EWM23435.1, cds7239 (CDS) Nannochloropsis gaditana

Overview
NameEWM23435.1
Unique Namecds7239
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:132274..132307 +
Alignment locationCM002471.1:132694..132919 +
Alignment locationCM002471.1:133006..133099 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23435.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100275g2.7940.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:132274..132307 +
CM002471.1supercontigCM002471.1:132694..132919 +
CM002471.1supercontigCM002471.1:133006..133099 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23435.1 vs. NCBI_GenBank
Match: gi|585104462|gb|EWM23435.1| (hypothetical protein Naga_100275g2 [Nannochloropsis gaditana])

HSP 1 Score: 247.284 bits (630), Expect = 3.809e-83
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0 
Query:    1 MFEKAPTKETGTNDSTRVSARNLLGSTLASLEATQHISDVEPQGRKHILQCKMSTKPHTREACLHAPTWQYLSVSQDENTFSAWAPLRHYNCLVLQHVRDVYDLLKKGSVILSFRVV 117
            MFEKAPTKETGTNDSTRVSARNLLGSTLASLEATQHISDVEPQGRKHILQCKMSTKPHTREACLHAPTWQYLSVSQDENTFSAWAPLRHYNCLVLQHVRDVYDLLKKGSVILSFRVV
Sbjct:    1 MFEKAPTKETGTNDSTRVSARNLLGSTLASLEATQHISDVEPQGRKHILQCKMSTKPHTREACLHAPTWQYLSVSQDENTFSAWAPLRHYNCLVLQHVRDVYDLLKKGSVILSFRVV 117
The following BLAST results are available for this feature:
BLAST of EWM23435.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104462|gb|EWM23435.1|3.809e-83100.00hypothetical protein Naga_100275g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7256rna7256Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications