EWM23416.1, cds7264 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM23416.1 vs. NCBI_GenBank
Match: gi|585104432|gb|EWM23416.1| (hypothetical protein Naga_100077g10 [Nannochloropsis gaditana]) HSP 1 Score: 433.335 bits (1113), Expect = 9.259e-154 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0 Query: 1 MSGSMKPYKWFSGTSGWIHELLAKLPKDMQTKIRSWALFRPDDINDLYPFPRNRISYPGVERIKGYRYPAPGSRPKVNVPQSESDDKLYDIKYFDHDTRRRPAEVFSWSPDFKRVALPDSPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGEEEQIVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210 MSGSMKPYKWFSGTSGWIHELLAKLPKDMQTKIRSWALFRPDDINDLYPFPRNRISYPGVERIKGYRYPAPGSRPKVNVPQSESDDKLYDIKYFDHDTRRRPAEVFSWSPDFKRVALPDSPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGEEEQIVKDCEAKGLPVPPGKRAKFAVPAMATQRRW Sbjct: 1 MSGSMKPYKWFSGTSGWIHELLAKLPKDMQTKIRSWALFRPDDINDLYPFPRNRISYPGVERIKGYRYPAPGSRPKVNVPQSESDDKLYDIKYFDHDTRRRPAEVFSWSPDFKRVALPDSPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGEEEQIVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210
BLAST of EWM23416.1 vs. NCBI_GenBank
Match: gi|298714812|emb|CBJ25711.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 138.658 bits (348), Expect = 1.744e-37 Identity = 81/201 (40.30%), Postives = 113/201 (56.22%), Query Frame = 0 Query: 25 LPKDMQTKIRSWALFRPDDINDLYPFPRNRISYPGVERIKGYRYPAPGSRPKVNVPQSESDDKLYDIKYFDHDTRRRPAEVFSW-SPDFKRVA--------------LPDSPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGEEEQIVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210 +PKD+ KIR+ F+P D N + P + + PG++ YR PAP S+P+ NVP S++ D YDI YF DTRR P ++ S+ +P + +A P+ P P++ GNKNPAVL YDPTGLRS MSATN+ ++L MP HNV+ W + V + +AKGLP PPG+R + P + W Sbjct: 13 IPKDIHEKIRNVLEFKPKDPNRGWQVPPAKAATPGLKAKNEYRTPAPNSQPQANVPVSDNPDLQYDIGYFKRDTRRAPRQIHSYVAPSLRMLADERVKALELISNELGPEDPAPSQ-----GNKNPAVLKYDPTGLRSTMSATNEAWTESLKEYMPTHNVKPWWWHSDVDHVAEAQAKGLPPPPGRRMDWEAPKSSKVASW 208
BLAST of EWM23416.1 vs. NCBI_GenBank
Match: gi|953497315|emb|CEG41624.1| (hypothetical protein PHALS_11957 [Plasmopara halstedii]) HSP 1 Score: 117.857 bits (294), Expect = 1.606e-29 Identity = 66/153 (43.14%), Postives = 95/153 (62.09%), Query Frame = 0 Query: 64 KGYRYPAPGSRPK-VNVPQSESDDKLYDIKYFDHDTRRRPAEV-FSWSPDF---KRVALPDSPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGE-EEQIVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210 +GYRYP+P + + V VP S+S D +Y+I Y+ D RR P + P KRV +P + GSPGNKNPAVL+YDPTG RSAMS T++ +K + + + HNVR+ W+G+ E++I++DC AK LP PG+ + P+ + RW Sbjct: 50 QGYRYPSPDKQAEGVFVPSSDSKDSIYNINYYTRDIRRFPFPIEVGMHPSLPIEKRVEIPADAK----RGSPGNKNPAVLSYDPTGTRSAMSTTHEARDKLIQQHVSTHNVRFEWEGDAEDEILEDCIAKNLPPAPGRPFVWNFPSQSRVMRW 198
BLAST of EWM23416.1 vs. NCBI_GenBank
Match: gi|1214713189|gb|OWZ24093.1| (hypothetical protein PHMEG_000944 [Phytophthora megakarya]) HSP 1 Score: 114.775 bits (286), Expect = 2.182e-28 Identity = 81/208 (38.94%), Postives = 110/208 (52.88%), Query Frame = 0 Query: 11 FSGTSGWI----HELLAKLPKDMQTKIRSWALFRPDDINDLYPFPRNRISYPGVERIKGYRYPAPGSRPK-VNVPQSESDDKLYDIKYFDHDTRRRP--AEVFSWSPDFKRVALPDSPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGE-EEQIVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210 SG W E LP D++ K+R +F + P V +GYRYP+P + + V VP +ES D +Y+I+Y+ D RR P EV P + P AK GSPGNKNPAVL YDPTG RSAMS T++ +K + + HNVR+ W+GE E++I++D EAK LP PG+ + PA + RW Sbjct: 1 MSGKEAWKPFVKFEYQKLLPADLRDKLRKMLVFTEATGT------KQVNQSPAVS--QGYRYPSPDKQAEGVFVPSNESKDSVYNIQYYTRDIRRFPFPTEV-GMHPSIPVETPAEIPADAK-RGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLIMQHASTHNVRFEWEGEAEKEILEDLEAKSLPPTPGRPFVWDFPAQSRVMRW 198
BLAST of EWM23416.1 vs. NCBI_GenBank
Match: gi|635372610|emb|CCI39414.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 114.775 bits (286), Expect = 2.182e-28 Identity = 81/218 (37.16%), Postives = 115/218 (52.75%), Query Frame = 0 Query: 1 MSGSMKPYKWFSGTSGWIHELLAKLPKDMQTKIRSWALFRPDDINDLYPFPRNRISYPGVERIKGYRYPAPGSRPK-VNVPQSESDDKLYDIKYFDHDTRRRPAEVFSWS-----PDFKRVALPDSPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPN--HNVRYAWQGEEEQIVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210 MS +P+K F +S LP ++ ++R LF+ D S P E + YR P+P S+PK V+VP + + +Y+I+Y+ DTRR A+ F+ P K V LP+ GSPGNKNPAVL YDPTG RSAMS T+ + + L R + HNV Y W+ +E+I++D E K LP PG+ ++ VP + Q W Sbjct: 1 MSSKWEPFKPFRWSS--------LLPDTVRQRLREVLLFKVASGCD------QPQSNPSAE--QKYREPSPSSQPKDVHVPSYPNKESVYNIQYYTRDTRRNLAKEFAVEMHPSIPIKKIVELPE----GAPKGSPGNKNPAVLGYDPTGTRSAMSTTHAAMNQLLQRQVETNPHNVHYEWEPFQEEIIRDFEEKNLPPIPGRPCQWHVPTSSRQEDW 198
BLAST of EWM23416.1 vs. NCBI_GenBank
Match: gi|301097242|ref|XP_002897716.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262106737|gb|EEY64789.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 114.39 bits (285), Expect = 3.574e-28 Identity = 68/151 (45.03%), Postives = 94/151 (62.25%), Query Frame = 0 Query: 64 KGYRYPAPGSRPK-VNVPQSESDDKLYDIKYFDHDTRRRP--AEVFSWSPDFKRVALPDSPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGE-EEQIVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210 +GYRYP+P + + V+VP S+S D +Y+I+Y+ D RR P EV P + P AK GSPGNKNPAVL YDPTG RSAMS T++ +K + + HNVR+ W+G+ E++I++D EAK LP PG+ + PA + RW Sbjct: 50 QGYRYPSPDKQAEGVSVPSSDSKDSIYNIQYYTRDIRRFPFPTEV-GMHPSIPMEKRAEIPADAK-RGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFEWEGDAEKEILEDLEAKNLPPTPGRPFVWDFPAQSRVMRW 198
BLAST of EWM23416.1 vs. NCBI_GenBank
Match: gi|695417394|ref|XP_009527095.1| (hypothetical protein PHYSODRAFT_560449 [Phytophthora sojae] >gi|348678220|gb|EGZ18037.1| hypothetical protein PHYSODRAFT_560449 [Phytophthora sojae]) HSP 1 Score: 111.694 bits (278), Expect = 3.544e-27 Identity = 67/151 (44.37%), Postives = 93/151 (61.59%), Query Frame = 0 Query: 64 KGYRYPAPGSRPK-VNVPQSESDDKLYDIKYFDHDTRR--RPAEVFSWSPDFKRVALPDSPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGE-EEQIVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210 +GYRYP+P + + V+VP S+S D +Y+I+Y+ D RR P EV P + P AK GSPGNKNPAVL YDPTG RSAMS T++ +K + + HNVR+ W+G+ E+ I++D +AK LP PG+ + PA + RW Sbjct: 50 QGYRYPSPDKQAEGVHVPSSDSKDSIYNIQYYTRDIRRFPYPTEV-GMHPSIPVQKRAEIPADAK-RGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFEWEGDAEKDILEDADAKNLPPVPGRPFVWDFPAQSRVMRW 198
BLAST of EWM23416.1 vs. NCBI_GenBank
Match: gi|570336237|gb|ETO84185.1| (hypothetical protein F444_01887 [Phytophthora parasitica P1976]) HSP 1 Score: 110.538 bits (275), Expect = 2.665e-26 Identity = 66/151 (43.71%), Postives = 93/151 (61.59%), Query Frame = 0 Query: 64 KGYRYPAPGSRPK-VNVPQSESDDKLYDIKYFDHDTRRRP--AEVFSWSPDFKRVALPDSPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGEEEQ-IVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210 +GYRYP+P + + V+VP S+S + +Y+I+Y+ D RR P EV P + P AK GSPGNKNPAVL YDPTG RSAMS T++ +K + + HNVR+ W+G+ E+ I++D EAK LP PG+ + P+ + RW Sbjct: 95 QGYRYPSPDKQAEGVSVPSSDSKESIYNIQYYTRDIRRFPFPTEV-GMHPSIPVEKRAEIPADAK-RGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFEWEGDAEKDILEDLEAKNLPPTPGRPFVWDFPSQSRVMRW 243
BLAST of EWM23416.1 vs. NCBI_GenBank
Match: gi|566032547|gb|ETI55458.1| (hypothetical protein F443_01883 [Phytophthora parasitica P1569] >gi|568027759|gb|ETM01705.1| hypothetical protein L917_01734 [Phytophthora parasitica] >gi|568058302|gb|ETM54936.1| hypothetical protein L914_01784 [Phytophthora parasitica]) HSP 1 Score: 110.538 bits (275), Expect = 3.800e-26 Identity = 66/151 (43.71%), Postives = 93/151 (61.59%), Query Frame = 0 Query: 64 KGYRYPAPGSRPK-VNVPQSESDDKLYDIKYFDHDTRRRP--AEVFSWSPDFKRVALPDSPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGEEEQ-IVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210 +GYRYP+P + + V+VP S+S + +Y+I+Y+ D RR P EV P + P AK GSPGNKNPAVL YDPTG RSAMS T++ +K + + HNVR+ W+G+ E+ I++D EAK LP PG+ + P+ + RW Sbjct: 112 QGYRYPSPDKQAEGVSVPSSDSKESIYNIQYYTRDIRRFPFPTEV-GMHPSIPVEKRAEIPADAK-RGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFEWEGDAEKDILEDLEAKNLPPTPGRPFVWDFPSQSRVMRW 260
BLAST of EWM23416.1 vs. NCBI_GenBank
Match: gi|567970197|gb|ETK95244.1| (hypothetical protein L915_01807 [Phytophthora parasitica] >gi|570960284|gb|ETP25263.1| hypothetical protein F441_01844 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 110.538 bits (275), Expect = 3.923e-26 Identity = 66/151 (43.71%), Postives = 93/151 (61.59%), Query Frame = 0 Query: 64 KGYRYPAPGSRPK-VNVPQSESDDKLYDIKYFDHDTRRRP--AEVFSWSPDFKRVALPDSPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGEEEQ-IVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210 +GYRYP+P + + V+VP S+S + +Y+I+Y+ D RR P EV P + P AK GSPGNKNPAVL YDPTG RSAMS T++ +K + + HNVR+ W+G+ E+ I++D EAK LP PG+ + P+ + RW Sbjct: 112 QGYRYPSPDKQAEGVSVPSSDSKESIYNIQYYTRDIRRFPFPTEV-GMHPSIPVEKRAEIPADAK-RGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFEWEGDAEKDILEDLEAKNLPPTPGRPFVWDFPSQSRVMRW 260 The following BLAST results are available for this feature:
BLAST of EWM23416.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|