTLSSPPSSPAPPLPFPPAWTPPPSAPAPRLGSTQASKKPISLSVRACWPSWMRRPWGPWKEGGRRIGRSSSRAILWAGLWPPCVPTTCPHGTQGSPCPCTILARPASGTRPSPAPTKRATAIATGSSTRTTPSPASLATCTRRSSTTSTRARPSS Sbjct: 1 MQRTRQMHSPRLLLWVLLLAAVGSGAVGWGRLAFAPSLASRPSSWHSRWHKRRLGPVFWDSGASISPKSRTCMSIAPHGPREASRPGVGSPGGRSPLDFGPPFQKDGNFLREHSPRLQQDTRQVADSATHRREPREEESPSARAPPSSVSPPPPQTAAASQRKPFSLSKAVLMGPFAFEAYTDPPRTSGYWQSGRDKNEVAILHEGFLREAYAGKLRVRVKAVTETRAEAQAVFLKAAGARTEGQGPSGKEGARAGGSVGNPRAEMLAVSVAMEMGEEFVGSQMVRLERVEREEGGESNVYVPVRGALAGRETGLGGSVGVAGLEDAGLEAWVPAPRAQMQEGGETLLRFSLRGKEECSLGVAEVDVADLLGGCGREEGARSWERDLLLTAPAGRGHGVEGDDRGEDARRRLAEAASGVRVRVEMVFTPLARPSVSAPSALEAPACAEMGAGADSGLGVSQDARDGGSEEAGAGGGETEKRGREREKGKGREWVGARGCSRDWRELAEALGGEAVRAADLELLCFLENRVTDTQLKVWRDRAGTGGRKRLLVAFRGTEFWKVRDLITDMKLLQDPWAVHELDKREGGKEGRKTEVSPFLATAQASPQESREQEGSREARWSEEGPQAETGEGRSGTGTAASRSPTPGLDFYAALATQANRTYMLYNDMDRAVKETFGYVWRNTPFFGALPLSAPASPPPSFPFSSHAAPQPFSGSSSTNTSPRSDLPLHAPGCPSPPSPAPLLTAPAKSNEEAITSVLMAVLDRVMGNNPLASSPSLPSSPPSSFFVQPLSGQVRSPSDFRAAFYGLASDLGRQLFPASPSASPSPAAGDETDDKREKSQKSPCDPDGRGRGGNGGVETGDQAVLGVVGEEVKSPLLMLPSRFKGVFATLVDETFQLMDSRSFFPSSPPTLLAPRPPSPADPSVFPEADFRASLLQGLDQVVSGLQKKQIEQLAAPTTRARTLSSPPSSPAPPLPFPPAWTPPPSAPAPRLGSTQASKKPISLSVRACWPSWMRRPWGPWKEGGRRIGRSSSRAILWAGLWPPCVPTTCPHGTQGSPCPCTILARPASGTRPSPAPTKRATAIATGSSTRTTPSPASLATCTRRSSTTSTRARPSS 1116
BLAST of EWM23354.1 vs. NCBI_GenBank
Match: gi|873238115|emb|CEL96583.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 80.1073 bits (196), Expect = 1.957e-11 Identity = 40/83 (48.19%), Postives = 52/83 (62.65%), Query Frame = 0 Query: 498 GCSRDWRELAEALGGEAVRAADLELLCFLENRVTDTQLKVWRDRAGTGGRKRLLVAFRGTEFWKVRDLITDMKLLQDPWAVHE 580 GCS DW LA + G A+D E +CFL+N T TQ+ +WRD RKRL+VAFRGTE RD +TD+ L+Q+P + E Sbjct: 427 GCSADWSALARQVWGLEPWASDFEFICFLQNVFTCTQVGLWRD----NRRKRLVVAFRGTEMTSWRDFLTDITLVQEPLQLDE 505
BLAST of EWM23354.1 vs. NCBI_GenBank
Match: gi|326504440|dbj|BAJ91052.1| (predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 76.6406 bits (187), Expect = 2.173e-10 Identity = 59/186 (31.72%), Postives = 87/186 (46.77%), Query Frame = 0 Query: 390 TAPAGRGHGVEGDDRGEDARRRLA--EAASGVRVRVEMVFTPLARPSVSAPSALEAPACAEMGAGADSGLGVSQDARDGGSEEAGAGGGETEKRGREREKGKGRE-WVGARGCSRDWRELAEALGGEAVRAADLELLCFLENRVTDTQLKVWRDRAGTGGRKRLLVAFRGTEFWKVRDLITDMKLL 572 T PA V D E +R L+ E G V + F+ + SV + + E GA ADS +E GA TE ++ R+ + A W LA ++G + +D E +CFL+N TDTQ+ +WRD + R+RL+VAFRGTE + +DL+TD+ L+ Sbjct: 456 TTPAKEAVQVSFPDINEVSRDVLSQTENVLGALVILSKNFSSQGKDSVEKTNQKDNSNAEEQGA-ADS------------VDEDGAAVASTEVSKNTQKTDDTRQLFASAETAVEAWAMLATSMGRSSFIKSDFEKICFLDNVSTDTQVAIWRDSS----RRRLVVAFRGTEQTRWKDLVTDLMLV 624
BLAST of EWM23354.1 vs. NCBI_GenBank
Match: gi|1149808896|ref|XP_020163925.1| (uncharacterized protein LOC109749374 isoform X1 [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 75.485 bits (184), Expect = 5.016e-10 Identity = 51/163 (31.29%), Postives = 79/163 (48.47%), Query Frame = 0 Query: 411 RLAEAASGVRVRVEMVFTPLARPSVSAPSALEAPACAEMGAGADSGLGVSQDARDGGSEEAGAGGGETEKRGREREKGKGRE-WVGARGCSRDWRELAEALGGEAVRAADLELLCFLENRVTDTQLKVWRDRAGTGGRKRLLVAFRGTEFWKVRDLITDMKLL 572 + E + V + E V L S + S + D+ G QDA D ++ GA TE ++ R+ + A W LA ++G + +D E +CFL+N TDTQ+ +WRD + R+RL+VAFRGTE + +DL+TD+ L+ Sbjct: 469 NINEISRDVLSQTENVLGALVILSKNFSSQGKDSVTINEANQKDNSNGEEQDAADSVDKD-GAAVSTTEVSINTQKTDDTRQLFASAETAVEAWAMLATSMGRSSFIKSDFEKICFLDNVSTDTQVAIWRDSS----RRRLVVAFRGTEQTRWKDLVTDLMLV 626
BLAST of EWM23354.1 vs. NCBI_GenBank
Match: gi|1149808899|ref|XP_020163926.1| (uncharacterized protein LOC109749374 isoform X2 [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 74.7146 bits (182), Expect = 6.687e-10 Identity = 51/163 (31.29%), Postives = 79/163 (48.47%), Query Frame = 0 Query: 411 RLAEAASGVRVRVEMVFTPLARPSVSAPSALEAPACAEMGAGADSGLGVSQDARDGGSEEAGAGGGETEKRGREREKGKGRE-WVGARGCSRDWRELAEALGGEAVRAADLELLCFLENRVTDTQLKVWRDRAGTGGRKRLLVAFRGTEFWKVRDLITDMKLL 572 + E + V + E V L S + S + D+ G QDA D ++ GA TE ++ R+ + A W LA ++G + +D E +CFL+N TDTQ+ +WRD + R+RL+VAFRGTE + +DL+TD+ L+ Sbjct: 332 NINEISRDVLSQTENVLGALVILSKNFSSQGKDSVTINEANQKDNSNGEEQDAADSVDKD-GAAVSTTEVSINTQKTDDTRQLFASAETAVEAWAMLATSMGRSSFIKSDFEKICFLDNVSTDTQVAIWRDSS----RRRLVVAFRGTEQTRWKDLVTDLMLV 489
BLAST of EWM23354.1 vs. NCBI_GenBank
Match: gi|110741848|dbj|BAE98866.1| (hypothetical protein [Arabidopsis thaliana]) HSP 1 Score: 70.4774 bits (171), Expect = 1.418e-9 Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 0 Query: 503 WRELAEALGGEAVRAADLELLCFLENRVTDTQLKVWRDRAGTGGRKRLLVAFRGTEFWKVRDLITDMKLL 572 W LA ALG + ++ E LCFLEN +TDTQ+ +WRD RKR+++AFRGTE K +DL TD+ L+ Sbjct: 92 WAMLATALGHPSFIKSEFEKLCFLENDITDTQVAIWRD----ARRKRVVIAFRGTEQTKWKDLQTDLMLV 157
BLAST of EWM23354.1 vs. NCBI_GenBank
Match: gi|1091641037|ref|XP_018673549.1| (PREDICTED: uncharacterized protein LOC103976508 isoform X4 [Musa acuminata subsp. malaccensis]) HSP 1 Score: 73.559 bits (179), Expect = 1.736e-9 Identity = 52/149 (34.90%), Postives = 72/149 (48.32%), Query Frame = 0 Query: 425 MVFT-PLARPSVSAPSALEAPACAEMGAGADSGLGVSQDARDGGSEEAGAGGGETEKRGREREKGKGREWVGARGCSRDWRELAEALGGEAVRAADLELLCFLENRVTDTQLKVWRDRAGTGGRKRLLVAFRGTEFWKVRDLITDMKLL 572 M+ T L++ S LE+ + D G S + D G+ +TEK RE + A W LA +LG + +D E +CFL+N TDTQ+ +WRD R+RL+VAFRGTE K +DL TD+ LL Sbjct: 488 MILTATLSQQRNDLMSLLESSGREDTSKTEDDIAGYS--SNDTGTVAVEGFELDTEKAEEMREL-----FSSAESAMEAWTMLATSLGRTSFIKSDFEKICFLDNTTTDTQVAIWRDSV----RRRLVVAFRGTEQSKWKDLCTDLMLL 625
BLAST of EWM23354.1 vs. NCBI_GenBank
Match: gi|1091641034|ref|XP_018673548.1| (PREDICTED: uncharacterized protein LOC103976508 isoform X3 [Musa acuminata subsp. malaccensis]) HSP 1 Score: 73.1738 bits (178), Expect = 1.986e-9 Identity = 52/149 (34.90%), Postives = 72/149 (48.32%), Query Frame = 0 Query: 425 MVFT-PLARPSVSAPSALEAPACAEMGAGADSGLGVSQDARDGGSEEAGAGGGETEKRGREREKGKGREWVGARGCSRDWRELAEALGGEAVRAADLELLCFLENRVTDTQLKVWRDRAGTGGRKRLLVAFRGTEFWKVRDLITDMKLL 572 M+ T L++ S LE+ + D G S + D G+ +TEK RE + A W LA +LG + +D E +CFL+N TDTQ+ +WRD R+RL+VAFRGTE K +DL TD+ LL Sbjct: 488 MILTATLSQQRNDLMSLLESSGREDTSKTEDDIAGYS--SNDTGTVAVEGFELDTEKAEEMREL-----FSSAESAMEAWTMLATSLGRTSFIKSDFEKICFLDNTTTDTQVAIWRDSV----RRRLVVAFRGTEQSKWKDLCTDLMLL 625
BLAST of EWM23354.1 vs. NCBI_GenBank
Match: gi|1091641031|ref|XP_018673546.1| (PREDICTED: uncharacterized protein LOC103976508 isoform X2 [Musa acuminata subsp. malaccensis]) HSP 1 Score: 73.1738 bits (178), Expect = 2.062e-9 Identity = 52/149 (34.90%), Postives = 72/149 (48.32%), Query Frame = 0 Query: 425 MVFT-PLARPSVSAPSALEAPACAEMGAGADSGLGVSQDARDGGSEEAGAGGGETEKRGREREKGKGREWVGARGCSRDWRELAEALGGEAVRAADLELLCFLENRVTDTQLKVWRDRAGTGGRKRLLVAFRGTEFWKVRDLITDMKLL 572 M+ T L++ S LE+ + D G S + D G+ +TEK RE + A W LA +LG + +D E +CFL+N TDTQ+ +WRD R+RL+VAFRGTE K +DL TD+ LL Sbjct: 466 MILTATLSQQRNDLMSLLESSGREDTSKTEDDIAGYS--SNDTGTVAVEGFELDTEKAEEMREL-----FSSAESAMEAWTMLATSLGRTSFIKSDFEKICFLDNTTTDTQVAIWRDSV----RRRLVVAFRGTEQSKWKDLCTDLMLL 603
BLAST of EWM23354.1 vs. NCBI_GenBank
Match: gi|694995708|ref|XP_009390013.1| (PREDICTED: uncharacterized protein LOC103976508 isoform X1 [Musa acuminata subsp. malaccensis]) HSP 1 Score: 73.1738 bits (178), Expect = 2.439e-9 Identity = 52/149 (34.90%), Postives = 72/149 (48.32%), Query Frame = 0 Query: 425 MVFT-PLARPSVSAPSALEAPACAEMGAGADSGLGVSQDARDGGSEEAGAGGGETEKRGREREKGKGREWVGARGCSRDWRELAEALGGEAVRAADLELLCFLENRVTDTQLKVWRDRAGTGGRKRLLVAFRGTEFWKVRDLITDMKLL 572 M+ T L++ S LE+ + D G S + D G+ +TEK RE + A W LA +LG + +D E +CFL+N TDTQ+ +WRD R+RL+VAFRGTE K +DL TD+ LL Sbjct: 488 MILTATLSQQRNDLMSLLESSGREDTSKTEDDIAGYS--SNDTGTVAVEGFELDTEKAEEMREL-----FSSAESAMEAWTMLATSLGRTSFIKSDFEKICFLDNTTTDTQVAIWRDSV----RRRLVVAFRGTEQSKWKDLCTDLMLL 625 The following BLAST results are available for this feature:
BLAST of EWM23354.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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