EWM23379.1, cds7292 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23379.1 vs. NCBI_GenBank
Match: gi|585104388|gb|EWM23379.1| (RNA helicase, DEAD-box type [Nannochloropsis gaditana]) HSP 1 Score: 864.759 bits (2233), Expect = 0.000e+0 Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0
Query: 1 MGKDELSMKEEEKEARERKLRKKAKKESKRAAELLKISEAETAETEVKEPADKLLNGTTNEKQDEQSSILRLSKEERKRAKKEKKKQEKIAAATSHATPLPSTPCTADAPHPLSKSEAQAWWEENEILVSGPGCDAFLPTLSFAGVGFPPDLLKCTEGFARPTPIQAQCWPVLMGGRDIIGIAETGSGKTLTFVLPGLERIRKAGAPDGGGVDILVATPGRLADLMEEGECDLSRVSYLVLDEADRMLDQGFEQAIRGIVSHCVPRGRRQTALFSATWPVAIQALAGEFLENPVKVTIGGEDLSSNKRVQQVVEVVGEFEREGRLRGLLTQYHGRRDNRVLVFALYKKEASRLELNLQRQGYKCLGIHGDKSQSDRIAAIEKFKTKEVPLLVATDVAARGLDIPDVEVVINYSFPLTIEDYVHR 424
MGKDELSMKEEEKEARERKLRKKAKKESKRAAELLKISEAETAETEVKEPADKLLNGTTNEKQDEQSSILRLSKEERKRAKKEKKKQEKIAAATSHATPLPSTPCTADAPHPLSKSEAQAWWEENEILVSGPGCDAFLPTLSFAGVGFPPDLLKCTEGFARPTPIQAQCWPVLMGGRDIIGIAETGSGKTLTFVLPGLERIRKAGAPDGGGVDILVATPGRLADLMEEGECDLSRVSYLVLDEADRMLDQGFEQAIRGIVSHCVPRGRRQTALFSATWPVAIQALAGEFLENPVKVTIGGEDLSSNKRVQQVVEVVGEFEREGRLRGLLTQYHGRRDNRVLVFALYKKEASRLELNLQRQGYKCLGIHGDKSQSDRIAAIEKFKTKEVPLLVATDVAARGLDIPDVEVVINYSFPLTIEDYVHR
Sbjct: 1 MGKDELSMKEEEKEARERKLRKKAKKESKRAAELLKISEAETAETEVKEPADKLLNGTTNEKQDEQSSILRLSKEERKRAKKEKKKQEKIAAATSHATPLPSTPCTADAPHPLSKSEAQAWWEENEILVSGPGCDAFLPTLSFAGVGFPPDLLKCTEGFARPTPIQAQCWPVLMGGRDIIGIAETGSGKTLTFVLPGLERIRKAGAPDGGGVDILVATPGRLADLMEEGECDLSRVSYLVLDEADRMLDQGFEQAIRGIVSHCVPRGRRQTALFSATWPVAIQALAGEFLENPVKVTIGGEDLSSNKRVQQVVEVVGEFEREGRLRGLLTQYHGRRDNRVLVFALYKKEASRLELNLQRQGYKCLGIHGDKSQSDRIAAIEKFKTKEVPLLVATDVAARGLDIPDVEVVINYSFPLTIEDYVHR 424
BLAST of EWM23379.1 vs. NCBI_GenBank
Match: gi|553180389|ref|XP_005853396.1| (dead box rna helicase [Nannochloropsis gaditana CCMP526] >gi|422295668|gb|EKU22967.1| dead box rna helicase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 660.603 bits (1703), Expect = 0.000e+0 Identity = 383/478 (80.13%), Postives = 389/478 (81.38%), Query Frame = 0
Query: 1 MGKDELSMKEEEKEARERKLRKKAKKESKRAAELLKISEAETAETEVKEPADKLLNGTTNEKQDEQSSILRLSKEERKRAKKEKKKQEKIAAATSHATPLPSTPCTADAPHPLSKSEAQAWWEENEILVSGPGCDAFLPTLSFAGVGFPPDLLKCTEGFARPTPIQAQCWPVLMGGRDIIGIAETGSGKTLTFVLPGLERIRKAGAPDGGGVD----ILVATP--------------------------------------------------GRLADLMEEGECDLSRVSYLVLDEADRMLDQGFEQAIRGIVSHCVPRGRRQTALFSATWPVAIQALAGEFLENPVKVTIGGEDLSSNKRVQQVVEVVGEFEREGRLRGLLTQYHGRRDNRVLVFALYKKEASRLELNLQRQGYKCLGIHGDKSQSDRIAAIEKFKTKEVPLLVATDVAARGLDIPDVEVVINYSFPLTIEDYVHR 424
MGKDELSMKEEEKEARERKLRKKAKKESKRAAELLKISEAETAETEVKEPADKLLNGTTNEKQDEQSSI RLSKEERKRAKKEKKKQEKIAAATSHATPLPSTPCTADAPHPLSKSEAQAWWEENEILVSGPGCDAFLPTLSFAGVGFPPDLLKCTEGFARPTPIQAQCWPVLMGGRDIIGIAETGSGKTLTF+LPGLERIRKAGAPDGG +LV P GRLADLMEEGECDLSRVSYLVLDEADRMLDQGFEQAIRGIVSHCVPRGRRQTALFSATWPVAIQALAGEFLENPVKVTIGGEDLSSNKRVQQVVEVVGEFEREGRLRGLLTQYHGRRDNRVLVFALYKK ++++ KFKTKEVPLLVATDVAARGLDIPDVEVVINYSFPLTIEDYVHR
Sbjct: 59 MGKDELSMKEEEKEARERKLRKKAKKESKRAAELLKISEAETAETEVKEPADKLLNGTTNEKQDEQSSISRLSKEERKRAKKEKKKQEKIAAATSHATPLPSTPCTADAPHPLSKSEAQAWWEENEILVSGPGCDAFLPTLSFAGVGFPPDLLKCTEGFARPTPIQAQCWPVLMGGRDIIGIAETGSGKTLTFILPGLERIRKAGAPDGGRAGHVPRMLVVAPTRELAMQSAEVIDGVVEGSGLRSICLFGGVPKQEQRQALRGGVDILVATPGRLADLMEEGECDLSRVSYLVLDEADRMLDQGFEQAIRGIVSHCVPRGRRQTALFSATWPVAIQALAGEFLENPVKVTIGGEDLSSNKRVQQVVEVVGEFEREGRLRGLLTQYHGRRDNRVLVFALYKK-----------------AFMETRARATASPPSTKFKTKEVPLLVATDVAARGLDIPDVEVVINYSFPLTIEDYVHR 519
BLAST of EWM23379.1 vs. NCBI_GenBank
Match: gi|673028036|ref|XP_008867979.1| (hypothetical protein H310_05119 [Aphanomyces invadans] >gi|574476752|gb|ETW03750.1| hypothetical protein H310_05119 [Aphanomyces invadans]) HSP 1 Score: 382.489 bits (981), Expect = 2.490e-125 Identity = 216/474 (45.57%), Postives = 285/474 (60.13%), Query Frame = 0
Query: 17 ERKLRKKAKKESKRAA-ELLKISEAETAETEVKEPADKLLNGTTNEKQDEQSSILRLSKEERKRAKKEKKKQEKIAAATS--HATPLPS-----------TPCTADAPHPLSKSEAQAWWEENEILVSGPGCDAFLPTLSFAGVGFPPDLLKCTEGFARPTPIQAQCWPVLMGGRDIIGIAETGSGKTLTFVLPGL----ERIRKAG----------APD--------------------------GG------------GVDILVATPGRLADLMEEGECDLSRVSYLVLDEADRMLDQGFEQAIRGIVSHCVPRGRRQTALFSATWPVAIQALAGEFLENPVKVTIGGEDLSSNKRVQQVVEVVGEFEREGRLRGLLTQYHGRRDNRVLVFALYKKEASRLELNLQRQGYKCLGIHGDKSQSDRIAAIEKFKTKEVPLLVATDVAARGLDIPDVEVVINYSFPLTIEDYVHR 424
++KL KK +KE KR E +S+ TA+ +V E + +++ ++ R E AK KK + ++ ++ + PLPS +P TA ++ ++ A+ ++N++ +SG C + P LSF + FP ++ T GFA+PTPIQ+QCWP+L GRDIIGIA+TGSGKTL F +PGL ++++K AP GG GV ++VATPGRL DLMEE C L V+Y VLDEADRMLD GFE+ IR I+ C P RQ A+FSATWP +IQ LA EFL +PVKVTIG EDLS++ V Q+VEVV EF R+ ++ GLL +YH R NRVLVF LYKKEA R+E LQR+G+ C IHGDK Q R+ A++ FK+ ++PLL+ATDVAARGLDIPDVE V+NYSFPLTIEDYVHR
Sbjct: 5 DKKLAKKLRKEKKRQEREAAAVSDDMTADDDVVE---------STKEKKQKKDKKRKKAEGDDDAKPSKKAKSTVSDFSNGPYQQPLPSDKSFVKSFYVESPVTA----AMTDADVDAFHQQNQMTMSGNHC-LYRPVLSFKEINFPKHMMTSTTGFAKPTPIQSQCWPILTSGRDIIGIAQTGSGKTLAFAIPGLVHISDQVKKNANLKGPIMLVVAPTRELAIQCADVISVAGTAASISSICIYGGVPKHEQKRQLKQGVHVVVATPGRLKDLMEEKACSLKHVTYCVLDEADRMLDDGFEKDIRLIIGGCHPE--RQIAMFSATWPQSIQKLAHEFLTDPVKVTIGSEDLSASANVTQIVEVVDEFGRDAKIDGLLRKYHSSRKNRVLVFVLYKKEAVRVEQMLQRKGWSCTAIHGDKGQQQRMEALDAFKSGQIPLLIATDVAARGLDIPDVEFVLNYSFPLTIEDYVHR 462
BLAST of EWM23379.1 vs. NCBI_GenBank
Match: gi|669152504|ref|XP_008611814.1| (hypothetical protein SDRG_07740 [Saprolegnia diclina VS20] >gi|530736700|gb|EQC34942.1| hypothetical protein SDRG_07740 [Saprolegnia diclina VS20]) HSP 1 Score: 382.104 bits (980), Expect = 3.685e-125 Identity = 197/364 (54.12%), Postives = 240/364 (65.93%), Query Frame = 0
Query: 113 LSKSEAQAWWEENEILVSGPGCDAFLPTLSFAGVGFPPDLLKCTEGFARPTPIQAQCWPVLMGGRDIIGIAETGSGKTLTFVLPGLERI--------RKAG------APD--------------------------GG------------GVDILVATPGRLADLMEEGECDLSRVSYLVLDEADRMLDQGFEQAIRGIVSHCVPRGRRQTALFSATWPVAIQALAGEFLENPVKVTIGGEDLSSNKRVQQVVEVVGEFEREGRLRGLLTQYHGRRDNRVLVFALYKKEASRLELNLQRQGYKCLGIHGDKSQSDRIAAIEKFKTKEVPLLVATDVAARGLDIPDVEVVINYSFPLTIEDYVHR 424
LS A+ +EN + +SG C + P LSFA FP +LK E FA+PTPIQ+QCWP+L GRDIIGIA+TGSGKTL F +PGL I +K G AP GG GV ++VATPGRL DL++E C L+ VSY+VLDEADRMLD GFE+ IR I++ C RQ A+FSATWP +IQ LA EFLE+PVKVTIG +DL++++ V Q+VEVV EF R+ +L GLL +YHG R NRVLVF LYKKEA R+E LQR+G+KC IHGDK Q+ R+ A+E FK+ +PLL+ATDVAARGLDIPDVE V+NYSFPLTIEDYVHR
Sbjct: 97 LSNEAVDAFHQENHMTMSGNHC-LYRPILSFADAPFPKAMLKSCENFAKPTPIQSQCWPILTSGRDIIGIAQTGSGKTLAFSVPGLVHITDQLKTNPKKKGPIMLVVAPTRELAVQCADVIAVAGKSVNINSLCLYGGVPKHEQKRALKAGVQVVVATPGRLKDLVQEKSCSLANVSYIVLDEADRMLDDGFEKDIRLIMAEC--HAERQIAMFSATWPQSIQKLAHEFLEDPVKVTIGSDDLAASENVTQIVEVVDEFGRDAKLDGLLKKYHGSRKNRVLVFVLYKKEAVRVETMLQRKGWKCTAIHGDKGQAQRMEALEAFKSGTIPLLIATDVAARGLDIPDVEFVLNYSFPLTIEDYVHR 457
BLAST of EWM23379.1 vs. NCBI_GenBank
Match: gi|1173933862|gb|OQR85422.1| (DEAD/DEAH box RNA helicase [Achlya hypogyna]) HSP 1 Score: 375.941 bits (964), Expect = 1.173e-122 Identity = 192/364 (52.75%), Postives = 238/364 (65.38%), Query Frame = 0
Query: 113 LSKSEAQAWWEENEILVSGPGCDAFLPTLSFAGVGFPPDLLKCTEGFARPTPIQAQCWPVLMGGRDIIGIAETGSGKTLTFVLPGL--------------------------------ERIRKAGAP--------DGG------------GVDILVATPGRLADLMEEGECDLSRVSYLVLDEADRMLDQGFEQAIRGIVSHCVPRGRRQTALFSATWPVAIQALAGEFLENPVKVTIGGEDLSSNKRVQQVVEVVGEFEREGRLRGLLTQYHGRRDNRVLVFALYKKEASRLELNLQRQGYKCLGIHGDKSQSDRIAAIEKFKTKEVPLLVATDVAARGLDIPDVEVVINYSFPLTIEDYVHR 424
L+ + A+ +E+ + +SG C + P LSFA FP +LK E FA+PTPIQ+QCWP+L GRDIIGIA+TGSGKTL F +PGL E I +AG GG GV ++VATPGRL DL++E C L+ V+Y+VLDEADRMLD GFE+ IR I+ C RQ A+FSATWP +IQ LA EFLE+PVKVTIG +DL++++ V Q+VEVV EF R+ +L GLL +YHG R NRVLVF LYKKEA R+E L R+G+KC IHGDK Q+ R+ A+E FK+ + PLL+ATDVAARGLDIPDVE V+NYSFPLTIEDYVHR
Sbjct: 103 LTNEQVDAFHQEHHMTMSGNKC-LYRPILSFADATFPKAMLKSCENFAKPTPIQSQCWPILTSGRDIIGIAQTGSGKTLAFSVPGLVHIADQLKANKSKKGPIMLVVAPTRELAVQCAEVISEAGKAINISSLCLYGGVPKHEQKRALKAGVQVVVATPGRLKDLVQEKSCSLANVTYVVLDEADRMLDDGFEKDIRLIMGEC--HSERQIAMFSATWPQSIQKLAHEFLEDPVKVTIGSDDLAASENVTQIVEVVDEFGRDAKLDGLLKKYHGSRKNRVLVFVLYKKEAVRVETMLMRKGWKCTAIHGDKGQAQRMEALEAFKSGKTPLLIATDVAARGLDIPDVEFVLNYSFPLTIEDYVHR 463
BLAST of EWM23379.1 vs. NCBI_GenBank
Match: gi|698809674|ref|XP_009837866.1| (hypothetical protein H257_12387 [Aphanomyces astaci] >gi|574107124|gb|ETV72638.1| hypothetical protein H257_12387 [Aphanomyces astaci]) HSP 1 Score: 374.015 bits (959), Expect = 8.590e-122 Identity = 186/364 (51.10%), Postives = 235/364 (64.56%), Query Frame = 0
Query: 113 LSKSEAQAWWEENEILVSGPGCDAFLPTLSFAGVGFPPDLLKCTEGFARPTPIQAQCWPVLMGGRDIIGIAETGSGKTLTFVLPGL----ERIRKAGAPDG------------------------------------------------GGVDILVATPGRLADLMEEGECDLSRVSYLVLDEADRMLDQGFEQAIRGIVSHCVPRGRRQTALFSATWPVAIQALAGEFLENPVKVTIGGEDLSSNKRVQQVVEVVGEFEREGRLRGLLTQYHGRRDNRVLVFALYKKEASRLELNLQRQGYKCLGIHGDKSQSDRIAAIEKFKTKEVPLLVATDVAARGLDIPDVEVVINYSFPLTIEDYVHR 424
++ ++ A+ + +++++SG C + P L+F V FP ++ T GFA PTPIQ+QCWP+L GRDIIGIA+TGSGKTL F +PGL ++++K + G GV ++VATPGRL DLMEE C L V+Y VLDEADRMLD GFE+ IR I+ C P RQ A+FSATWP +IQ LA EFL NPVKVTIG EDLS++ V Q+VEVV EF R+ ++ GLL +YH R NRVLVF LYKKEA R+E LQR+G+ C IHGDK Q R+ A++ FK+ ++PLL+ATDVAARGLDIPDVE V+NYSFPLTIEDYVHR
Sbjct: 116 MTDADVDAFHQRHQMIMSGNDC-LYRPLLTFKEVNFPKHMMTSTTGFATPTPIQSQCWPILTSGRDIIGIAQTGSGKTLAFAIPGLVHIADQVKKNASIKGPIMLVVAPTRELAIQCADVIAIAGNAASISSICIYGGVPKHEQKRQLKAGVHVVVATPGRLKDLMEERACSLKHVTYCVLDEADRMLDDGFEKDIRVIIGGCHPE--RQIAMFSATWPQSIQKLAHEFLTNPVKVTIGSEDLSASANVTQIVEVVDEFGRDAKIDGLLRKYHASRKNRVLVFVLYKKEAVRVEQMLQRKGWACTAIHGDKGQQQRMEALDAFKSGQIPLLIATDVAARGLDIPDVEFVLNYSFPLTIEDYVHR 476
BLAST of EWM23379.1 vs. NCBI_GenBank
Match: gi|1173938384|gb|OQR88668.1| (DEAD/DEAH box RNA helicase [Thraustotheca clavata]) HSP 1 Score: 370.933 bits (951), Expect = 7.851e-121 Identity = 193/370 (52.16%), Postives = 237/370 (64.05%), Query Frame = 0
Query: 107 ADAPHPLSKSEAQAWWEENEILVSGPGCDAFLPTLSFAGVGFPPDLLKCTEGFARPTPIQAQCWPVLMGGRDIIGIAETGSGKTLTFVLPGLERI--------RKAG------APD--------------------------GG------------GVDILVATPGRLADLMEEGECDLSRVSYLVLDEADRMLDQGFEQAIRGIVSHCVPRGRRQTALFSATWPVAIQALAGEFLENPVKVTIGGEDLSSNKRVQQVVEVVGEFEREGRLRGLLTQYHGRRDNRVLVFALYKKEASRLELNLQRQGYKCLGIHGDKSQSDRIAAIEKFKTKEVPLLVATDVAARGLDIPDVEVVINYSFPLTIEDYVHR 424
+D LS + A+ +E+ + +SG C + P L FA V FP +LK E F +PTPIQ+QCWP+L GRDIIGIA+TGSGKTL F +PGL I +K G AP GG GV ++VATPGRL DL++E C L+ V+Y VLDEADRMLD GFE+ IR I+S C RQ A+FSATWP +IQ LA EFL +PVKVTIG +DL++++ V Q+VEVV E+ R+ +L LL +YH R NRVLVF LYKKEA R+E L R+G+KC IHGDK Q R+ A+E FKT +VPLL+ATDVAARGLDIPDVE V+NYSFPLTIEDYVHR
Sbjct: 86 SDKTASLSNQDVDAFHQEHHMTISGNNC-LYRPILKFADVNFPKAMLKSCENFTKPTPIQSQCWPILTSGRDIIGIAQTGSGKTLAFSVPGLVHITDQLKNNPKKKGPIMLVVAPTRELAVQCAEVISEAGKSVNITSLCLYGGVPKHEQKRALKAGVQVVVATPGRLKDLVQEKCCSLANVTYTVLDEADRMLDDGFEKDIRLIMSEC--HVERQIAMFSATWPQSIQKLAHEFLVDPVKVTIGSDDLAASENVTQIVEVVDEYGRDSKLDSLLKKYHSSRKNRVLVFVLYKKEAVRVETMLNRKGWKCTAIHGDKGQQQRMEALEAFKTGKVPLLIATDVAARGLDIPDVEFVLNYSFPLTIEDYVHR 452
BLAST of EWM23379.1 vs. NCBI_GenBank
Match: gi|953494248|emb|CEG43842.1| (dead box rna helicase [Plasmopara halstedii]) HSP 1 Score: 361.303 bits (926), Expect = 8.270e-117 Identity = 181/366 (49.45%), Postives = 234/366 (63.93%), Query Frame = 0
Query: 113 LSKSEAQAWWEENEILVSGPGCDAFLPTLSFAGVGFPPDLLKCTEGFARPTPIQAQCWPVLMGGRDIIGIAETGSGKTLTFVLPGLERIRKAGAPD------------------------------------------GG------------GVDILVATPGRLADLMEEGECDLSRVSYLVLDEADRMLDQGFEQAIRGIVSHCVPRGRRQTALFSATWPVAIQALAGEFLENPVKVTIGGEDLSSNKRVQQVVEVVGEFEREGRLRGLLTQYHGRRDNRVLVFALYKKEASRLELNLQRQGYKCLGIHGDKSQSDRIAAIEKFKTKEVPLLVATDVAARGLDIPDVEVVINYSFPLTIEDYVHR 424
++ +E A+ E N++++SG C + P LSF V F +K T+ F +PTPIQ+QCWP+L GRDIIGIAETGSGKTL F +PGL I A P+ GG G+ ++VATPGRL DL+EE C+LS+V+Y+VLDEADRMLD+GFE+ IR I+ P RQ A+FSATWP +IQ LA EFL +PVKVTIG ++L+++ V Q+VEV+ + R+ R LL +YH R NR+L+F LYKKEA R+E L ++G+ C+ IHGD++Q R A+E+FK+ EVPLL+ATDVAARGLDIP VE VINYSFPLTIEDYVHR
Sbjct: 121 MTDNEVSAFHEANQMILSGNNC-LYRPVLSFDDVTFESKFMKTTKDFDKPTPIQSQCWPILASGRDIIGIAETGSGKTLAFAIPGL--IHIAAQPEVSHKHPGPRMLVVAPTRELAMQSSAVISEAGKNCGLKSICIYGGVPKQAQKKALRDGIHVVVATPGRLRDLLEERSCNLSKVTYVVLDEADRMLDEGFEKDIRAIIGSTHPE--RQIAMFSATWPQSIQKLAHEFLNDPVKVTIGSDELAASHNVTQIVEVIDDRARDARAHALLQKYHSSRKNRILLFVLYKKEADRVERMLHQRGWHCVAIHGDRTQQQRSEAVEQFKSGEVPLLIATDVAARGLDIPGVEYVINYSFPLTIEDYVHR 481
BLAST of EWM23379.1 vs. NCBI_GenBank
Match: gi|970655770|gb|KUF93881.1| (Gag-Pol polyprotein [Phytophthora nicotianae]) HSP 1 Score: 358.221 bits (918), Expect = 8.291e-116 Identity = 182/364 (50.00%), Postives = 234/364 (64.29%), Query Frame = 0
Query: 113 LSKSEAQAWWEENEILVSGPGCDAFLPTLSFAGVGFPPDLLKCTEGFARPTPIQAQCWPVLMGGRDIIGIAETGSGKTLTFVLPGLERI------------------------------------RKAGAPD----GG------------GVDILVATPGRLADLMEEGECDLSRVSYLVLDEADRMLDQGFEQAIRGIVSHCVPRGRRQTALFSATWPVAIQALAGEFLENPVKVTIGGEDLSSNKRVQQVVEVVGEFEREGRLRGLLTQYHGRRDNRVLVFALYKKEASRLELNLQRQGYKCLGIHGDKSQSDRIAAIEKFKTKEVPLLVATDVAARGLDIPDVEVVINYSFPLTIEDYVHR 424
++ E A+ E N++++SG C + P LSF V F +K T+GF +PTPIQ+QCWP+L GRDIIGIAETGSGKTL F +PGL I +K G GG GV ++VATPGRL DL+EE C+LS+V+++VLDEADRMLD+GFE+ IR I+ P RQ A+FSATWP +IQ LA EFL +PVKVTIG ++L+++ V Q+VEV+ + R+ R LL +YH R NR+L+F LYKKEA R+E L ++G+ C+ IHGD+SQ R A+E+FK+ EVPLL+ATDVAARGLDIP VE V+NYSFPLTIEDYVHR
Sbjct: 105 MTNEEVAAFHEANQMILSGNNC-LYRPVLSFDDVTFESKFMKTTKGFDKPTPIQSQCWPILASGRDIIGIAETGSGKTLAFSIPGLIHIAAQPEVSPKYPGPRMLVVAPTRELAMQSSAVISEAGKKCGLKSICIYGGVPKHTQKKALRDGVHVVVATPGRLKDLVEERSCNLSKVTFVVLDEADRMLDEGFEKDIRAIIGSTHPE--RQIAMFSATWPQSIQKLAHEFLNDPVKVTIGSDELAASHNVTQIVEVIEDRARDARAHALLQKYHSSRKNRILLFVLYKKEADRVERMLHQRGWNCIAIHGDRSQQQRSEAVEQFKSGEVPLLIATDVAARGLDIPGVEYVLNYSFPLTIEDYVHR 465
BLAST of EWM23379.1 vs. NCBI_GenBank
Match: gi|675195217|ref|XP_008906493.1| (hypothetical protein PPTG_12047 [Phytophthora parasitica INRA-310] >gi|566023081|gb|ETI45992.1| hypothetical protein F443_09581 [Phytophthora parasitica P1569] >gi|567960376|gb|ETK85937.1| hypothetical protein L915_09376 [Phytophthora parasitica] >gi|567989113|gb|ETL39381.1| hypothetical protein L916_09280 [Phytophthora parasitica] >gi|568018321|gb|ETL92496.1| hypothetical protein L917_09213 [Phytophthora parasitica] >gi|568048769|gb|ETM45799.1| hypothetical protein L914_09237 [Phytophthora parasitica] >gi|568093409|gb|ETN08205.1| hypothetical protein PPTG_12047 [Phytophthora parasitica INRA-310] >gi|570326737|gb|ETO74685.1| hypothetical protein F444_09643 [Phytophthora parasitica P1976] >gi|570950509|gb|ETP15766.1| hypothetical protein F441_09513 [Phytophthora parasitica CJ01A1] >gi|570984190|gb|ETP43853.1| hypothetical protein F442_09486 [Phytophthora parasitica P10297] >gi|970637485|gb|KUF81492.1| DEAD-box ATP-dependent RNA helicase 5 [Phytophthora nicotianae]) HSP 1 Score: 358.607 bits (919), Expect = 8.842e-116 Identity = 182/364 (50.00%), Postives = 234/364 (64.29%), Query Frame = 0
Query: 113 LSKSEAQAWWEENEILVSGPGCDAFLPTLSFAGVGFPPDLLKCTEGFARPTPIQAQCWPVLMGGRDIIGIAETGSGKTLTFVLPGLERI------------------------------------RKAGAPD----GG------------GVDILVATPGRLADLMEEGECDLSRVSYLVLDEADRMLDQGFEQAIRGIVSHCVPRGRRQTALFSATWPVAIQALAGEFLENPVKVTIGGEDLSSNKRVQQVVEVVGEFEREGRLRGLLTQYHGRRDNRVLVFALYKKEASRLELNLQRQGYKCLGIHGDKSQSDRIAAIEKFKTKEVPLLVATDVAARGLDIPDVEVVINYSFPLTIEDYVHR 424
++ E A+ E N++++SG C + P LSF V F +K T+GF +PTPIQ+QCWP+L GRDIIGIAETGSGKTL F +PGL I +K G GG GV ++VATPGRL DL+EE C+LS+V+++VLDEADRMLD+GFE+ IR I+ P RQ A+FSATWP +IQ LA EFL +PVKVTIG ++L+++ V Q+VEV+ + R+ R LL +YH R NR+L+F LYKKEA R+E L ++G+ C+ IHGD+SQ R A+E+FK+ EVPLL+ATDVAARGLDIP VE V+NYSFPLTIEDYVHR
Sbjct: 120 MTNEEVAAFHEANQMILSGNNC-LYRPVLSFDDVTFESKFMKTTKGFDKPTPIQSQCWPILASGRDIIGIAETGSGKTLAFSIPGLIHIAAQPEVSPKYPGPRMLVVAPTRELAMQSSAVISEAGKKCGLKSICIYGGVPKHTQKKALRDGVHVVVATPGRLKDLVEERSCNLSKVTFVVLDEADRMLDEGFEKDIRAIIGSTHPE--RQIAMFSATWPQSIQKLAHEFLNDPVKVTIGSDELAASHNVTQIVEVIEDRARDARAHALLQKYHSSRKNRILLFVLYKKEADRVERMLHQRGWNCIAIHGDRSQQQRSEAVEQFKSGEVPLLIATDVAARGLDIPGVEYVLNYSFPLTIEDYVHR 480 The following BLAST results are available for this feature:
BLAST of EWM23379.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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