EWM23354.1, cds7308 (CDS) Nannochloropsis gaditana

Overview
NameEWM23354.1
Unique Namecds7308
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:332399..335749 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23354.1
Producttriacylglycerol lipase
Orig transcript idgnl|cribi|Naga_100057g25.3913.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:332399..335749 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
Homology
BLAST of EWM23354.1 vs. NCBI_GenBank
Match: gi|585104362|gb|EWM23354.1| (triacylglycerol lipase [Nannochloropsis gaditana])

HSP 1 Score: 2208.34 bits (5721), Expect = 0.000e+0
Identity = 1116/1116 (100.00%), Postives = 1116/1116 (100.00%), Query Frame = 0
Query:    1 MQRTRQMHSPRLLLWVLLLAAVGSGAVGWGRLAFAPSLASRPSSWHSRWHKRRLGPVFWDSGASISPKSRTCMSIAPHGPREASRPGVGSPGGRSPLDFGPPFQKDGNFLREHSPRLQQDTRQVADSATHRREPREEESPSARAPPSSVSPPPPQTAAASQRKPFSLSKAVLMGPFAFEAYTDPPRTSGYWQSGRDKNEVAILHEGFLREAYAGKLRVRVKAVTETRAEAQAVFLKAAGARTEGQGPSGKEGARAGGSVGNPRAEMLAVSVAMEMGEEFVGSQMVRLERVEREEGGESNVYVPVRGALAGRETGLGGSVGVAGLEDAGLEAWVPAPRAQMQEGGETLLRFSLRGKEECSLGVAEVDVADLLGGCGREEGARSWERDLLLTAPAGRGHGVEGDDRGEDARRRLAEAASGVRVRVEMVFTPLARPSVSAPSALEAPACAEMGAGADSGLGVSQDARDGGSEEAGAGGGETEKRGREREKGKGREWVGARGCSRDWRELAEALGGEAVRAADLELLCFLENRVTDTQLKVWRDRAGTGGRKRLLVAFRGTEFWKVRDLITDMKLLQDPWAVHELDKREGGKEGRKTEVSPFLATAQASPQESREQEGSREARWSEEGPQAETGEGRSGTGTAASRSPTPGLDFYAALATQANRTYMLYNDMDRAVKETFGYVWRNTPFFGALPLSAPASPPPSFPFSSHAAPQPFSGSSSTNTSPRSDLPLHAPGCPSPPSPAPLLTAPAKSNEEAITSVLMAVLDRVMGNNPLASSPSLPSSPPSSFFVQPLSGQVRSPSDFRAAFYGLASDLGRQLFPASPSASPSPAAGDETDDKREKSQKSPCDPDGRGRGGNGGVETGDQAVLGVVGEEVKSPLLMLPSRFKGVFATLVDETFQLMDSRSFFPSSPPTLLAPRPPSPADPSVFPEADFRASLLQGLDQVVSGLQKKQIEQLAAPTTRARTLSSPPSSPAPPLPFPPAWTPPPSAPAPRLGSTQASKKPISLSVRACWPSWMRRPWGPWKEGGRRIGRSSSRAILWAGLWPPCVPTTCPHGTQGSPCPCTILARPASGTRPSPAPTKRATAIATGSSTRTTPSPASLATCTRRSSTTSTRARPSS 1116
            MQRTRQMHSPRLLLWVLLLAAVGSGAVGWGRLAFAPSLASRPSSWHSRWHKRRLGPVFWDSGASISPKSRTCMSIAPHGPREASRPGVGSPGGRSPLDFGPPFQKDGNFLREHSPRLQQDTRQVADSATHRREPREEESPSARAPPSSVSPPPPQTAAASQRKPFSLSKAVLMGPFAFEAYTDPPRTSGYWQSGRDKNEVAILHEGFLREAYAGKLRVRVKAVTETRAEAQAVFLKAAGARTEGQGPSGKEGARAGGSVGNPRAEMLAVSVAMEMGEEFVGSQMVRLERVEREEGGESNVYVPVRGALAGRETGLGGSVGVAGLEDAGLEAWVPAPRAQMQEGGETLLRFSLRGKEECSLGVAEVDVADLLGGCGREEGARSWERDLLLTAPAGRGHGVEGDDRGEDARRRLAEAASGVRVRVEMVFTPLARPSVSAPSALEAPACAEMGAGADSGLGVSQDARDGGSEEAGAGGGETEKRGREREKGKGREWVGARGCSRDWRELAEALGGEAVRAADLELLCFLENRVTDTQLKVWRDRAGTGGRKRLLVAFRGTEFWKVRDLITDMKLLQDPWAVHELDKREGGKEGRKTEVSPFLATAQASPQESREQEGSREARWSEEGPQAETGEGRSGTGTAASRSPTPGLDFYAALATQANRTYMLYNDMDRAVKETFGYVWRNTPFFGALPLSAPASPPPSFPFSSHAAPQPFSGSSSTNTSPRSDLPLHAPGCPSPPSPAPLLTAPAKSNEEAITSVLMAVLDRVMGNNPLASSPSLPSSPPSSFFVQPLSGQVRSPSDFRAAFYGLASDLGRQLFPASPSASPSPAAGDETDDKREKSQKSPCDPDGRGRGGNGGVETGDQAVLGVVGEEVKSPLLMLPSRFKGVFATLVDETFQLMDSRSFFPSSPPTLLAPRPPSPADPSVFPEADFRASLLQGLDQVVSGLQKKQIEQLAAPTTRARTLSSPPSSPAPPLPFPPAWTPPPSAPAPRLGSTQASKKPISLSVRACWPSWMRRPWGPWKEGGRRIGRSSSRAILWAGLWPPCVPTTCPHGTQGSPCPCTILARPASGTRPSPAPTKRATAIATGSSTRTTPSPASLATCTRRSSTTSTRARPSS
Sbjct:    1 MQRTRQMHSPRLLLWVLLLAAVGSGAVGWGRLAFAPSLASRPSSWHSRWHKRRLGPVFWDSGASISPKSRTCMSIAPHGPREASRPGVGSPGGRSPLDFGPPFQKDGNFLREHSPRLQQDTRQVADSATHRREPREEESPSARAPPSSVSPPPPQTAAASQRKPFSLSKAVLMGPFAFEAYTDPPRTSGYWQSGRDKNEVAILHEGFLREAYAGKLRVRVKAVTETRAEAQAVFLKAAGARTEGQGPSGKEGARAGGSVGNPRAEMLAVSVAMEMGEEFVGSQMVRLERVEREEGGESNVYVPVRGALAGRETGLGGSVGVAGLEDAGLEAWVPAPRAQMQEGGETLLRFSLRGKEECSLGVAEVDVADLLGGCGREEGARSWERDLLLTAPAGRGHGVEGDDRGEDARRRLAEAASGVRVRVEMVFTPLARPSVSAPSALEAPACAEMGAGADSGLGVSQDARDGGSEEAGAGGGETEKRGREREKGKGREWVGARGCSRDWRELAEALGGEAVRAADLELLCFLENRVTDTQLKVWRDRAGTGGRKRLLVAFRGTEFWKVRDLITDMKLLQDPWAVHELDKREGGKEGRKTEVSPFLATAQASPQESREQEGSREARWSEEGPQAETGEGRSGTGTAASRSPTPGLDFYAALATQANRTYMLYNDMDRAVKETFGYVWRNTPFFGALPLSAPASPPPSFPFSSHAAPQPFSGSSSTNTSPRSDLPLHAPGCPSPPSPAPLLTAPAKSNEEAITSVLMAVLDRVMGNNPLASSPSLPSSPPSSFFVQPLSGQVRSPSDFRAAFYGLASDLGRQLFPASPSASPSPAAGDETDDKREKSQKSPCDPDGRGRGGNGGVETGDQAVLGVVGEEVKSPLLMLPSRFKGVFATLVDETFQLMDSRSFFPSSPPTLLAPRPPSPADPSVFPEADFRASLLQGLDQVVSGLQKKQIEQLAAPTTRARTLSSPPSSPAPPLPFPPAWTPPPSAPAPRLGSTQASKKPISLSVRACWPSWMRRPWGPWKEGGRRIGRSSSRAILWAGLWPPCVPTTCPHGTQGSPCPCTILARPASGTRPSPAPTKRATAIATGSSTRTTPSPASLATCTRRSSTTSTRARPSS 1116          
BLAST of EWM23354.1 vs. NCBI_GenBank
Match: gi|873238115|emb|CEL96583.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 80.1073 bits (196), Expect = 1.957e-11
Identity = 40/83 (48.19%), Postives = 52/83 (62.65%), Query Frame = 0
Query:  498 GCSRDWRELAEALGGEAVRAADLELLCFLENRVTDTQLKVWRDRAGTGGRKRLLVAFRGTEFWKVRDLITDMKLLQDPWAVHE 580
            GCS DW  LA  + G    A+D E +CFL+N  T TQ+ +WRD      RKRL+VAFRGTE    RD +TD+ L+Q+P  + E
Sbjct:  427 GCSADWSALARQVWGLEPWASDFEFICFLQNVFTCTQVGLWRD----NRRKRLVVAFRGTEMTSWRDFLTDITLVQEPLQLDE 505          
BLAST of EWM23354.1 vs. NCBI_GenBank
Match: gi|326504440|dbj|BAJ91052.1| (predicted protein [Hordeum vulgare subsp. vulgare])

HSP 1 Score: 76.6406 bits (187), Expect = 2.173e-10
Identity = 59/186 (31.72%), Postives = 87/186 (46.77%), Query Frame = 0
Query:  390 TAPAGRGHGVEGDDRGEDARRRLA--EAASGVRVRVEMVFTPLARPSVSAPSALEAPACAEMGAGADSGLGVSQDARDGGSEEAGAGGGETEKRGREREKGKGRE-WVGARGCSRDWRELAEALGGEAVRAADLELLCFLENRVTDTQLKVWRDRAGTGGRKRLLVAFRGTEFWKVRDLITDMKLL 572
            T PA     V   D  E +R  L+  E   G  V +   F+   + SV   +  +     E GA ADS             +E GA    TE     ++    R+ +  A      W  LA ++G  +   +D E +CFL+N  TDTQ+ +WRD +    R+RL+VAFRGTE  + +DL+TD+ L+
Sbjct:  456 TTPAKEAVQVSFPDINEVSRDVLSQTENVLGALVILSKNFSSQGKDSVEKTNQKDNSNAEEQGA-ADS------------VDEDGAAVASTEVSKNTQKTDDTRQLFASAETAVEAWAMLATSMGRSSFIKSDFEKICFLDNVSTDTQVAIWRDSS----RRRLVVAFRGTEQTRWKDLVTDLMLV 624          
BLAST of EWM23354.1 vs. NCBI_GenBank
Match: gi|1149808896|ref|XP_020163925.1| (uncharacterized protein LOC109749374 isoform X1 [Aegilops tauschii subsp. tauschii])

HSP 1 Score: 75.485 bits (184), Expect = 5.016e-10
Identity = 51/163 (31.29%), Postives = 79/163 (48.47%), Query Frame = 0
Query:  411 RLAEAASGVRVRVEMVFTPLARPSVSAPSALEAPACAEMGAGADSGLGVSQDARDGGSEEAGAGGGETEKRGREREKGKGRE-WVGARGCSRDWRELAEALGGEAVRAADLELLCFLENRVTDTQLKVWRDRAGTGGRKRLLVAFRGTEFWKVRDLITDMKLL 572
             + E +  V  + E V   L   S +  S  +           D+  G  QDA D   ++ GA    TE     ++    R+ +  A      W  LA ++G  +   +D E +CFL+N  TDTQ+ +WRD +    R+RL+VAFRGTE  + +DL+TD+ L+
Sbjct:  469 NINEISRDVLSQTENVLGALVILSKNFSSQGKDSVTINEANQKDNSNGEEQDAADSVDKD-GAAVSTTEVSINTQKTDDTRQLFASAETAVEAWAMLATSMGRSSFIKSDFEKICFLDNVSTDTQVAIWRDSS----RRRLVVAFRGTEQTRWKDLVTDLMLV 626          
BLAST of EWM23354.1 vs. NCBI_GenBank
Match: gi|1149808899|ref|XP_020163926.1| (uncharacterized protein LOC109749374 isoform X2 [Aegilops tauschii subsp. tauschii])

HSP 1 Score: 74.7146 bits (182), Expect = 6.687e-10
Identity = 51/163 (31.29%), Postives = 79/163 (48.47%), Query Frame = 0
Query:  411 RLAEAASGVRVRVEMVFTPLARPSVSAPSALEAPACAEMGAGADSGLGVSQDARDGGSEEAGAGGGETEKRGREREKGKGRE-WVGARGCSRDWRELAEALGGEAVRAADLELLCFLENRVTDTQLKVWRDRAGTGGRKRLLVAFRGTEFWKVRDLITDMKLL 572
             + E +  V  + E V   L   S +  S  +           D+  G  QDA D   ++ GA    TE     ++    R+ +  A      W  LA ++G  +   +D E +CFL+N  TDTQ+ +WRD +    R+RL+VAFRGTE  + +DL+TD+ L+
Sbjct:  332 NINEISRDVLSQTENVLGALVILSKNFSSQGKDSVTINEANQKDNSNGEEQDAADSVDKD-GAAVSTTEVSINTQKTDDTRQLFASAETAVEAWAMLATSMGRSSFIKSDFEKICFLDNVSTDTQVAIWRDSS----RRRLVVAFRGTEQTRWKDLVTDLMLV 489          
BLAST of EWM23354.1 vs. NCBI_GenBank
Match: gi|110741848|dbj|BAE98866.1| (hypothetical protein [Arabidopsis thaliana])

HSP 1 Score: 70.4774 bits (171), Expect = 1.418e-9
Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 0
Query:  503 WRELAEALGGEAVRAADLELLCFLENRVTDTQLKVWRDRAGTGGRKRLLVAFRGTEFWKVRDLITDMKLL 572
            W  LA ALG  +   ++ E LCFLEN +TDTQ+ +WRD      RKR+++AFRGTE  K +DL TD+ L+
Sbjct:   92 WAMLATALGHPSFIKSEFEKLCFLENDITDTQVAIWRD----ARRKRVVIAFRGTEQTKWKDLQTDLMLV 157          
BLAST of EWM23354.1 vs. NCBI_GenBank
Match: gi|1091641037|ref|XP_018673549.1| (PREDICTED: uncharacterized protein LOC103976508 isoform X4 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 73.559 bits (179), Expect = 1.736e-9
Identity = 52/149 (34.90%), Postives = 72/149 (48.32%), Query Frame = 0
Query:  425 MVFT-PLARPSVSAPSALEAPACAEMGAGADSGLGVSQDARDGGSEEAGAGGGETEKRGREREKGKGREWVGARGCSRDWRELAEALGGEAVRAADLELLCFLENRVTDTQLKVWRDRAGTGGRKRLLVAFRGTEFWKVRDLITDMKLL 572
            M+ T  L++      S LE+    +     D   G S  + D G+        +TEK    RE      +  A      W  LA +LG  +   +D E +CFL+N  TDTQ+ +WRD      R+RL+VAFRGTE  K +DL TD+ LL
Sbjct:  488 MILTATLSQQRNDLMSLLESSGREDTSKTEDDIAGYS--SNDTGTVAVEGFELDTEKAEEMREL-----FSSAESAMEAWTMLATSLGRTSFIKSDFEKICFLDNTTTDTQVAIWRDSV----RRRLVVAFRGTEQSKWKDLCTDLMLL 625          
BLAST of EWM23354.1 vs. NCBI_GenBank
Match: gi|1091641034|ref|XP_018673548.1| (PREDICTED: uncharacterized protein LOC103976508 isoform X3 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 73.1738 bits (178), Expect = 1.986e-9
Identity = 52/149 (34.90%), Postives = 72/149 (48.32%), Query Frame = 0
Query:  425 MVFT-PLARPSVSAPSALEAPACAEMGAGADSGLGVSQDARDGGSEEAGAGGGETEKRGREREKGKGREWVGARGCSRDWRELAEALGGEAVRAADLELLCFLENRVTDTQLKVWRDRAGTGGRKRLLVAFRGTEFWKVRDLITDMKLL 572
            M+ T  L++      S LE+    +     D   G S  + D G+        +TEK    RE      +  A      W  LA +LG  +   +D E +CFL+N  TDTQ+ +WRD      R+RL+VAFRGTE  K +DL TD+ LL
Sbjct:  488 MILTATLSQQRNDLMSLLESSGREDTSKTEDDIAGYS--SNDTGTVAVEGFELDTEKAEEMREL-----FSSAESAMEAWTMLATSLGRTSFIKSDFEKICFLDNTTTDTQVAIWRDSV----RRRLVVAFRGTEQSKWKDLCTDLMLL 625          
BLAST of EWM23354.1 vs. NCBI_GenBank
Match: gi|1091641031|ref|XP_018673546.1| (PREDICTED: uncharacterized protein LOC103976508 isoform X2 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 73.1738 bits (178), Expect = 2.062e-9
Identity = 52/149 (34.90%), Postives = 72/149 (48.32%), Query Frame = 0
Query:  425 MVFT-PLARPSVSAPSALEAPACAEMGAGADSGLGVSQDARDGGSEEAGAGGGETEKRGREREKGKGREWVGARGCSRDWRELAEALGGEAVRAADLELLCFLENRVTDTQLKVWRDRAGTGGRKRLLVAFRGTEFWKVRDLITDMKLL 572
            M+ T  L++      S LE+    +     D   G S  + D G+        +TEK    RE      +  A      W  LA +LG  +   +D E +CFL+N  TDTQ+ +WRD      R+RL+VAFRGTE  K +DL TD+ LL
Sbjct:  466 MILTATLSQQRNDLMSLLESSGREDTSKTEDDIAGYS--SNDTGTVAVEGFELDTEKAEEMREL-----FSSAESAMEAWTMLATSLGRTSFIKSDFEKICFLDNTTTDTQVAIWRDSV----RRRLVVAFRGTEQSKWKDLCTDLMLL 603          
BLAST of EWM23354.1 vs. NCBI_GenBank
Match: gi|694995708|ref|XP_009390013.1| (PREDICTED: uncharacterized protein LOC103976508 isoform X1 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 73.1738 bits (178), Expect = 2.439e-9
Identity = 52/149 (34.90%), Postives = 72/149 (48.32%), Query Frame = 0
Query:  425 MVFT-PLARPSVSAPSALEAPACAEMGAGADSGLGVSQDARDGGSEEAGAGGGETEKRGREREKGKGREWVGARGCSRDWRELAEALGGEAVRAADLELLCFLENRVTDTQLKVWRDRAGTGGRKRLLVAFRGTEFWKVRDLITDMKLL 572
            M+ T  L++      S LE+    +     D   G S  + D G+        +TEK    RE      +  A      W  LA +LG  +   +D E +CFL+N  TDTQ+ +WRD      R+RL+VAFRGTE  K +DL TD+ LL
Sbjct:  488 MILTATLSQQRNDLMSLLESSGREDTSKTEDDIAGYS--SNDTGTVAVEGFELDTEKAEEMREL-----FSSAESAMEAWTMLATSLGRTSFIKSDFEKICFLDNTTTDTQVAIWRDSV----RRRLVVAFRGTEQSKWKDLCTDLMLL 625          
The following BLAST results are available for this feature:
BLAST of EWM23354.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104362|gb|EWM23354.1|0.000e+0100.00triacylglycerol lipase [Nannochloropsis gaditana][more]
gi|873238115|emb|CEL96583.1|1.957e-1148.19unnamed protein product [Vitrella brassicaformis C... [more]
gi|326504440|dbj|BAJ91052.1|2.173e-1031.72predicted protein [Hordeum vulgare subsp. vulgare][more]
gi|1149808896|ref|XP_020163925.1|5.016e-1031.29uncharacterized protein LOC109749374 isoform X1 [A... [more]
gi|1149808899|ref|XP_020163926.1|6.687e-1031.29uncharacterized protein LOC109749374 isoform X2 [A... [more]
gi|110741848|dbj|BAE98866.1|1.418e-950.00hypothetical protein [Arabidopsis thaliana][more]
gi|1091641037|ref|XP_018673549.1|1.736e-934.90PREDICTED: uncharacterized protein LOC103976508 is... [more]
gi|1091641034|ref|XP_018673548.1|1.986e-934.90PREDICTED: uncharacterized protein LOC103976508 is... [more]
gi|1091641031|ref|XP_018673546.1|2.062e-934.90PREDICTED: uncharacterized protein LOC103976508 is... [more]
gi|694995708|ref|XP_009390013.1|2.439e-934.90PREDICTED: uncharacterized protein LOC103976508 is... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7325rna7325Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications