EWM23405.1, cds7263 (CDS) Nannochloropsis gaditana

Overview
NameEWM23405.1
Unique Namecds7263
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:216934..216941 -
Alignment locationCM002471.1:216060..216526 -
Alignment locationCM002471.1:215760..215776 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23405.1
Productdynein heavy chain
Orig transcript idgnl|cribi|Naga_100077g9.5195.mrna
GeneDYHC11
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:216934..216941 -
CM002471.1supercontigCM002471.1:216060..216526 -
CM002471.1supercontigCM002471.1:215760..215776 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003774motor activity
GO:0000166nucleotide binding
GO:0003777microtubule motor activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0007018microtubule-based movement
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
Vocabulary: INTERPRO
TermDefinition
IPR026983DHC_fam
IPR027417P-loop_NTPase
Homology
BLAST of EWM23405.1 vs. NCBI_GenBank
Match: gi|585104421|gb|EWM23405.1| (dynein heavy chain [Nannochloropsis gaditana])

HSP 1 Score: 335.109 bits (858), Expect = 2.060e-116
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
Query:    1 MLSITDVDFNYQYEYLGAKERLVVTPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLGLFVVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRILLPVLSVVAQQVLAIQNAKKAGVEYFQFPGDSQNVLLKPCCGFFITMNPGYAGRCET 163
            MLSITDVDFNYQYEYLGAKERLVVTPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLGLFVVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRILLPVLSVVAQQVLAIQNAKKAGVEYFQFPGDSQNVLLKPCCGFFITMNPGYAGRCET
Sbjct:    1 MLSITDVDFNYQYEYLGAKERLVVTPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLGLFVVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRILLPVLSVVAQQVLAIQNAKKAGVEYFQFPGDSQNVLLKPCCGFFITMNPGYAGRCET 163          
BLAST of EWM23405.1 vs. NCBI_GenBank
Match: gi|813133446|ref|XP_012197823.1| (hypothetical protein SPRG_03836 [Saprolegnia parasitica CBS 223.65] >gi|641537365|gb|KDO31218.1| hypothetical protein SPRG_03836 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 328.176 bits (840), Expect = 4.293e-101
Identity = 146/162 (90.12%), Postives = 156/162 (96.30%), Query Frame = 0
Query:    1 MLSITDVDFNYQYEYLGAKERLVVTPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLGLFVVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRILLPVLSVVAQQVLAIQNAKKAGVEYFQFPGDSQNVLLKPCCGFFITMNPGYAGRCE 162
            ++SITDVDFNYQ+EYLG+KERLVVTPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLG++VVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRI LPVLSVVAQQVLAIQNAKK G+++FQFPGD QN+LL P CGFFITMNPGYAGR E
Sbjct: 1773 VVSITDVDFNYQFEYLGSKERLVVTPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLGIYVVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRIQLPVLSVVAQQVLAIQNAKKTGIKFFQFPGDPQNILLLPVCGFFITMNPGYAGRQE 1934          
BLAST of EWM23405.1 vs. NCBI_GenBank
Match: gi|1173947926|gb|OQR96095.1| (dynein heavy chain [Achlya hypogyna])

HSP 1 Score: 328.176 bits (840), Expect = 4.890e-101
Identity = 146/162 (90.12%), Postives = 155/162 (95.68%), Query Frame = 0
Query:    1 MLSITDVDFNYQYEYLGAKERLVVTPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLGLFVVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRILLPVLSVVAQQVLAIQNAKKAGVEYFQFPGDSQNVLLKPCCGFFITMNPGYAGRCE 162
            ++SITDVDFNYQ+EYLG+KERLVVTPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLG++VVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRI LPVLSVVAQQVLAIQNAKK G ++FQFPGD QN+LL P CGFFITMNPGYAGR E
Sbjct: 1812 VVSITDVDFNYQFEYLGSKERLVVTPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLGIYVVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRIQLPVLSVVAQQVLAIQNAKKTGTKFFQFPGDPQNILLSPVCGFFITMNPGYAGRQE 1973          
BLAST of EWM23405.1 vs. NCBI_GenBank
Match: gi|673032676|ref|XP_008870299.1| (hypothetical protein H310_06866 [Aphanomyces invadans] >gi|574474299|gb|ETW01301.1| hypothetical protein H310_06866 [Aphanomyces invadans])

HSP 1 Score: 327.405 bits (838), Expect = 8.825e-101
Identity = 146/162 (90.12%), Postives = 154/162 (95.06%), Query Frame = 0
Query:    1 MLSITDVDFNYQYEYLGAKERLVVTPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLGLFVVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRILLPVLSVVAQQVLAIQNAKKAGVEYFQFPGDSQNVLLKPCCGFFITMNPGYAGRCE 162
            ++SITDVDFNYQ+EYLG+KERLVVTPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLG++VVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRI LPVLSVVAQQVLAIQNAKK   +YFQFPGD QN+LL P CGFFITMNPGYAGR E
Sbjct: 1813 VVSITDVDFNYQFEYLGSKERLVVTPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLGIYVVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRIQLPVLSVVAQQVLAIQNAKKTATKYFQFPGDPQNILLSPVCGFFITMNPGYAGRQE 1974          
BLAST of EWM23405.1 vs. NCBI_GenBank
Match: gi|669155648|ref|XP_008613386.1| (hypothetical protein SDRG_09245 [Saprolegnia diclina VS20] >gi|530735021|gb|EQC33263.1| hypothetical protein SDRG_09245 [Saprolegnia diclina VS20])

HSP 1 Score: 327.02 bits (837), Expect = 1.011e-100
Identity = 146/162 (90.12%), Postives = 155/162 (95.68%), Query Frame = 0
Query:    1 MLSITDVDFNYQYEYLGAKERLVVTPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLGLFVVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRILLPVLSVVAQQVLAIQNAKKAGVEYFQFPGDSQNVLLKPCCGFFITMNPGYAGRCE 162
            ++SITDVDFNYQ+EYLG+KERLVVTPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLG++VVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRI LPVLSVVAQQVLAIQN KK GV++FQFPGD QN+LL P CGFFITMNPGYAGR E
Sbjct: 1812 VVSITDVDFNYQFEYLGSKERLVVTPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLGIYVVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRIQLPVLSVVAQQVLAIQNGKKTGVKFFQFPGDPQNILLLPVCGFFITMNPGYAGRQE 1973          
BLAST of EWM23405.1 vs. NCBI_GenBank
Match: gi|1173961404|gb|OQS07437.1| (dynein heavy chain [Thraustotheca clavata])

HSP 1 Score: 327.02 bits (837), Expect = 1.040e-100
Identity = 146/162 (90.12%), Postives = 155/162 (95.68%), Query Frame = 0
Query:    1 MLSITDVDFNYQYEYLGAKERLVVTPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLGLFVVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRILLPVLSVVAQQVLAIQNAKKAGVEYFQFPGDSQNVLLKPCCGFFITMNPGYAGRCE 162
            ++SITDVDFNYQ+EYLG+KERLVVTPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLG++VVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRI LPVLSVVAQQVLAIQNAKK G ++FQFPGD QN+LL P CGFFITMNPGYAGR E
Sbjct: 1812 VVSITDVDFNYQFEYLGSKERLVVTPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLGIYVVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRIQLPVLSVVAQQVLAIQNAKKTGTKFFQFPGDPQNILLLPVCGFFITMNPGYAGRQE 1973          
BLAST of EWM23405.1 vs. NCBI_GenBank
Match: gi|298708134|emb|CBJ30475.1| (dynein heavy chain [Ectocarpus siliculosus])

HSP 1 Score: 326.635 bits (836), Expect = 1.460e-100
Identity = 145/162 (89.51%), Postives = 156/162 (96.30%), Query Frame = 0
Query:    1 MLSITDVDFNYQYEYLGAKERLVVTPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLGLFVVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRILLPVLSVVAQQVLAIQNAKKAGVEYFQFPGDSQNVLLKPCCGFFITMNPGYAGRCE 162
            +++ITDVDFNYQ+EYLG+KERLVVTPLTDR YITLAQALGMYFGGAPAGPAGTGKTE+VKDLGR LG+FVVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRILLPVLSVVAQQVLAIQNAKK G+++FQFPGD QN+LLKP CGFFITMNPGYAGR E
Sbjct: 1876 VIAITDVDFNYQFEYLGSKERLVVTPLTDRAYITLAQALGMYFGGAPAGPAGTGKTESVKDLGRALGIFVVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRILLPVLSVVAQQVLAIQNAKKTGMQFFQFPGDPQNILLKPVCGFFITMNPGYAGRQE 2037          
BLAST of EWM23405.1 vs. NCBI_GenBank
Match: gi|698780141|ref|XP_009823114.1| (hypothetical protein H257_01548 [Aphanomyces astaci] >gi|574122775|gb|ETV88251.1| hypothetical protein H257_01548 [Aphanomyces astaci])

HSP 1 Score: 325.865 bits (834), Expect = 3.018e-100
Identity = 145/162 (89.51%), Postives = 154/162 (95.06%), Query Frame = 0
Query:    1 MLSITDVDFNYQYEYLGAKERLVVTPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLGLFVVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRILLPVLSVVAQQVLAIQNAKKAGVEYFQFPGDSQNVLLKPCCGFFITMNPGYAGRCE 162
            ++SITDVDFNYQ+EYLG+KERLVVTPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLG++VVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRI LPVLSVVAQQVLAIQNAKK   ++FQFPGD QN+LL P CGFFITMNPGYAGR E
Sbjct: 1813 VVSITDVDFNYQFEYLGSKERLVVTPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLGIYVVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRIQLPVLSVVAQQVLAIQNAKKTATKFFQFPGDPQNILLSPVCGFFITMNPGYAGRQE 1974          
BLAST of EWM23405.1 vs. NCBI_GenBank
Match: gi|325182520|emb|CCA16975.1| (dynein heavy chain 5 putative [Albugo laibachii Nc14])

HSP 1 Score: 325.479 bits (833), Expect = 4.488e-100
Identity = 145/162 (89.51%), Postives = 153/162 (94.44%), Query Frame = 0
Query:    1 MLSITDVDFNYQYEYLGAKERLVVTPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLGLFVVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRILLPVLSVVAQQVLAIQNAKKAGVEYFQFPGDSQNVLLKPCCGFFITMNPGYAGRCE 162
            ++SITDVDFNYQYEYLG+KERLV+TPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLG++VVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRI LPVLSVVAQQVLAIQNAKK G + FQFPGD QN+ L P CGFFITMNPGYAGR E
Sbjct: 1849 VISITDVDFNYQYEYLGSKERLVITPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLGIYVVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRIQLPVLSVVAQQVLAIQNAKKTGTKSFQFPGDPQNITLSPVCGFFITMNPGYAGRQE 2010          
BLAST of EWM23405.1 vs. NCBI_GenBank
Match: gi|301112779|ref|XP_002998160.1| (dynein heavy chain [Phytophthora infestans T30-4] >gi|262112454|gb|EEY70506.1| dynein heavy chain [Phytophthora infestans T30-4])

HSP 1 Score: 324.709 bits (831), Expect = 6.937e-100
Identity = 145/162 (89.51%), Postives = 154/162 (95.06%), Query Frame = 0
Query:    1 MLSITDVDFNYQYEYLGAKERLVVTPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLGLFVVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRILLPVLSVVAQQVLAIQNAKKAGVEYFQFPGDSQNVLLKPCCGFFITMNPGYAGRCE 162
            ++SITDVDFNYQ+EYLG+KERLVVTPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLG++VVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRI LPVLSVVAQQVLAIQNAKK G +YFQFPGD QN+LL   CG+FITMNPGYAGR E
Sbjct: 1794 VISITDVDFNYQFEYLGSKERLVVTPLTDRCYITLAQALGMYFGGAPAGPAGTGKTETVKDLGRTLGIYVVVTNCTDQQKYTDCAKIFKGLCQGGLWGCFDEFNRIQLPVLSVVAQQVLAIQNAKKTGTKYFQFPGDPQNILLTQVCGYFITMNPGYAGRQE 1955          
The following BLAST results are available for this feature:
BLAST of EWM23405.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104421|gb|EWM23405.1|2.060e-116100.00dynein heavy chain [Nannochloropsis gaditana][more]
gi|813133446|ref|XP_012197823.1|4.293e-10190.12hypothetical protein SPRG_03836 [Saprolegnia paras... [more]
gi|1173947926|gb|OQR96095.1|4.890e-10190.12dynein heavy chain [Achlya hypogyna][more]
gi|673032676|ref|XP_008870299.1|8.825e-10190.12hypothetical protein H310_06866 [Aphanomyces invad... [more]
gi|669155648|ref|XP_008613386.1|1.011e-10090.12hypothetical protein SDRG_09245 [Saprolegnia dicli... [more]
gi|1173961404|gb|OQS07437.1|1.040e-10090.12dynein heavy chain [Thraustotheca clavata][more]
gi|298708134|emb|CBJ30475.1|1.460e-10089.51dynein heavy chain [Ectocarpus siliculosus][more]
gi|698780141|ref|XP_009823114.1|3.018e-10089.51hypothetical protein H257_01548 [Aphanomyces astac... [more]
gi|325182520|emb|CCA16975.1|4.488e-10089.51dynein heavy chain 5 putative [Albugo laibachii Nc... [more]
gi|301112779|ref|XP_002998160.1|6.937e-10089.51dynein heavy chain [Phytophthora infestans T30-4] ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7280rna7280Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications