EWM23381.1, cds7295 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23381.1 vs. NCBI_GenBank
Match: gi|585104390|gb|EWM23381.1| (hypothetical protein Naga_100472g4 [Nannochloropsis gaditana]) HSP 1 Score: 1448.72 bits (3749), Expect = 0.000e+0 Identity = 755/755 (100.00%), Postives = 755/755 (100.00%), Query Frame = 0
Query: 1 MPWWRASTALLLLPMASVLAFIPSAPPLESSWRRASLPLKHSCRRFSLPSLFPRALPTSSSSPSSFASSSFFSSSFTSSSDSHVTPNPPIPSSPPGGEGNFFSLRRLRAALAALRETGSAGLLAYGIVNALYYTVAITIIWLCVDGDVEPLLSPSALGATAAAAGTGKAAMSAATSAPSLRLLSTRFLKVVAMAWAGSQVTKPLRVGGAILLAPAVSRLMGYTERKLQLRSKRQTLAVLLAALMVFPTLVFAGLLIKAGAWEAAAPMVGGWGEGLKEALGRGSPAVGSRGNGGGQGPGGRVSAFASCRLGGGEGGRLWKRLRVGRVGSRLPINKSASSAPLFASLLLPAPSTLAFLQPPCPLPSFPPSFPPSLSSAPLGAGTSIRREGSCPPPVSLSFPSSSFPSSSSSFPSPRPSPSLPPSPDSPPPKRVRRKRLQRLAKRRRASDPARTKRRPRQQYLPPNPNVHGWDQHPDYLRGKWTLRSLSFRPPPSDPTAHADSPSDAGGADTGEGPSLPPSPSALDVGPPPPPSLPPSVLAGLEMGCKSLVLKGKSVLLLREGMGQLSPLGWEFTPANRRVVFEVASPSLSPPGSMPGSSPGPSGPGEGEGEGRRLVWRFSGEVRRKPKHWCRVTGTVRVRLAPLPTSSPSSPTSHGEAGPSGERDGQAPPRRRSIPSTKASWPVVASFELEKAMAPFQSLNTWEKLLVWARLEADPNSKAGRRAKASVVRGPEGGGKEVGEEGEAAKEGRETGPSSL 755
MPWWRASTALLLLPMASVLAFIPSAPPLESSWRRASLPLKHSCRRFSLPSLFPRALPTSSSSPSSFASSSFFSSSFTSSSDSHVTPNPPIPSSPPGGEGNFFSLRRLRAALAALRETGSAGLLAYGIVNALYYTVAITIIWLCVDGDVEPLLSPSALGATAAAAGTGKAAMSAATSAPSLRLLSTRFLKVVAMAWAGSQVTKPLRVGGAILLAPAVSRLMGYTERKLQLRSKRQTLAVLLAALMVFPTLVFAGLLIKAGAWEAAAPMVGGWGEGLKEALGRGSPAVGSRGNGGGQGPGGRVSAFASCRLGGGEGGRLWKRLRVGRVGSRLPINKSASSAPLFASLLLPAPSTLAFLQPPCPLPSFPPSFPPSLSSAPLGAGTSIRREGSCPPPVSLSFPSSSFPSSSSSFPSPRPSPSLPPSPDSPPPKRVRRKRLQRLAKRRRASDPARTKRRPRQQYLPPNPNVHGWDQHPDYLRGKWTLRSLSFRPPPSDPTAHADSPSDAGGADTGEGPSLPPSPSALDVGPPPPPSLPPSVLAGLEMGCKSLVLKGKSVLLLREGMGQLSPLGWEFTPANRRVVFEVASPSLSPPGSMPGSSPGPSGPGEGEGEGRRLVWRFSGEVRRKPKHWCRVTGTVRVRLAPLPTSSPSSPTSHGEAGPSGERDGQAPPRRRSIPSTKASWPVVASFELEKAMAPFQSLNTWEKLLVWARLEADPNSKAGRRAKASVVRGPEGGGKEVGEEGEAAKEGRETGPSSL
Sbjct: 1 MPWWRASTALLLLPMASVLAFIPSAPPLESSWRRASLPLKHSCRRFSLPSLFPRALPTSSSSPSSFASSSFFSSSFTSSSDSHVTPNPPIPSSPPGGEGNFFSLRRLRAALAALRETGSAGLLAYGIVNALYYTVAITIIWLCVDGDVEPLLSPSALGATAAAAGTGKAAMSAATSAPSLRLLSTRFLKVVAMAWAGSQVTKPLRVGGAILLAPAVSRLMGYTERKLQLRSKRQTLAVLLAALMVFPTLVFAGLLIKAGAWEAAAPMVGGWGEGLKEALGRGSPAVGSRGNGGGQGPGGRVSAFASCRLGGGEGGRLWKRLRVGRVGSRLPINKSASSAPLFASLLLPAPSTLAFLQPPCPLPSFPPSFPPSLSSAPLGAGTSIRREGSCPPPVSLSFPSSSFPSSSSSFPSPRPSPSLPPSPDSPPPKRVRRKRLQRLAKRRRASDPARTKRRPRQQYLPPNPNVHGWDQHPDYLRGKWTLRSLSFRPPPSDPTAHADSPSDAGGADTGEGPSLPPSPSALDVGPPPPPSLPPSVLAGLEMGCKSLVLKGKSVLLLREGMGQLSPLGWEFTPANRRVVFEVASPSLSPPGSMPGSSPGPSGPGEGEGEGRRLVWRFSGEVRRKPKHWCRVTGTVRVRLAPLPTSSPSSPTSHGEAGPSGERDGQAPPRRRSIPSTKASWPVVASFELEKAMAPFQSLNTWEKLLVWARLEADPNSKAGRRAKASVVRGPEGGGKEVGEEGEAAKEGRETGPSSL 755
BLAST of EWM23381.1 vs. NCBI_GenBank
Match: gi|1190976080|ref|XP_020883843.1| (uncharacterized protein LOC9317677 [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 85.1149 bits (209), Expect = 4.152e-15 Identity = 70/222 (31.53%), Postives = 98/222 (44.14%), Query Frame = 0
Query: 42 SCRRFSLPSLFPRALPTSSSSPSSFASSSFFSSSFTSSSDSHVTPNP-PIPSSPPGGEGNFFSLRRL--------RAALAALRETGSAGLLAYGIVNALYYTVAITIIWLCVDGDVEPLLSPSALGATAAAAGTGKAAMSAATSAPSLRLLSTRFLKVVAMAWAGSQVTKPLRVGGAILLAPAVSRLMGYTERKLQLRSKRQTLAVLLA-----ALMVFPTL 249
S R FS+P+ S P SF+ TS S +H N S P EG R+ L L+ G +G+L+YGI+N +YY+ A ++W V P +P +G AAA RFLKV+AM WAGSQVTK +R+GGA+ LAP V R + + K + S+ + L+ ALM+F +
Sbjct: 17 SLRTFSIPA------NGQSLLPYSFSVVHHSHRLVTSFSHNHNATNKSDAESKPSYDEGEMLDKNRISRRNPFVSEKLLKKLKRYGVSGILSYGILNTVYYSKAFLLVWF----YVAP--APGKMGYLAAA---------------------ERFLKVMAMVWAGSQVTKLIRIGGAVALAPIVDRGLSWFTVKCKFESQGKAFGALVGICLGLALMLFVVV 205
BLAST of EWM23381.1 vs. NCBI_GenBank
Match: gi|297325600|gb|EFH56020.1| (predicted protein [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 83.5741 bits (205), Expect = 9.566e-15 Identity = 66/208 (31.73%), Postives = 93/208 (44.71%), Query Frame = 0
Query: 55 ALPTSSSSPSSFASSSFFSSSFTSSSDSHVTPNPPIPSSPPGGEGNFFSLRRL--------RAALAALRETGSAGLLAYGIVNALYYTVAITIIWLCVDGDVEPLLSPSALGATAAAAGTGKAAMSAATSAPSLRLLSTRFLKVVAMAWAGSQVTKPLRVGGAILLAPAVSRLMGYTERKLQLRSKRQTLAVLLA-----ALMVFPTL 249
+LP S P SF S S +S + T S P EG R+ L L+ G +G+L+YGI+N +YY+ A ++W V P +P +G AAA RFLKV+AM WAGSQVTK +R+GGA+ LAP V R + + K + S+ + L+ ALM+F +
Sbjct: 12 SLPPQSLLPYSF-SVVHHSHRLVTSFSHNATNKSDAESKPSYDEGEMLDKNRISRRNPFVSEKLLKKLKRYGVSGILSYGILNTVYYSKAFLLVWFYV----AP--APGKMGYLAAA---------------------ERFLKVMAMVWAGSQVTKLIRIGGAVALAPIVDRGLSWFTVKCKFESQGKAFGALVGICLGLALMLFVVV 191
BLAST of EWM23381.1 vs. NCBI_GenBank
Match: gi|729401619|ref|XP_010554492.1| (PREDICTED: uncharacterized protein LOC104824199 isoform X3 [Tarenaya hassleriana]) HSP 1 Score: 81.6481 bits (200), Expect = 1.361e-14 Identity = 47/141 (33.33%), Postives = 73/141 (51.77%), Query Frame = 0
Query: 111 LAALRETGSAGLLAYGIVNALYYTVAITIIWLCVDGDVEPLLSPSALGATAAAAGTGKAAMSAATSAPSLRLLSTRFLKVVAMAWAGSQVTKPLRVGGAILLAPAVSRLMGYTERKLQLRSKRQTLAVLLAALMVFPTLVF 251
L L++ G +G+L+YG++N +YYT+A ++W V P +P +G AA RFLKV+AM WAGSQVTK +R GGA+ LAP V R + + K + S+ + ++ + F ++F
Sbjct: 25 LEKLKKYGISGVLSYGLLNTVYYTIAFLLVWFYV----AP--APGRMGYVAAVE---------------------RFLKVMAMVWAGSQVTKLIRAGGALALAPFVDRGLTWFTLKFKFESQGKAFMAIVGVCLGFAVMLF 138
BLAST of EWM23381.1 vs. NCBI_GenBank
Match: gi|1032294390|gb|OAP08716.1| (hypothetical protein AXX17_AT2G35570 [Arabidopsis thaliana]) HSP 1 Score: 82.8037 bits (203), Expect = 3.071e-14 Identity = 75/233 (32.19%), Postives = 104/233 (44.64%), Query Frame = 0
Query: 33 RRASLPL--KHSCRRFSLPSLFPRALPTSSSSPSSFASSSFFSSSFTSSSDSH-VTPNPPIPSSPPGGEGNFFSLRRL--------RAALAALRETGSAGLLAYGIVNALYYTVAITIIWLCVDGDVEPLLSPSALGATAAAAGTGKAAMSAATSAPSLRLLSTRFLKVVAMAWAGSQVTKPLRVGGAILLAPAVSRLMGYTERKLQLRSKRQTLAVLL-----AALMVFPTL 249
R SLPL K S R FS+ + R T S P F S F S +S SH V+ + EG R+ L L+ G +G+L+YG++N +YY+ A ++W V P +P +G AAA RFLKV+AM WAGSQVTK +R+GGA+ LAP V R + + K S+ + L+ ALM+F +
Sbjct: 7 HRFSLPLPPKCSLRTFSVLANGKR---TQSLLPHHF--SVFNQSHRLVTSLSHNVSNKSDAEAERSCDEGEMLDKNRISKKNPFVSEELLKKLKRYGLSGILSYGLLNTVYYSTAFLLVWF----YVAP--APGKMGYLAAA---------------------ERFLKVMAMVWAGSQVTKLIRIGGAVALAPIVDRGLSWFTVKCNFESQGKAFGALVGICLGVALMLFIVV 207
BLAST of EWM23381.1 vs. NCBI_GenBank
Match: gi|901814989|gb|KMZ69346.1| (hypothetical protein ZOSMA_216G00160 [Zostera marina]) HSP 1 Score: 82.8037 bits (203), Expect = 3.163e-14 Identity = 47/138 (34.06%), Postives = 71/138 (51.45%), Query Frame = 0
Query: 114 LRETGSAGLLAYGIVNALYYTVAITIIWLCVDGDVEPLLSPSALGATAAAAGTGKAAMSAATSAPSLRLLSTRFLKVVAMAWAGSQVTKPLRVGGAILLAPAVSRLMGYTERKLQLRSKRQTLAVLLAALMVFPTLVF 251
L++ G AG+L+YG++N YY A ++W V P +P+ LG AAA RF+K++AM WAGSQVTK LR+GGA+ LAP V++ + + K + S + ++ + F VF
Sbjct: 99 LKQYGVAGVLSYGLLNTFYYLTAFIVVWFYV----AP--TPAGLGYVAAAE---------------------RFIKIMAMVWAGSQVTKLLRIGGALALAPLVAKGLSWFTTKFKFESTGKAFGFIVGLCITFGISVF 209
BLAST of EWM23381.1 vs. NCBI_GenBank
Match: gi|79603216|ref|NP_973635.2| (Gag-Pol polyprotein/retrotransposon [Arabidopsis thaliana] >gi|49823514|gb|AAT68740.1| hypothetical protein At2g38695 [Arabidopsis thaliana] >gi|55740605|gb|AAV63895.1| hypothetical protein At2g38695 [Arabidopsis thaliana] >gi|330254477|gb|AEC09571.1| Gag-Pol polyprotein/retrotransposon [Arabidopsis thaliana]) HSP 1 Score: 82.4185 bits (202), Expect = 4.129e-14 Identity = 75/233 (32.19%), Postives = 104/233 (44.64%), Query Frame = 0
Query: 33 RRASLPL--KHSCRRFSLPSLFPRALPTSSSSPSSFASSSFFSSSFTSSSDSH-VTPNPPIPSSPPGGEGNFFSLRRL--------RAALAALRETGSAGLLAYGIVNALYYTVAITIIWLCVDGDVEPLLSPSALGATAAAAGTGKAAMSAATSAPSLRLLSTRFLKVVAMAWAGSQVTKPLRVGGAILLAPAVSRLMGYTERKLQLRSKRQTLAVLL-----AALMVFPTL 249
R SLPL K S R FS+ + R T S P F S F S +S SH V+ + EG R+ L L+ G +G+L+YG++N +YY+ A ++W V P +P +G AAA RFLKV+AM WAGSQVTK +R+GGA+ LAP V R + + K S+ + L+ ALM+F +
Sbjct: 7 HRFSLPLPPKCSLRTFSVLANGKR---TQSLLPHHF--SVFNQSHRLVTSLSHNVSNKSDAEAERSCDEGEMLDKNRISKKNPFVSEELLKKLKRYGLSGILSYGLLNTVYYSTAFLLVWF----YVAP--APGKMGYLAAA---------------------ERFLKVMAMVWAGSQVTKLIRIGGAVALAPIVDRGLSWFTVKCNFESQGKAFGALVGICLGMALMLFIVV 207
BLAST of EWM23381.1 vs. NCBI_GenBank
Match: gi|729401613|ref|XP_010554490.1| (PREDICTED: uncharacterized protein LOC104824199 isoform X1 [Tarenaya hassleriana]) HSP 1 Score: 81.6481 bits (200), Expect = 7.516e-14 Identity = 47/142 (33.10%), Postives = 73/142 (51.41%), Query Frame = 0
Query: 110 ALAALRETGSAGLLAYGIVNALYYTVAITIIWLCVDGDVEPLLSPSALGATAAAAGTGKAAMSAATSAPSLRLLSTRFLKVVAMAWAGSQVTKPLRVGGAILLAPAVSRLMGYTERKLQLRSKRQTLAVLLAALMVFPTLVF 251
L L++ G +G+L+YG++N +YYT+A ++W V P +P +G AA RFLKV+AM WAGSQVTK +R GGA+ LAP V R + + K + S+ + ++ + F ++F
Sbjct: 100 VLEKLKKYGISGVLSYGLLNTVYYTIAFLLVWF----YVAP--APGRMGYVAAV---------------------ERFLKVMAMVWAGSQVTKLIRAGGALALAPFVDRGLTWFTLKFKFESQGKAFMAIVGVCLGFAVMLF 214
BLAST of EWM23381.1 vs. NCBI_GenBank
Match: gi|848899566|ref|XP_012849935.1| (PREDICTED: uncharacterized protein LOC105969707 [Erythranthe guttata]) HSP 1 Score: 80.8777 bits (198), Expect = 1.094e-13 Identity = 54/170 (31.76%), Postives = 78/170 (45.88%), Query Frame = 0
Query: 75 SFTSSSDSH-----VTPNPPIPSSPPGGEGNFFSLRRLRAALAALRETGSAGLLAYGIVNALYYTVAITIIWLCVDGDVEPLLSPSALGATAAAAGTGKAAMSAATSAPSLRLLSTRFLKVVAMAWAGSQVTKPLRVGGAILLAPAVSRLMGYTERKLQLRSKRQTLAVL 239
SF +SS++H + G+ FF L+ L L+ G +G+L+YG++N YY ++W V P SP +G AA RFLKV+AM WAGSQVTK +R GGA+ LAP V R + + K +S+ + A +
Sbjct: 46 SFANSSNTHRPESSDFDSSSEEKQGSNGKDKFFQANSLKEILTKLKRYGVSGILSYGLLNTAYYLTTFLVVWFYV----AP--SPGRMGYLAAV---------------------ERFLKVMAMVWAGSQVTKIIRAGGALALAPFVDRGLSWFTLKFGFKSQGKAFATI 188
BLAST of EWM23381.1 vs. NCBI_GenBank
Match: gi|944054794|gb|KQJ90432.1| (hypothetical protein BRADI_4g31470 [Brachypodium distachyon]) HSP 1 Score: 81.2629 bits (199), Expect = 1.378e-13 Identity = 48/146 (32.88%), Postives = 72/146 (49.32%), Query Frame = 0
Query: 111 LAALRETGSAGLLAYGIVNALYYTVAITIIWLCVDGDVEPLLSPSALGATAAAAGTGKAAMSAATSAPSLRLLSTRFLKVVAMAWAGSQVTKPLRVGGAILLAPAVSRLMGYTERKLQLRSKRQTLAVLLAALMVFPTLVFAGLLI 256
L L+ G+AG+L+YG++N +YY ++W + P +P +G AA RF+K++AM WAGSQVTK LR GGA+ LAP V R + + K +S+ + A ++ LVF GL +
Sbjct: 108 LEKLKRYGAAGVLSYGLLNTVYYVTTFLLVWF----HLSP--APGRMGYAAAV---------------------ERFIKLMAMVWAGSQVTKVLRAGGALALAPFVDRGLTWFTVKFNFQSEGKAFATIVGLCFGLAALVFFGLTV 226 The following BLAST results are available for this feature:
BLAST of EWM23381.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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