EWM23368.1, cds7303 (CDS) Nannochloropsis gaditana

Overview
NameEWM23368.1
Unique Namecds7303
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:319945..321483 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23368.1
ProductWD40 repeat containing protein
Orig transcript idgnl|cribi|Naga_100057g30.3927.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:319945..321483 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR015943WD40/YVTN_repeat-like_dom
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
Homology
BLAST of EWM23368.1 vs. NCBI_GenBank
Match: gi|585104376|gb|EWM23368.1| (WD40 repeat containing protein [Nannochloropsis gaditana])

HSP 1 Score: 1034.63 bits (2674), Expect = 0.000e+0
Identity = 512/512 (100.00%), Postives = 512/512 (100.00%), Query Frame = 0
Query:    1 MDQDGQNRTQETVLEGEDGPLMILAEDVLEEFEVDDEAPPLESEDESEDESEGIEEHEGNIKLPSGMRLVAEYANGDMEVLGEEGEAGLPTSVADMAVLSFRGHKGPIYAVAINPRDSRSMLTGGGDDRAFFWETTAAAPSVNTSTSMPGLGAVKESEDHGESVNAVGYSHDGSLAATGAYSGKVLVWDAKTRGLLQTLEGPEDVEWLQWHPKGNLLLAGSKDGTVWMWLAVTGECMRVFSGHEDAVTVGMFTSDGKLVVSGSMDGSVRVWGPKAGVCRHVFSGYAFHEGPVTALASHPSDGALLLSGGMDGTARLLHAAGKRVLASMVHSEPTAVGNGGGGASVNGRGKEGGKSEGGVAPMEEDGTGPGTEEGVAGEEVHEGNYSVETVGFSSVLNWCATGGMDGTMKIWDLGNFSCRHVCVHPGLPGVTKLQWHASLPLIYTAATDGVLRLWDARSGALLQAMTGHEDMILDFAVHSADGHMDVVLTGSDDGTAKVFWVDVQRYLQQSCS 512
            MDQDGQNRTQETVLEGEDGPLMILAEDVLEEFEVDDEAPPLESEDESEDESEGIEEHEGNIKLPSGMRLVAEYANGDMEVLGEEGEAGLPTSVADMAVLSFRGHKGPIYAVAINPRDSRSMLTGGGDDRAFFWETTAAAPSVNTSTSMPGLGAVKESEDHGESVNAVGYSHDGSLAATGAYSGKVLVWDAKTRGLLQTLEGPEDVEWLQWHPKGNLLLAGSKDGTVWMWLAVTGECMRVFSGHEDAVTVGMFTSDGKLVVSGSMDGSVRVWGPKAGVCRHVFSGYAFHEGPVTALASHPSDGALLLSGGMDGTARLLHAAGKRVLASMVHSEPTAVGNGGGGASVNGRGKEGGKSEGGVAPMEEDGTGPGTEEGVAGEEVHEGNYSVETVGFSSVLNWCATGGMDGTMKIWDLGNFSCRHVCVHPGLPGVTKLQWHASLPLIYTAATDGVLRLWDARSGALLQAMTGHEDMILDFAVHSADGHMDVVLTGSDDGTAKVFWVDVQRYLQQSCS
Sbjct:    1 MDQDGQNRTQETVLEGEDGPLMILAEDVLEEFEVDDEAPPLESEDESEDESEGIEEHEGNIKLPSGMRLVAEYANGDMEVLGEEGEAGLPTSVADMAVLSFRGHKGPIYAVAINPRDSRSMLTGGGDDRAFFWETTAAAPSVNTSTSMPGLGAVKESEDHGESVNAVGYSHDGSLAATGAYSGKVLVWDAKTRGLLQTLEGPEDVEWLQWHPKGNLLLAGSKDGTVWMWLAVTGECMRVFSGHEDAVTVGMFTSDGKLVVSGSMDGSVRVWGPKAGVCRHVFSGYAFHEGPVTALASHPSDGALLLSGGMDGTARLLHAAGKRVLASMVHSEPTAVGNGGGGASVNGRGKEGGKSEGGVAPMEEDGTGPGTEEGVAGEEVHEGNYSVETVGFSSVLNWCATGGMDGTMKIWDLGNFSCRHVCVHPGLPGVTKLQWHASLPLIYTAATDGVLRLWDARSGALLQAMTGHEDMILDFAVHSADGHMDVVLTGSDDGTAKVFWVDVQRYLQQSCS 512          
BLAST of EWM23368.1 vs. NCBI_GenBank
Match: gi|1173933120|gb|OQR84987.1| (angio-associated migratory cell protein [Achlya hypogyna])

HSP 1 Score: 348.977 bits (894), Expect = 2.070e-112
Identity = 177/416 (42.55%), Postives = 245/416 (58.89%), Query Frame = 0
Query:   85 GEAGLPTSVADMAVLSFRGHKGPIYAVAINPRDSRSMLTGGGDDRAFFWETTAAAPSVNTSTSMPGLGAVKESEDHGESVNAVGYSHDGSLAATGAYSGKVLVWDAKTRGLLQTLEGP-EDVEWLQWHPKGNLLLAGSKDGTVWMWLAVTGECMRVFSGHEDAVTVGMFTSDGKLVVSGSMDGSVRVWGPKAGVCRHVFSGYAFHEGPVTALASHPSDGALLLSGGMDGTARLLHAAGKRVLASMVHSEPTAVGNGGGGASVNGRGKEGGKSEGGVAPMEEDGTGPGTEEGVAGEEVHEGNYSVETVGFSSVLNWCATGGMDGTMKIWDLGNFSCRHVCVHPGLPGVTKLQWHASLPLIYTAATDGVLRLWDARSGALLQAMTGHEDMILDFAVHSADGHMDVVLTGSDDGTAKVF 499
             EA +   + D A L FRGH GP+YA++++P D   +L+GGGDD    W             SM  L      + H +SV AVG+S DG LAATG Y G V VW+ +T  LL TL+GP +++EW++WH KGN+LLAGS DGT WMWLA TGECM VF+GHED++T G FT  GK++ +GS D +VR+W PK G C HVF G  FHEGP+  +  HP    +++S   DG+ARLLH   KR LA+  H+   A                   + G +A   +D     + E       H   +   + GF + LNWCAT  + G ++IWDL  + CRH+C H    GV KL WH + P +YT   DG++ +WDARSG L ++++GH++MILD  + + +G +  ++T SDD T ++F
Sbjct:   47 NEADVSAEIVDDARLVFRGHTGPVYAISVHPLDKNIILSGGGDDVGLIW-------------SMEDLSVKHVLKGHTDSVVAVGFSFDGMLAATGGYDGIVKVWNVQTGALLHTLDGPSQEIEWIKWHSKGNVLLAGSGDGTAWMWLAATGECMHVFAGHEDSITCGSFTGSGKMIATGSADCTVRLWNPKTGECAHVFRGNEFHEGPICNVICHPKQ-PVMISCSQDGSARLLHIQNKRQLATFSHATNEA-------------------AAGTIAA--DDSMAVNSVEWCV-TATHCLTHFDCSAGFCNTLNWCATADLGGELRIWDLATYQCRHICRHEA--GVIKLMWHPTEPFVYTCTVDGMIHIWDARSGQLQRSLSGHQEMILDMDLITRNGALADLITASDDETVRIF 424          
BLAST of EWM23368.1 vs. NCBI_GenBank
Match: gi|695463264|ref|XP_009538671.1| (hypothetical protein PHYSODRAFT_551235 [Phytophthora sojae] >gi|348665982|gb|EGZ05810.1| hypothetical protein PHYSODRAFT_551235 [Phytophthora sojae])

HSP 1 Score: 347.821 bits (891), Expect = 3.572e-112
Identity = 208/499 (41.68%), Postives = 277/499 (55.51%), Query Frame = 0
Query:    7 NRTQETVLEGEDGPLMILAEDVLEEFEVDDEAPPLESEDESEDESEGIEEHEGNIKLPSGMRLVAEYANGDMEVLGEEGEAGLPTSVADMAVLSFRGHKGPIYAVAINPRDSRSMLTGGGDDRAFFWETTAAAPSVNTSTSMPGLGAVKESEDHGESVNAVGYSHDGSLAATGAYSGKVLVWDAKTRGLLQTLEGP-EDVEWLQWHPKGNLLLAGSKDGTVWMWLAVTGECMRVFSGHEDAVTVGMFTSDGKLVVSGSMDGSVRVWGPKAGVCRHVFSGYAFHEGPVTALASHPSDGALLLSGGMDGTARLLHAAGKRVLASMVHSEPTAVGNGGGGASVNGRGKEGGKSEGGVAPMEEDGTGPGTEEGVAGEEVHEGNYSVETVGFSSVLNWCATGGMDGTMKIWDLGNFSCRHVCVHPGLPGVTKLQWHASLPLIYTAATDGVLRLWDARSGALLQAMTGHEDMILDFAVHSADGHMDV--VLTGSDDGTAKVFWVD 502
            N  +ET +E      +I AE+  +EF++  EAP    +D+ ED  E +++                    D ++  E+ +      V D A + F  H GP+Y+V +NP D R ++TGGGDD A  W         N   ++ G         H +SV +V +S DG  AATG Y G V +WD  T  L+Q LEGP ++VEW+ WH KGN++LAGS DGTVWMWLA TGECM VF+GHED VT G FT  GK++V+GS D +VRVW PK G C HVF G+ FHEG VT +ASHPS   L+LSG  DGTARL+    KRVLA++ H         G  AS+ G   +               T   TE             SVE  GF + +NW ATG + G ++IWDL    CRHVC HP   GV KL WH +LP++Y++  +G+L +WDAR+G L++ + GH DM+LD     A     V  +LT SDD + ++F VD
Sbjct:    5 NAPEETEIE------VITAEETTQEFDIG-EAP----QDDDEDAMEDVDD--------------------DGKISAEDAD------VRDDAEMVFNKHSGPVYSVKVNPVDPRIVITGGGDDVAVIWNREDG----NVLYTLSG---------HQDSVVSVDFSFDGKYAATGGYDGVVKIWDVATGNLVQNLEGPSQEVEWVCWHKKGNVVLAGSGDGTVWMWLATTGECMHVFAGHEDGVTCGSFTGSGKMIVTGSTDATVRVWNPKTGECNHVFRGHGFHEGHVTFVASHPSQ-PLVLSGSQDGTARLIQIQTKRVLATLSHD--------GVDASIAGTVND---------------TSTSTEN------------SVECGGFCNTMNWAATGCLGGYLRIWDLATNQCRHVCRHPA--GVIKLLWHHTLPIVYSSTVEGLLYVWDARTGQLMKTLAGHTDMVLDMTFIPAFEGNPVAGLLTASDDESVRLFRVD 415          
BLAST of EWM23368.1 vs. NCBI_GenBank
Match: gi|813148694|ref|XP_012199994.1| (hypothetical protein SPRG_06038 [Saprolegnia parasitica CBS 223.65] >gi|641535588|gb|KDO29498.1| hypothetical protein SPRG_06038 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 346.665 bits (888), Expect = 8.585e-112
Identity = 193/472 (40.89%), Postives = 264/472 (55.93%), Query Frame = 0
Query:   37 EAPPLESEDESEDESEGIEEHEGNIKLPSGMRLVAEYANGDM--------EVLGEEGEAGLPTSVADMAVLSFRGHKGPIYAVAINPRDSRSMLTGGGDDRAFFWETTAAAPSVNTSTSMPGLGAVKESEDHGESVNAVGYSHDGSLAATGAYSGKVLVWDAKTRGLLQTLEGP-EDVEWLQWHPKGNLLLAGSKDGTVWMWLAVTGECMRVFSGHEDAVTVGMFTSDGKLVVSGSMDGSVRVWGPKAGVCRHVFSGYAFHEGPVTALASHPSDGALLLSGGMDGTARLLHAAGKRVLASMVHSEPTAVGNGGGGASVNGRGKEGGKSEGGVAPMEEDGTGPGTEEGVAGEEVHEGNYSVETVGFSSVLNWCATGGMDGTMKIWDLGNFSCRHVCVHPGLPGVTKLQWHASLPLIYTAATDGVLRLWDARSGALLQAMTGHEDMILDFAVHSADGHMDVVLTGSDDGTAKVF 499
            +A  LE+ED   ++ E I E E          +  EY  GD+            ++GEA +   + D A + FRGH GP+YA++++P D   +L+GGGDD    W             S+  L      + H +SV AVG+S DG LAATG Y G V VW+ +T  LL TL+GP +++EW++WH KGN+LLAGS DGT WMWLA TGECM VF+GHED++T G FT  GK++ +GS D +VR+W PK G C HVF G  FHEGP+  +  HP    +++S   DGTARLLH   KR LA   H+   A                                  GT   +A ++    N SVE  GF + LNWCAT  + G ++IWDL  + CRHVC H    GV KL WH + P +YT   DG++ +WDARSG L ++++GH++MILD  +   +G +  ++T SDD T ++F
Sbjct:    2 DARHLETEDVLLEDEEMILEDE----------VTEEYELGDVPDEDDDMEVDGDDDGEADVSAEIVDDARMVFRGHNGPVYAISVHPLDKNIVLSGGGDDVGLIW-------------SIEDLSIKHVLKGHTDSVVAVGFSCDGVLAATGGYDGIVKVWNVQTGALLHTLDGPSQEIEWIKWHAKGNVLLAGSGDGTAWMWLAATGECMHVFAGHEDSITCGSFTGSGKMIATGSADCTVRLWNPKTGECAHVFRGNEFHEGPICNVLCHPKQ-PVMISCSQDGTARLLHIQNKRQLAVFSHATNEA--------------------------------AAGT---IAADDSMAVN-SVECAGFCNTLNWCATADLGGELRIWDLATYQCRHVCRHEA--GVIKLMWHPTEPFVYTCTVDGMIHVWDARSGQLQRSLSGHQEMILDMDLIVRNGMLADLVTASDDETVRIF 411          
BLAST of EWM23368.1 vs. NCBI_GenBank
Match: gi|669169583|ref|XP_008620140.1| (hypothetical protein SDRG_15736 [Saprolegnia diclina VS20] >gi|530728149|gb|EQC26391.1| hypothetical protein SDRG_15736 [Saprolegnia diclina VS20])

HSP 1 Score: 346.28 bits (887), Expect = 1.174e-111
Identity = 179/416 (43.03%), Postives = 242/416 (58.17%), Query Frame = 0
Query:   85 GEAGLPTSVADMAVLSFRGHKGPIYAVAINPRDSRSMLTGGGDDRAFFWETTAAAPSVNTSTSMPGLGAVKESEDHGESVNAVGYSHDGSLAATGAYSGKVLVWDAKTRGLLQTLEGP-EDVEWLQWHPKGNLLLAGSKDGTVWMWLAVTGECMRVFSGHEDAVTVGMFTSDGKLVVSGSMDGSVRVWGPKAGVCRHVFSGYAFHEGPVTALASHPSDGALLLSGGMDGTARLLHAAGKRVLASMVHSEPTAVGNGGGGASVNGRGKEGGKSEGGVAPMEEDGTGPGTEEGVAGEEVHEGNYSVETVGFSSVLNWCATGGMDGTMKIWDLGNFSCRHVCVHPGLPGVTKLQWHASLPLIYTAATDGVLRLWDARSGALLQAMTGHEDMILDFAVHSADGHMDVVLTGSDDGTAKVF 499
            GEA +   + D A + F GH GP+YA++++P D   +L+GGGDD    W             S+  L      + H +SV AVG+S DG LAATG Y G V VW+ +T  LL TL+GP +++EW++WH KGN+LLAGS DGT WMWLA TGECM VF+GHED++T G FT  GK++ +GS D +VR+W PK G C HVF G  FHEGP+  +  HP    +++S   DGTARLLH   KR LA   H+   A                                  GT   +A ++    N SVE  GF + LNWCAT  + G ++IWDL  + CRHVC H    GV KL WH + P +YT   DG++ +WDARSG L ++++GH++MILD  +   +G +  ++T SDD T ++F
Sbjct:   49 GEADVSAEIVDDARMVFHGHNGPVYAISVHPLDKNIVLSGGGDDVGLIW-------------SIEDLSIKHVLKGHTDSVVAVGFSCDGVLAATGGYDGIVKVWNVQTGALLHTLDGPSQEIEWIKWHAKGNVLLAGSGDGTAWMWLAATGECMHVFAGHEDSITCGSFTGSGKMIATGSADCTVRLWNPKTGECAHVFRGNEFHEGPICNVLCHPKQ-PVMISCSQDGTARLLHIQNKRQLAVFSHATNEA--------------------------------AAGT---IAADDSMAVN-SVECAGFCNTLNWCATADLGGELRIWDLATYQCRHVCRHEA--GVIKLMWHPTEPFVYTCTVDGMIHVWDARSGQLQRSLSGHQEMILDMDLIVRNGQLADLVTASDDETVRIF 412          
BLAST of EWM23368.1 vs. NCBI_GenBank
Match: gi|1173959386|gb|OQS05627.1| (angio-associated migratory cell protein [Thraustotheca clavata])

HSP 1 Score: 342.428 bits (877), Expect = 3.665e-110
Identity = 178/416 (42.79%), Postives = 241/416 (57.93%), Query Frame = 0
Query:   85 GEAGLPTSVADMAVLSFRGHKGPIYAVAINPRDSRSMLTGGGDDRAFFWETTAAAPSVNTSTSMPGLGAVKESEDHGESVNAVGYSHDGSLAATGAYSGKVLVWDAKTRGLLQTLEGP-EDVEWLQWHPKGNLLLAGSKDGTVWMWLAVTGECMRVFSGHEDAVTVGMFTSDGKLVVSGSMDGSVRVWGPKAGVCRHVFSGYAFHEGPVTALASHPSDGALLLSGGMDGTARLLHAAGKRVLASMVHSEPTAVGNGGGGASVNGRGKEGGKSEGGVAPMEEDGTGPGTEEGVAGEEVHEGNYSVETVGFSSVLNWCATGGMDGTMKIWDLGNFSCRHVCVHPGLPGVTKLQWHASLPLIYTAATDGVLRLWDARSGALLQAMTGHEDMILDFAVHSADGHMDVVLTGSDDGTAKVF 499
             EA +   + D A   FRGH GP+YA++I+P D   +L+GGGDD    W             SM         + H +SV AVG+S DG LAATG Y G V +W+ +T  LL TL+GP +++EW++WH KGN++LAGS DGT WMWLA TGECM VF+GHED+VT G F+  GK++V+GS D +VR+W PK G C  VF G  FHEGP+  +  HP    +++S   DGTARLLH   KR LA+  H+   A                   S G VA  E+D                    SVE  GF + LNWCAT  + G ++IWDL ++ CRH+C H    GV KL WH + P +YT   DG++ +WDAR+G L ++++GH +MILD  +   +G +  ++T SDD T ++F
Sbjct:   46 AEADVTAEIVDDARSVFRGHTGPVYAISIHPLDKNIVLSGGGDDVGLIW-------------SMEDNSIKHVLKGHTDSVVAVGFSFDGVLAATGGYDGIVKIWNVQTGALLHTLDGPSQEIEWIKWHSKGNVVLAGSGDGTAWMWLAATGECMHVFAGHEDSVTCGSFSGSGKMIVTGSSDCTVRLWNPKTGECSFVFRGQEFHEGPICNVICHPKQ-PVMISCSQDGTARLLHIQNKRQLAAFSHAVNEA-------------------SSGTVA--EDDSMAVN---------------SVECAGFCNTLNWCATADLGGELRIWDLASYQCRHICRHEA--GVIKLMWHPTEPFVYTCTVDGMIHVWDARNGQLQRSLSGHSEMILDMDLIVRNGFLTELVTASDDETVRIF 409          
BLAST of EWM23368.1 vs. NCBI_GenBank
Match: gi|698803608|ref|XP_009834833.1| (hypothetical protein H257_10086 [Aphanomyces astaci] >gi|574110202|gb|ETV75702.1| hypothetical protein H257_10086 [Aphanomyces astaci])

HSP 1 Score: 338.961 bits (868), Expect = 8.708e-109
Identity = 179/415 (43.13%), Postives = 236/415 (56.87%), Query Frame = 0
Query:   86 EAGLPTSVADMAVLSFRGHKGPIYAVAINPRDSRSMLTGGGDDRAFFWETTAAAPSVNTSTSMPGLGAVKESEDHGESVNAVGYSHDGSLAATGAYSGKVLVWDAKTRGLLQTLEGP-EDVEWLQWHPKGNLLLAGSKDGTVWMWLAVTGECMRVFSGHEDAVTVGMFTSDGKLVVSGSMDGSVRVWGPKAGVCRHVFSGYAFHEGPVTALASHPSDGALLLSGGMDGTARLLHAAGKRVLASMVHSEPTAVGNGGGGASVNGRGKEGGKSEGGVAPMEEDGTGPGTEEGVAGEEVHEGNYSVETVGFSSVLNWCATGGMDGTMKIWDLGNFSCRHVCVHPGLPGVTKLQWHASLPLIYTAATDGVLRLWDARSGALLQAMTGHEDMILDFAVHSADGHMDVVLTGSDDGTAKVF 499
            EA +   V D A   FRGH GP+YA+A++P D   +L+GGGDD    W             S+  L      + H +SV AVG+S DGS AATG Y G V +W  +T  L+ TL+GP +++EW++WH KGN++LAGS DGT WMWLA TGECM VF+GHED+VT G FT  GK++V+GS D +VR+W PK G C HVF G+ FHEGP+  +  HP    +++S   DGTARLL   GKR LA  VH           G + + RG       G V+                         SVE  GF + LNW ATG + G ++IWDL  + CRH+C H    GV KL WH + P ++T  TDGV+ +WDAR+G L +  TGH +MIL        G    ++T S+D T ++F
Sbjct:   47 EAEVTAEVVDDARQVFRGHSGPVYALALHPLDKSIVLSGGGDDVGLIW-------------SLDDLSVKHVLKGHEDSVVAVGFSCDGSFAATGGYDGVVKIWVVQTGALVHTLDGPSQEIEWIKWHNKGNVILAGSADGTAWMWLAATGECMHVFAGHEDSVTCGAFTGSGKMIVTGSADATVRLWNPKTGECNHVFRGHEFHEGPICDVVCHPKQ-PVMISCAQDGTARLLQLQGKRQLAVFVH-----------GVTESNRGTVADDEGGAVS-------------------------SVECAGFCNTLNWAATGDLGGELRIWDLATYQCRHICRHDA--GVIKLLWHPTEPFVFTVTTDGVIHVWDARTGQLQKRFTGHSEMILGAEFVVRQGVTSDLVTASEDETVRIF 409          
BLAST of EWM23368.1 vs. NCBI_GenBank
Match: gi|568011117|gb|ETL85295.1| (hypothetical protein L917_15089 [Phytophthora parasitica] >gi|568041023|gb|ETM38447.1| hypothetical protein L914_15226 [Phytophthora parasitica])

HSP 1 Score: 338.191 bits (866), Expect = 2.397e-108
Identity = 182/413 (44.07%), Postives = 239/413 (57.87%), Query Frame = 0
Query:   93 VADMAVLSFRGHKGPIYAVAINPRDSRSMLTGGGDDRAFFWETTAAAPSVNTSTSMPGLGAVKESEDHGESVNAVGYSHDGSLAATGAYSGKVLVWDAKTRGLLQTLEGP-EDVEWLQWHPKGNLLLAGSKDGTVWMWLAVTGECMRVFSGHEDAVTVGMFTSDGKLVVSGSMDGSVRVWGPKAGVCRHVFSGYAFHEGPVTALASHPSDGALLLSGGMDGTARLLHAAGKRVLASMVHSEPTAVGNGGGGASVNGRGKEGGKSEGGVAPMEEDGTGPGTEEGVAGEEVHEGNYSVETVGFSSVLNWCATGGMDGTMKIWDLGNFSCRHVCVHPGLPGVTKLQWHASLPLIYTAATDGVLRLWDARSGALLQAMTGHEDMILDFA-VHSADGH-MDVVLTGSDDGTAKVFWVD 502
            V D A + F  H GPIY++ +NP D R ++TGGGDD    W         N   ++ G         H +SV +V +S DG  AATG Y G V VW+  T  L+Q LEGP ++VEW+ WH KGN++LAGS DGTVWMWLA TGECM VF+GHED VT G FT  GK++V+GS D +VRVW PK G C HVF G+ FHEGPVT +A HP+   L LSG  DGTARL+    KRVLA++ H                                  DG  P    G   +       S E  GF + +NW ATG + G ++IWDL  + CRHVC HP   GV KL WH + P++Y+   +G++ +WDAR+G LL+ + GH DM+LD   + + +G+ +  +LT SDD + ++F VD
Sbjct:   56 VRDDAEMVFNKHSGPIYSIKVNPVDPRIVITGGGDDVGVIWNREDG----NVLYTLSG---------HQDSVVSVDFSFDGKYAATGGYDGVVKVWEVATGNLVQNLEGPSQEVEWVCWHKKGNVVLAGSGDGTVWMWLATTGECMHVFAGHEDGVTCGSFTGSGKMIVTGSTDTTVRVWNPKTGECNHVFRGHDFHEGPVTFIACHPTQ-PLALSGSQDGTARLIQVQTKRVLATLSH----------------------------------DGVDPSV-AGTVNDTTTSTENSAECGGFCNTMNWAATGCLGGYLRIWDLTTYQCRHVCRHPA--GVIKLLWHPTQPIVYSCTVEGLIYVWDARTGLLLKTLAGHTDMVLDMTFIPAFEGNPIAGLLTASDDESVRLFRVD 417          
BLAST of EWM23368.1 vs. NCBI_GenBank
Match: gi|570973827|gb|ETP36352.1| (hypothetical protein F442_15658 [Phytophthora parasitica P10297])

HSP 1 Score: 338.961 bits (868), Expect = 3.458e-108
Identity = 181/413 (43.83%), Postives = 239/413 (57.87%), Query Frame = 0
Query:   93 VADMAVLSFRGHKGPIYAVAINPRDSRSMLTGGGDDRAFFWETTAAAPSVNTSTSMPGLGAVKESEDHGESVNAVGYSHDGSLAATGAYSGKVLVWDAKTRGLLQTLEGP-EDVEWLQWHPKGNLLLAGSKDGTVWMWLAVTGECMRVFSGHEDAVTVGMFTSDGKLVVSGSMDGSVRVWGPKAGVCRHVFSGYAFHEGPVTALASHPSDGALLLSGGMDGTARLLHAAGKRVLASMVHSEPTAVGNGGGGASVNGRGKEGGKSEGGVAPMEEDGTGPGTEEGVAGEEVHEGNYSVETVGFSSVLNWCATGGMDGTMKIWDLGNFSCRHVCVHPGLPGVTKLQWHASLPLIYTAATDGVLRLWDARSGALLQAMTGHEDMILDFA-VHSADGH-MDVVLTGSDDGTAKVFWVD 502
            V D A + F  H GP+Y++ +NP D R ++TGGGDD    W         N   ++ G         H +SV +V +S DG  AATG Y G V VW+  T  L+Q LEGP ++VEW+ WH KGN++LAGS DGTVWMWLA TGECM VF+GHED VT G FT  GK++V+GS D +VRVW PK G C HVF G+ FHEGPVT +A HP+   L LSG  DGTARL+    KRVLA++ H                                  DG  P    G   +       S E  GF + +NW ATG + G ++IWDL  + CRHVC HP   GV KL WH + P++Y+   +G++ +WDAR+G LL+ + GH DM+LD   + + +G+ +  +LT SDD + ++F VD
Sbjct:   56 VRDDAEMVFNKHSGPVYSIKVNPVDPRIVITGGGDDVGVIWNREDG----NVLYTLSG---------HQDSVVSVDFSFDGKYAATGGYDGVVKVWEVATGNLVQNLEGPSQEVEWVCWHKKGNVVLAGSGDGTVWMWLATTGECMHVFAGHEDGVTCGSFTGSGKMIVTGSTDTTVRVWNPKTGECNHVFRGHDFHEGPVTFIACHPTQ-PLALSGSQDGTARLIQVQTKRVLATLSH----------------------------------DGVDPSV-AGTVNDTTTSTENSAECGGFCNTMNWAATGCLGGYLRIWDLTTYQCRHVCRHPA--GVIKLLWHPTQPIVYSCTVEGLIYVWDARTGLLLKTLAGHTDMVLDMTFIPAFEGNPIAGLLTASDDESVRLFRVD 417          
BLAST of EWM23368.1 vs. NCBI_GenBank
Match: gi|675173019|ref|XP_008895394.1| (hypothetical protein PPTG_04838 [Phytophthora parasitica INRA-310] >gi|566015503|gb|ETI38414.1| hypothetical protein F443_15817 [Phytophthora parasitica P1569] >gi|567952953|gb|ETK78616.1| hypothetical protein L915_15373 [Phytophthora parasitica] >gi|567981610|gb|ETL32047.1| hypothetical protein L916_15267 [Phytophthora parasitica] >gi|568104916|gb|ETN19561.1| hypothetical protein PPTG_04838 [Phytophthora parasitica INRA-310] >gi|570319239|gb|ETO67187.1| hypothetical protein F444_15797 [Phytophthora parasitica P1976] >gi|570943041|gb|ETP08298.1| hypothetical protein F441_15650 [Phytophthora parasitica CJ01A1] >gi|970630890|gb|KUF77695.1| Angio-associated migratory cell protein [Phytophthora nicotianae])

HSP 1 Score: 337.421 bits (864), Expect = 5.164e-108
Identity = 181/413 (43.83%), Postives = 239/413 (57.87%), Query Frame = 0
Query:   93 VADMAVLSFRGHKGPIYAVAINPRDSRSMLTGGGDDRAFFWETTAAAPSVNTSTSMPGLGAVKESEDHGESVNAVGYSHDGSLAATGAYSGKVLVWDAKTRGLLQTLEGP-EDVEWLQWHPKGNLLLAGSKDGTVWMWLAVTGECMRVFSGHEDAVTVGMFTSDGKLVVSGSMDGSVRVWGPKAGVCRHVFSGYAFHEGPVTALASHPSDGALLLSGGMDGTARLLHAAGKRVLASMVHSEPTAVGNGGGGASVNGRGKEGGKSEGGVAPMEEDGTGPGTEEGVAGEEVHEGNYSVETVGFSSVLNWCATGGMDGTMKIWDLGNFSCRHVCVHPGLPGVTKLQWHASLPLIYTAATDGVLRLWDARSGALLQAMTGHEDMILDFA-VHSADGH-MDVVLTGSDDGTAKVFWVD 502
            V D A + F  H GP+Y++ +NP D R ++TGGGDD    W         N   ++ G         H +SV +V +S DG  AATG Y G V VW+  T  L+Q LEGP ++VEW+ WH KGN++LAGS DGTVWMWLA TGECM VF+GHED VT G FT  GK++V+GS D +VRVW PK G C HVF G+ FHEGPVT +A HP+   L LSG  DGTARL+    KRVLA++ H                                  DG  P    G   +       S E  GF + +NW ATG + G ++IWDL  + CRHVC HP   GV KL WH + P++Y+   +G++ +WDAR+G LL+ + GH DM+LD   + + +G+ +  +LT SDD + ++F VD
Sbjct:   56 VRDDAEMVFNKHSGPVYSIKVNPVDPRIVITGGGDDVGVIWNREDG----NVLYTLSG---------HQDSVVSVDFSFDGKYAATGGYDGVVKVWEVATGNLVQNLEGPSQEVEWVCWHKKGNVVLAGSGDGTVWMWLATTGECMHVFAGHEDGVTCGSFTGSGKMIVTGSTDTTVRVWNPKTGECNHVFRGHDFHEGPVTFIACHPTQ-PLALSGSQDGTARLIQVQTKRVLATLSH----------------------------------DGVDPSV-AGTVNDTTTSTENSAECGGFCNTMNWAATGCLGGYLRIWDLTTYQCRHVCRHPA--GVIKLLWHPTQPIVYSCTVEGLIYVWDARTGLLLKTLAGHTDMVLDMTFIPAFEGNPIAGLLTASDDESVRLFRVD 417          
The following BLAST results are available for this feature:
BLAST of EWM23368.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104376|gb|EWM23368.1|0.000e+0100.00WD40 repeat containing protein [Nannochloropsis ga... [more]
gi|1173933120|gb|OQR84987.1|2.070e-11242.55angio-associated migratory cell protein [Achlya hy... [more]
gi|695463264|ref|XP_009538671.1|3.572e-11241.68hypothetical protein PHYSODRAFT_551235 [Phytophtho... [more]
gi|813148694|ref|XP_012199994.1|8.585e-11240.89hypothetical protein SPRG_06038 [Saprolegnia paras... [more]
gi|669169583|ref|XP_008620140.1|1.174e-11143.03hypothetical protein SDRG_15736 [Saprolegnia dicli... [more]
gi|1173959386|gb|OQS05627.1|3.665e-11042.79angio-associated migratory cell protein [Thraustot... [more]
gi|698803608|ref|XP_009834833.1|8.708e-10943.13hypothetical protein H257_10086 [Aphanomyces astac... [more]
gi|568011117|gb|ETL85295.1|2.397e-10844.07hypothetical protein L917_15089 [Phytophthora para... [more]
gi|570973827|gb|ETP36352.1|3.458e-10843.83hypothetical protein F442_15658 [Phytophthora para... [more]
gi|675173019|ref|XP_008895394.1|5.164e-10843.83hypothetical protein PPTG_04838 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7320rna7320Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications