EWM23424.1, cds7250 (CDS) Nannochloropsis gaditana

Overview
NameEWM23424.1
Unique Namecds7250
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:181911..182001 -
Alignment locationCM002471.1:181313..181806 -
Alignment locationCM002471.1:180833..181183 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23424.1
ProductAlpha-tubulin N-acetyltransferase
Orig transcript idgnl|cribi|Naga_100843g2.3628.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:181911..182001 -
CM002471.1supercontigCM002471.1:181313..181806 -
CM002471.1supercontigCM002471.1:180833..181183 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0019799tubulin N-acetyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0071929alpha-tubulin acetylation
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
GO:0005874microtubule
Vocabulary: INTERPRO
TermDefinition
IPR007965Alpha-TAT
Homology
BLAST of EWM23424.1 vs. NCBI_GenBank
Match: gi|585104445|gb|EWM23424.1| (Alpha-tubulin N-acetyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 607.06 bits (1564), Expect = 0.000e+0
Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0
Query:    1 METTKDRGCDHVAQDGRTSYTALRFDKAALACLPPSACAAIDSLAACSARAQGLRRPISTIRSLQASDDHILYILASTASNVADTPPPSASFLSSPPFVPSPPCSQPAEAVTPSTSPPYIFILPSSASFIAFDLPHAPSSPSLSSPLSPSSSLPCTASTPSPAASFPSSPSSSFLALGLLKLGQKHLYLTNPQGQLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFSPFPSLPSCSVTSSSPPCPPWCSSGGPLPFVNNHSLE 311
            METTKDRGCDHVAQDGRTSYTALRFDKAALACLPPSACAAIDSLAACSARAQGLRRPISTIRSLQASDDHILYILASTASNVADTPPPSASFLSSPPFVPSPPCSQPAEAVTPSTSPPYIFILPSSASFIAFDLPHAPSSPSLSSPLSPSSSLPCTASTPSPAASFPSSPSSSFLALGLLKLGQKHLYLTNPQGQLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFSPFPSLPSCSVTSSSPPCPPWCSSGGPLPFVNNHSLE
Sbjct:    1 METTKDRGCDHVAQDGRTSYTALRFDKAALACLPPSACAAIDSLAACSARAQGLRRPISTIRSLQASDDHILYILASTASNVADTPPPSASFLSSPPFVPSPPCSQPAEAVTPSTSPPYIFILPSSASFIAFDLPHAPSSPSLSSPLSPSSSLPCTASTPSPAASFPSSPSSSFLALGLLKLGQKHLYLTNPQGQLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFSPFPSLPSCSVTSSSPPCPPWCSSGGPLPFVNNHSLE 311          
BLAST of EWM23424.1 vs. NCBI_GenBank
Match: gi|553190554|ref|XP_005855214.1| (hypothetical protein NGA_0112700 [Nannochloropsis gaditana CCMP526] >gi|422293848|gb|EKU21148.1| hypothetical protein NGA_0112700 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 521.161 bits (1341), Expect = 0.000e+0
Identity = 280/323 (86.69%), Postives = 280/323 (86.69%), Query Frame = 0
Query:   32 CLPPSACAAIDSLAACSARAQGLRRPISTIRSLQASDDHILYILASTASNVADTPPPSASFLSSPPFVPSPPCSQPAEAVTPSTSPPYIFILPSSASFIAFDLPHAPSSPSLSSPLSPSSSLPCTASTPSPAASFPSSPSSSFLALGLLKLGQKHLYLTNPQG-------------------------------------------QLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFSPFPSLPSCSVTSSSPPCPPWCSSGGPLPFVNNHSLE 311
            CLPPSACAAIDSLAACSARAQGLRRPISTIRSLQASDDHILYILASTASNVADTPPPSASFLSSPPFVPSPPCSQPAEAVTPSTSPPYIFILPSSASFIAFDLPHAPSSPSLSSPLSPSSSLPCTASTPSPAASFPSSPSSSFLALGLLKLGQKHLYLTNPQG                                           QLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFSPFPSLPSCSVTSSSPPCPPWCSSGGPLPFVNNHSLE
Sbjct:   16 CLPPSACAAIDSLAACSARAQGLRRPISTIRSLQASDDHILYILASTASNVADTPPPSASFLSSPPFVPSPPCSQPAEAVTPSTSPPYIFILPSSASFIAFDLPHAPSSPSLSSPLSPSSSLPCTASTPSPAASFPSSPSSSFLALGLLKLGQKHLYLTNPQGQVRTCESKRTDHPAMSAPHIDMVSSADLPSPPYSLPPSLRLSLQLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFSPFPSLPSCSVTSSSPPCPPWCSSGGPLPFVNNHSLE 338          
BLAST of EWM23424.1 vs. NCBI_GenBank
Match: gi|301103035|ref|XP_002900604.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|313471324|sp|D0NK82.1|ATAT_PHYIT RecName: Full=Alpha-tubulin N-acetyltransferase; Short=Alpha-TAT; Short=TAT; AltName: Full=Acetyltransferase mec-17 homolog >gi|262101867|gb|EEY59919.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 107.071 bits (266), Expect = 1.716e-24
Identity = 52/154 (33.77%), Postives = 82/154 (53.25%), Query Frame = 0
Query:  122 ILPSSASFIAFDLPHAPSSPSLSSPLSPSSSLPCTASTPSPAASFPSSPSSSFLALGLLKLGQKHLYLTNPQGQLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFS 275
            + PSSA+       H  ++ +LS  ++ +     + +T        +        +G LK G KHL+  NP+G+  E +P C+LDF++   WQR+G+G  L +  L  E  + P  LA+DRPSP+L  FL KH  L ++  Q N F+V+D +F 
Sbjct:   31 VRPSSAT-------HRATAQTLSHEITSTDLFATSTATEQQQTLLLAINDDDGAVMGFLKTGVKHLFYLNPRGEYTEIDPICVLDFYVDEVWQRRGVGLQLFQRLLQEENTT-PAQLAYDRPSPKLFAFLKKHVGLTEYFPQPNRFVVFDAYFQ 176          
BLAST of EWM23424.1 vs. NCBI_GenBank
Match: gi|698790414|ref|XP_009828239.1| (hypothetical protein H257_05167 [Aphanomyces astaci] >gi|574117087|gb|ETV82570.1| hypothetical protein H257_05167 [Aphanomyces astaci])

HSP 1 Score: 103.99 bits (258), Expect = 1.182e-23
Identity = 48/98 (48.98%), Postives = 66/98 (67.35%), Query Frame = 0
Query:  178 GLLKLGQKHLYLTNPQGQLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFS 275
            G+LK+G+KHL+ + P+G  +E +P C+LDF++    QR GLG  L    L  E ++ PH LA+DRPSP+L PFL KHF L  +  Q N F+VYD +FS
Sbjct:   63 GVLKVGRKHLFYSKPRGGFIEMDPLCVLDFYVHPDRQRHGLGLHLFTSMLERESVA-PHQLAYDRPSPKLFPFLRKHFKLDSYVPQSNRFVVYDAYFS 159          
BLAST of EWM23424.1 vs. NCBI_GenBank
Match: gi|1214705117|gb|OWZ16865.1| (Alpha-tubulin N-acetyltransferase [Phytophthora megakarya])

HSP 1 Score: 103.99 bits (258), Expect = 1.606e-23
Identity = 46/101 (45.54%), Postives = 67/101 (66.34%), Query Frame = 0
Query:  175 LALGLLKLGQKHLYLTNPQGQLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFS 275
            +A+G LK G KHL+  +P+G+ +E +P C+LDF++   WQR+G+G  L +  L  E I+ P  LA+DRPSP+L  FL KH  L  H  Q N F+V+D++F 
Sbjct:   62 VAMGFLKTGIKHLFYMSPKGEYIEIDPICVLDFYVDENWQRRGVGLQLFQHLLHQENIA-PAQLAYDRPSPKLFAFLKKHAGLTDHFPQPNRFVVFDEYFQ 161          
BLAST of EWM23424.1 vs. NCBI_GenBank
Match: gi|678308628|emb|CDW90312.1| (alpha-tubulin n-acetyltransferase [Stylonychia lemnae])

HSP 1 Score: 107.457 bits (267), Expect = 7.137e-23
Identity = 46/107 (42.99%), Postives = 68/107 (63.55%), Query Frame = 0
Query:  178 GLLKLGQKHLYLTNPQGQLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFSPFPSLPSCS 284
            G+LK+G+K+L++ N  GQ+ E  P C+LDF++    QR G+G  L    L  E ++ P  L +DRPS +LL FLAKH+ LK++  Q N+F+VY  +F P  S  S +
Sbjct:   85 GILKVGKKNLFIRNESGQMTEIKPLCVLDFYVHESMQRNGIGKQLFERMLQVEKVN-PQRLGYDRPSEKLLSFLAKHYHLKRYVPQANNFVVYSQYFDPQVSTKSST 190          
BLAST of EWM23424.1 vs. NCBI_GenBank
Match: gi|673026784|ref|XP_008867353.1| (hypothetical protein H310_04679 [Aphanomyces invadans] >gi|574477400|gb|ETW04397.1| hypothetical protein H310_04679 [Aphanomyces invadans])

HSP 1 Score: 100.908 bits (250), Expect = 1.649e-22
Identity = 48/100 (48.00%), Postives = 65/100 (65.00%), Query Frame = 0
Query:  176 ALGLLKLGQKHLYLTNPQGQLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFS 275
            A G+LK+G+KHL+   P+G  +E +P C+LDFF+    QR GLG  L +  L  E I+ PH LA+DRPSP+L  F+ KHF L     Q N F++YD +FS
Sbjct:   61 AWGILKVGRKHLFYLTPRGDFMELDPLCVLDFFVHPQRQRHGLGLHLFKSMLERESIA-PHQLAYDRPSPKLFSFMRKHFGLDTFVDQPNRFVIYDAYFS 159          
BLAST of EWM23424.1 vs. NCBI_GenBank
Match: gi|1049254744|ref|XP_017566919.1| (PREDICTED: alpha-tubulin N-acetyltransferase 1 isoform X6 [Pygocentrus nattereri])

HSP 1 Score: 103.99 bits (258), Expect = 3.666e-22
Identity = 50/115 (43.48%), Postives = 67/115 (58.26%), Query Frame = 0
Query:  175 LALGLLKLGQKHLYLTNPQGQLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFSPFPSLPSCSVTSSS 289
            +A+G LK+G K L+L + +G  VET P C+LDF++    QR G G  L R  L H+ +  P  +A+DRPSP+ L FL KHF LK    Q N+F+V+D FF      P   VT   
Sbjct:   86 VAVGYLKVGYKKLFLLDQRGAHVETEPLCVLDFYVTENLQRHGYGLELFRFMLEHKKVE-PEQMAYDRPSPKFLAFLEKHFELKHSVPQVNNFVVFDGFFRNRSGTPPSPVTDQG 199          
BLAST of EWM23424.1 vs. NCBI_GenBank
Match: gi|1049254746|ref|XP_017566920.1| (PREDICTED: alpha-tubulin N-acetyltransferase 1 isoform X7 [Pygocentrus nattereri])

HSP 1 Score: 103.99 bits (258), Expect = 3.906e-22
Identity = 50/115 (43.48%), Postives = 67/115 (58.26%), Query Frame = 0
Query:  175 LALGLLKLGQKHLYLTNPQGQLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFSPFPSLPSCSVTSSS 289
            +A+G LK+G K L+L + +G  VET P C+LDF++    QR G G  L R  L H+ +  P  +A+DRPSP+ L FL KHF LK    Q N+F+V+D FF      P   VT   
Sbjct:   86 VAVGYLKVGYKKLFLLDQRGAHVETEPLCVLDFYVTENLQRHGYGLELFRFMLEHKKVE-PEQMAYDRPSPKFLAFLEKHFELKHSVPQVNNFVVFDGFFRNRSGTPPSPVTDQG 199          
BLAST of EWM23424.1 vs. NCBI_GenBank
Match: gi|403351420|gb|EJY75201.1| (Alpha-tubulin N-acetyltransferase (macronuclear) [Oxytricha trifallax])

HSP 1 Score: 104.375 bits (259), Expect = 4.431e-22
Identity = 50/142 (35.21%), Postives = 79/142 (55.63%), Query Frame = 0
Query:  141 PSLSSPLSPSSSLPCTASTPSPAASFPSSPSSSFLA------LGLLKLGQKHLYLTNPQGQLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFSP 276
              + S  + +  L C+ +T      F S  +  +L       LGLLK+G+++L++ N  GQ+ E  P C+LDF++    QR G+G  L    L+ E +  PH   +DRPS +LL FL+KH+ LKK+  Q N+F+V+  +F  
Sbjct:   44 DKMGSASAKAQKLGCSITTAQKF--FASDDNKLYLMVEGRQCLGLLKIGKRNLFIRNESGQMREIKPQCVLDFYVHESVQRNGIGKQLFERMLTQEKLQ-PHKFGYDRPSEKLLSFLSKHYYLKKYVPQANNFVVFSQYFDQ 182          
The following BLAST results are available for this feature:
BLAST of EWM23424.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104445|gb|EWM23424.1|0.000e+0100.00Alpha-tubulin N-acetyltransferase [Nannochloropsis... [more]
gi|553190554|ref|XP_005855214.1|0.000e+086.69hypothetical protein NGA_0112700 [Nannochloropsis ... [more]
gi|301103035|ref|XP_002900604.1|1.716e-2433.77conserved hypothetical protein [Phytophthora infes... [more]
gi|698790414|ref|XP_009828239.1|1.182e-2348.98hypothetical protein H257_05167 [Aphanomyces astac... [more]
gi|1214705117|gb|OWZ16865.1|1.606e-2345.54Alpha-tubulin N-acetyltransferase [Phytophthora me... [more]
gi|678308628|emb|CDW90312.1|7.137e-2342.99alpha-tubulin n-acetyltransferase [Stylonychia lem... [more]
gi|673026784|ref|XP_008867353.1|1.649e-2248.00hypothetical protein H310_04679 [Aphanomyces invad... [more]
gi|1049254744|ref|XP_017566919.1|3.666e-2243.48PREDICTED: alpha-tubulin N-acetyltransferase 1 iso... [more]
gi|1049254746|ref|XP_017566920.1|3.906e-2243.48PREDICTED: alpha-tubulin N-acetyltransferase 1 iso... [more]
gi|403351420|gb|EJY75201.1|4.431e-2235.21Alpha-tubulin N-acetyltransferase (macronuclear) [... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7267rna7267Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications