EWM23416.1, cds7264 (CDS) Nannochloropsis gaditana

Overview
NameEWM23416.1
Unique Namecds7264
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:223614..223709 +
Alignment locationCM002471.1:223851..224014 +
Alignment locationCM002471.1:224211..224336 +
Alignment locationCM002471.1:224690..224936 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23416.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100077g10.5206.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:223614..223709 +
CM002471.1supercontigCM002471.1:223851..224014 +
CM002471.1supercontigCM002471.1:224211..224336 +
CM002471.1supercontigCM002471.1:224690..224936 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM23416.1 vs. NCBI_GenBank
Match: gi|585104432|gb|EWM23416.1| (hypothetical protein Naga_100077g10 [Nannochloropsis gaditana])

HSP 1 Score: 433.335 bits (1113), Expect = 9.259e-154
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0
Query:    1 MSGSMKPYKWFSGTSGWIHELLAKLPKDMQTKIRSWALFRPDDINDLYPFPRNRISYPGVERIKGYRYPAPGSRPKVNVPQSESDDKLYDIKYFDHDTRRRPAEVFSWSPDFKRVALPDSPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGEEEQIVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210
            MSGSMKPYKWFSGTSGWIHELLAKLPKDMQTKIRSWALFRPDDINDLYPFPRNRISYPGVERIKGYRYPAPGSRPKVNVPQSESDDKLYDIKYFDHDTRRRPAEVFSWSPDFKRVALPDSPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGEEEQIVKDCEAKGLPVPPGKRAKFAVPAMATQRRW
Sbjct:    1 MSGSMKPYKWFSGTSGWIHELLAKLPKDMQTKIRSWALFRPDDINDLYPFPRNRISYPGVERIKGYRYPAPGSRPKVNVPQSESDDKLYDIKYFDHDTRRRPAEVFSWSPDFKRVALPDSPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGEEEQIVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210          
BLAST of EWM23416.1 vs. NCBI_GenBank
Match: gi|298714812|emb|CBJ25711.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 138.658 bits (348), Expect = 1.744e-37
Identity = 81/201 (40.30%), Postives = 113/201 (56.22%), Query Frame = 0
Query:   25 LPKDMQTKIRSWALFRPDDINDLYPFPRNRISYPGVERIKGYRYPAPGSRPKVNVPQSESDDKLYDIKYFDHDTRRRPAEVFSW-SPDFKRVA--------------LPDSPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGEEEQIVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210
            +PKD+  KIR+   F+P D N  +  P  + + PG++    YR PAP S+P+ NVP S++ D  YDI YF  DTRR P ++ S+ +P  + +A               P+ P P++     GNKNPAVL YDPTGLRS MSATN+   ++L   MP HNV+  W   +   V + +AKGLP PPG+R  +  P  +    W
Sbjct:   13 IPKDIHEKIRNVLEFKPKDPNRGWQVPPAKAATPGLKAKNEYRTPAPNSQPQANVPVSDNPDLQYDIGYFKRDTRRAPRQIHSYVAPSLRMLADERVKALELISNELGPEDPAPSQ-----GNKNPAVLKYDPTGLRSTMSATNEAWTESLKEYMPTHNVKPWWWHSDVDHVAEAQAKGLPPPPGRRMDWEAPKSSKVASW 208          
BLAST of EWM23416.1 vs. NCBI_GenBank
Match: gi|953497315|emb|CEG41624.1| (hypothetical protein PHALS_11957 [Plasmopara halstedii])

HSP 1 Score: 117.857 bits (294), Expect = 1.606e-29
Identity = 66/153 (43.14%), Postives = 95/153 (62.09%), Query Frame = 0
Query:   64 KGYRYPAPGSRPK-VNVPQSESDDKLYDIKYFDHDTRRRPAEV-FSWSPDF---KRVALPDSPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGE-EEQIVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210
            +GYRYP+P  + + V VP S+S D +Y+I Y+  D RR P  +     P     KRV +P   +     GSPGNKNPAVL+YDPTG RSAMS T++  +K + + +  HNVR+ W+G+ E++I++DC AK LP  PG+   +  P+ +   RW
Sbjct:   50 QGYRYPSPDKQAEGVFVPSSDSKDSIYNINYYTRDIRRFPFPIEVGMHPSLPIEKRVEIPADAK----RGSPGNKNPAVLSYDPTGTRSAMSTTHEARDKLIQQHVSTHNVRFEWEGDAEDEILEDCIAKNLPPAPGRPFVWNFPSQSRVMRW 198          
BLAST of EWM23416.1 vs. NCBI_GenBank
Match: gi|1214713189|gb|OWZ24093.1| (hypothetical protein PHMEG_000944 [Phytophthora megakarya])

HSP 1 Score: 114.775 bits (286), Expect = 2.182e-28
Identity = 81/208 (38.94%), Postives = 110/208 (52.88%), Query Frame = 0
Query:   11 FSGTSGWI----HELLAKLPKDMQTKIRSWALFRPDDINDLYPFPRNRISYPGVERIKGYRYPAPGSRPK-VNVPQSESDDKLYDIKYFDHDTRRRP--AEVFSWSPDFKRVALPDSPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGE-EEQIVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210
             SG   W      E    LP D++ K+R   +F            +     P V   +GYRYP+P  + + V VP +ES D +Y+I+Y+  D RR P   EV    P        + P  AK  GSPGNKNPAVL YDPTG RSAMS T++  +K + +    HNVR+ W+GE E++I++D EAK LP  PG+   +  PA +   RW
Sbjct:    1 MSGKEAWKPFVKFEYQKLLPADLRDKLRKMLVFTEATGT------KQVNQSPAVS--QGYRYPSPDKQAEGVFVPSNESKDSVYNIQYYTRDIRRFPFPTEV-GMHPSIPVETPAEIPADAK-RGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLIMQHASTHNVRFEWEGEAEKEILEDLEAKSLPPTPGRPFVWDFPAQSRVMRW 198          
BLAST of EWM23416.1 vs. NCBI_GenBank
Match: gi|635372610|emb|CCI39414.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 114.775 bits (286), Expect = 2.182e-28
Identity = 81/218 (37.16%), Postives = 115/218 (52.75%), Query Frame = 0
Query:    1 MSGSMKPYKWFSGTSGWIHELLAKLPKDMQTKIRSWALFRPDDINDLYPFPRNRISYPGVERIKGYRYPAPGSRPK-VNVPQSESDDKLYDIKYFDHDTRRRPAEVFSWS-----PDFKRVALPDSPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPN--HNVRYAWQGEEEQIVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210
            MS   +P+K F  +S         LP  ++ ++R   LF+     D         S P  E  + YR P+P S+PK V+VP   + + +Y+I+Y+  DTRR  A+ F+       P  K V LP+        GSPGNKNPAVL YDPTG RSAMS T+  + + L R +    HNV Y W+  +E+I++D E K LP  PG+  ++ VP  + Q  W
Sbjct:    1 MSSKWEPFKPFRWSS--------LLPDTVRQRLREVLLFKVASGCD------QPQSNPSAE--QKYREPSPSSQPKDVHVPSYPNKESVYNIQYYTRDTRRNLAKEFAVEMHPSIPIKKIVELPE----GAPKGSPGNKNPAVLGYDPTGTRSAMSTTHAAMNQLLQRQVETNPHNVHYEWEPFQEEIIRDFEEKNLPPIPGRPCQWHVPTSSRQEDW 198          
BLAST of EWM23416.1 vs. NCBI_GenBank
Match: gi|301097242|ref|XP_002897716.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262106737|gb|EEY64789.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 114.39 bits (285), Expect = 3.574e-28
Identity = 68/151 (45.03%), Postives = 94/151 (62.25%), Query Frame = 0
Query:   64 KGYRYPAPGSRPK-VNVPQSESDDKLYDIKYFDHDTRRRP--AEVFSWSPDFKRVALPDSPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGE-EEQIVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210
            +GYRYP+P  + + V+VP S+S D +Y+I+Y+  D RR P   EV    P        + P  AK  GSPGNKNPAVL YDPTG RSAMS T++  +K + +    HNVR+ W+G+ E++I++D EAK LP  PG+   +  PA +   RW
Sbjct:   50 QGYRYPSPDKQAEGVSVPSSDSKDSIYNIQYYTRDIRRFPFPTEV-GMHPSIPMEKRAEIPADAK-RGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFEWEGDAEKEILEDLEAKNLPPTPGRPFVWDFPAQSRVMRW 198          
BLAST of EWM23416.1 vs. NCBI_GenBank
Match: gi|695417394|ref|XP_009527095.1| (hypothetical protein PHYSODRAFT_560449 [Phytophthora sojae] >gi|348678220|gb|EGZ18037.1| hypothetical protein PHYSODRAFT_560449 [Phytophthora sojae])

HSP 1 Score: 111.694 bits (278), Expect = 3.544e-27
Identity = 67/151 (44.37%), Postives = 93/151 (61.59%), Query Frame = 0
Query:   64 KGYRYPAPGSRPK-VNVPQSESDDKLYDIKYFDHDTRR--RPAEVFSWSPDFKRVALPDSPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGE-EEQIVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210
            +GYRYP+P  + + V+VP S+S D +Y+I+Y+  D RR   P EV    P        + P  AK  GSPGNKNPAVL YDPTG RSAMS T++  +K + +    HNVR+ W+G+ E+ I++D +AK LP  PG+   +  PA +   RW
Sbjct:   50 QGYRYPSPDKQAEGVHVPSSDSKDSIYNIQYYTRDIRRFPYPTEV-GMHPSIPVQKRAEIPADAK-RGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFEWEGDAEKDILEDADAKNLPPVPGRPFVWDFPAQSRVMRW 198          
BLAST of EWM23416.1 vs. NCBI_GenBank
Match: gi|570336237|gb|ETO84185.1| (hypothetical protein F444_01887 [Phytophthora parasitica P1976])

HSP 1 Score: 110.538 bits (275), Expect = 2.665e-26
Identity = 66/151 (43.71%), Postives = 93/151 (61.59%), Query Frame = 0
Query:   64 KGYRYPAPGSRPK-VNVPQSESDDKLYDIKYFDHDTRRRP--AEVFSWSPDFKRVALPDSPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGEEEQ-IVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210
            +GYRYP+P  + + V+VP S+S + +Y+I+Y+  D RR P   EV    P        + P  AK  GSPGNKNPAVL YDPTG RSAMS T++  +K + +    HNVR+ W+G+ E+ I++D EAK LP  PG+   +  P+ +   RW
Sbjct:   95 QGYRYPSPDKQAEGVSVPSSDSKESIYNIQYYTRDIRRFPFPTEV-GMHPSIPVEKRAEIPADAK-RGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFEWEGDAEKDILEDLEAKNLPPTPGRPFVWDFPSQSRVMRW 243          
BLAST of EWM23416.1 vs. NCBI_GenBank
Match: gi|566032547|gb|ETI55458.1| (hypothetical protein F443_01883 [Phytophthora parasitica P1569] >gi|568027759|gb|ETM01705.1| hypothetical protein L917_01734 [Phytophthora parasitica] >gi|568058302|gb|ETM54936.1| hypothetical protein L914_01784 [Phytophthora parasitica])

HSP 1 Score: 110.538 bits (275), Expect = 3.800e-26
Identity = 66/151 (43.71%), Postives = 93/151 (61.59%), Query Frame = 0
Query:   64 KGYRYPAPGSRPK-VNVPQSESDDKLYDIKYFDHDTRRRP--AEVFSWSPDFKRVALPDSPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGEEEQ-IVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210
            +GYRYP+P  + + V+VP S+S + +Y+I+Y+  D RR P   EV    P        + P  AK  GSPGNKNPAVL YDPTG RSAMS T++  +K + +    HNVR+ W+G+ E+ I++D EAK LP  PG+   +  P+ +   RW
Sbjct:  112 QGYRYPSPDKQAEGVSVPSSDSKESIYNIQYYTRDIRRFPFPTEV-GMHPSIPVEKRAEIPADAK-RGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFEWEGDAEKDILEDLEAKNLPPTPGRPFVWDFPSQSRVMRW 260          
BLAST of EWM23416.1 vs. NCBI_GenBank
Match: gi|567970197|gb|ETK95244.1| (hypothetical protein L915_01807 [Phytophthora parasitica] >gi|570960284|gb|ETP25263.1| hypothetical protein F441_01844 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 110.538 bits (275), Expect = 3.923e-26
Identity = 66/151 (43.71%), Postives = 93/151 (61.59%), Query Frame = 0
Query:   64 KGYRYPAPGSRPK-VNVPQSESDDKLYDIKYFDHDTRRRP--AEVFSWSPDFKRVALPDSPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGEEEQ-IVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210
            +GYRYP+P  + + V+VP S+S + +Y+I+Y+  D RR P   EV    P        + P  AK  GSPGNKNPAVL YDPTG RSAMS T++  +K + +    HNVR+ W+G+ E+ I++D EAK LP  PG+   +  P+ +   RW
Sbjct:  112 QGYRYPSPDKQAEGVSVPSSDSKESIYNIQYYTRDIRRFPFPTEV-GMHPSIPVEKRAEIPADAK-RGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFEWEGDAEKDILEDLEAKNLPPTPGRPFVWDFPSQSRVMRW 260          
The following BLAST results are available for this feature:
BLAST of EWM23416.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104432|gb|EWM23416.1|9.259e-154100.00hypothetical protein Naga_100077g10 [Nannochlorops... [more]
gi|298714812|emb|CBJ25711.1|1.744e-3740.30conserved unknown protein [Ectocarpus siliculosus][more]
gi|953497315|emb|CEG41624.1|1.606e-2943.14hypothetical protein PHALS_11957 [Plasmopara halst... [more]
gi|1214713189|gb|OWZ24093.1|2.182e-2838.94hypothetical protein PHMEG_000944 [Phytophthora me... [more]
gi|635372610|emb|CCI39414.1|2.182e-2837.16unnamed protein product [Albugo candida][more]
gi|301097242|ref|XP_002897716.1|3.574e-2845.03conserved hypothetical protein [Phytophthora infes... [more]
gi|695417394|ref|XP_009527095.1|3.544e-2744.37hypothetical protein PHYSODRAFT_560449 [Phytophtho... [more]
gi|570336237|gb|ETO84185.1|2.665e-2643.71hypothetical protein F444_01887 [Phytophthora para... [more]
gi|566032547|gb|ETI55458.1|3.800e-2643.71hypothetical protein F443_01883 [Phytophthora para... [more]
gi|567970197|gb|ETK95244.1|3.923e-2643.71hypothetical protein L915_01807 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7281rna7281Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications