EWM23454.1, cds7218 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23454.1 vs. NCBI_GenBank
Match: gi|585104500|gb|EWM23455.1| (p-type atpase [Nannochloropsis gaditana]) HSP 1 Score: 546.199 bits (1406), Expect = 0.000e+0 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0 Query: 1 MGIQVWMLTGDSRAAAEAVAHSIGIKHVQAGTLPGQKAKKIQALQARGHRVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGWRLPPGYSGACSSLPARASRLPRLARDVMCWLTLSTLPPPFGLSVSPLPPPLQKRSGHDYVLPLCRHLLLGPPLLPTARLGQSWLDFCPAWARKTGEEGKDSLAAAAIGAGGSGAGGRRGRGQEERNEPRASGFR 272 MGIQVWMLTGDSRAAAEAVAHSIGIKHVQAGTLPGQKAKKIQALQARGHRVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGWRLPPGYSGACSSLPARASRLPRLARDVMCWLTLSTLPPPFGLSVSPLPPPLQKRSGHDYVLPLCRHLLLGPPLLPTARLGQSWLDFCPAWARKTGEEGKDSLAAAAIGAGGSGAGGRRGRGQEERNEPRASGFR Sbjct: 97 MGIQVWMLTGDSRAAAEAVAHSIGIKHVQAGTLPGQKAKKIQALQARGHRVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGWRLPPGYSGACSSLPARASRLPRLARDVMCWLTLSTLPPPFGLSVSPLPPPLQKRSGHDYVLPLCRHLLLGPPLLPTARLGQSWLDFCPAWARKTGEEGKDSLAAAAIGAGGSGAGGRRGRGQEERNEPRASGFR 368
BLAST of EWM23454.1 vs. NCBI_GenBank
Match: gi|585104499|gb|EWM23454.1| (p-type atpase [Nannochloropsis gaditana]) HSP 1 Score: 541.962 bits (1395), Expect = 0.000e+0 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0 Query: 1 MGIQVWMLTGDSRAAAEAVAHSIGIKHVQAGTLPGQKAKKIQALQARGHRVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGWRLPPGYSGACSSLPARASRLPRLARDVMCWLTLSTLPPPFGLSVSPLPPPLQKRSGHDYVLPLCRHLLLGPPLLPTARLGQSWLDFCPAWARKTGEEGKDSLAAAAIGAGGSGAGGRRGRGQEERNEPRASGFR 272 MGIQVWMLTGDSRAAAEAVAHSIGIKHVQAGTLPGQKAKKIQALQARGHRVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGWRLPPGYSGACSSLPARASRLPRLARDVMCWLTLSTLPPPFGLSVSPLPPPLQKRSGHDYVLPLCRHLLLGPPLLPTARLGQSWLDFCPAWARKTGEEGKDSLAAAAIGAGGSGAGGRRGRGQEERNEPRASGFR Sbjct: 1 MGIQVWMLTGDSRAAAEAVAHSIGIKHVQAGTLPGQKAKKIQALQARGHRVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGWRLPPGYSGACSSLPARASRLPRLARDVMCWLTLSTLPPPFGLSVSPLPPPLQKRSGHDYVLPLCRHLLLGPPLLPTARLGQSWLDFCPAWARKTGEEGKDSLAAAAIGAGGSGAGGRRGRGQEERNEPRASGFR 272
BLAST of EWM23454.1 vs. NCBI_GenBank
Match: gi|694439818|ref|XP_009346763.1| (PREDICTED: probable copper-transporting ATPase HMA5 [Pyrus x bretschneideri]) HSP 1 Score: 171.014 bits (432), Expect = 1.937e-46 Identity = 83/171 (48.54%), Postives = 117/171 (68.42%), Query Frame = 0 Query: 1 MGIQVWMLTGDSRAAAEAVAHSIGIKHVQAGTLPGQKAKKIQALQARGHRVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGWRLPPGYSGA----------CSSLPARASRLPRL 161 M ++ M+TGD+ A ++A +GI+ V A P QKA+K++ LQA G+ V M+GDGINDSPAL ADVG+AIG G +A EAAD++L+ ++L D++TA+HL+R F RI+LN +WALGYN++GIP AAGA P G+RLPP +GA C SL + + P++ Sbjct: 294 MKVRSIMVTGDNWGTANSIAKEVGIQTVIAEAKPDQKAEKVKDLQASGYTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLVKSNLEDVITAIHLSRKTFTRIRLNYIWALGYNVLGIPIAAGALFPPTGFRLPPWIAGAAMAASSVSVVCCSLLLKNYKKPKV 464
BLAST of EWM23454.1 vs. NCBI_GenBank
Match: gi|1129852552|gb|OLS20457.1| (Copper-exporting P-type ATPase A [Candidatus Heimdallarchaeota archaeon LC_3]) HSP 1 Score: 175.637 bits (444), Expect = 2.184e-46 Identity = 81/146 (55.48%), Postives = 105/146 (71.92%), Query Frame = 0 Query: 1 MGIQVWMLTGDSRAAAEAVAHSIGIKHVQAGTLPGQKAKKIQALQARGHRVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGWRLPPGYSG 146 +GIQ+WM+TGD+ A+A+A IGIK V A LPG+KA K++ LQ G V M+GDG+ND+PALAQADVG+AIG+G VA EA D+IL+ + D+VTA+ L+R RRI++NM WALGYN GIP A G F P + LPP +G Sbjct: 676 LGIQIWMVTGDNERTAQAIAKQIGIKEVFAEVLPGEKADKVKLLQDEGFIVGMVGDGVNDAPALAQADVGIAIGSGTDVAIEAGDIILMKDDPRDVVTAIDLSRKTMRRIRMNMFWALGYNSAGIPIAMGLFYPFIHLTLPPELAG 821
BLAST of EWM23454.1 vs. NCBI_GenBank
Match: gi|90079111|dbj|BAE89235.1| (unnamed protein product [Macaca fascicularis]) HSP 1 Score: 164.851 bits (416), Expect = 3.945e-46 Identity = 76/135 (56.30%), Postives = 101/135 (74.81%), Query Frame = 0 Query: 1 MGIQVWMLTGDSRAAAEAVAHSIGIKHVQAGTLPGQKAKKIQALQARGHRVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPI 135 MG+ V ++TGD+R A A+A +GI V A LP K K+Q LQ G RV M+GDG+NDSPALAQAD+GVAIGTG VA EAAD++L+ N L D+V ++HL++ + RRI++N++ AL YNL+GIP AAG F+PI Sbjct: 22 MGVDVVLITGDNRKTARAIATQVGINKVFAEVLPSHKVAKVQELQNEGKRVAMVGDGVNDSPALAQADMGVAIGTGTDVAIEAADVVLIRNDLLDVVASIHLSKRIVRRIRINLVLALIYNLVGIPIAAGVFMPI 156
BLAST of EWM23454.1 vs. NCBI_GenBank
Match: gi|1137182717|gb|OMO58678.1| (Cation-transporting P-type ATPase [Corchorus olitorius]) HSP 1 Score: 165.622 bits (418), Expect = 7.085e-46 Identity = 82/170 (48.24%), Postives = 114/170 (67.06%), Query Frame = 0 Query: 1 MGIQVWMLTGDSRAAAEAVAHSIGIKHVQAGTLPGQKAKKIQALQARGHRVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGWRLPPGYSGA----------CSSLPARASRLPR 160 M ++ M+TGD+ A ++A IGI+ V A P KA+K++ LQA G+ V M+GDGINDSPAL ADVG+AIG G +A EAAD++L+ ++L D++TA+ L+R F RI+LN +WALGYN++GIP AAGA P G+RLPP +GA C SL + + P+ Sbjct: 130 MNVRSIMVTGDNWGTASSIARQIGIETVVAEAKPEHKAEKVKDLQAAGYAVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNILGIPIAAGALFPSTGFRLPPWIAGAAMAASSVSVVCCSLLLKNYKRPK 299
BLAST of EWM23454.1 vs. NCBI_GenBank
Match: gi|1072928362|ref|XP_018474932.1| (PREDICTED: probable copper-transporting ATPase HMA5 [Raphanus sativus]) HSP 1 Score: 163.31 bits (412), Expect = 8.319e-46 Identity = 78/148 (52.70%), Postives = 103/148 (69.59%), Query Frame = 0 Query: 1 MGIQVWMLTGDSRAAAEAVAHSIGIKHVQAGTLPGQKAKKIQALQARGHRVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGWRLPPGYSGAC 148 M I M+TGD+ A ++A +GI V A P QKA+K++ LQ GH V M+GDGIND+PAL ADVG+AIG G +A EAAD++L+ ++L D++TA+ L+R F RI+LN +WALGYNLIGIP AAG P RLPP ++GA Sbjct: 66 MNIVSIMVTGDNWGTANSIAREVGIDFVMAEAKPKQKAEKVKELQEGGHVVAMVGDGINDAPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYVWALGYNLIGIPIAAGVLFPWTHLRLPPWFAGAA 213
BLAST of EWM23454.1 vs. NCBI_GenBank
Match: gi|1148386879|gb|OOK76930.1| (HAD ATPase, P-type, IC family protein [Mycobacterium kansasii]) HSP 1 Score: 161.384 bits (407), Expect = 2.019e-45 Identity = 88/165 (53.33%), Postives = 111/165 (67.27%), Query Frame = 0 Query: 1 MGIQVWMLTGDSRAAAEAVAHSIGIKHVQAGTLPGQKAKKIQALQARGHRVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGWRLPPGYSG---ACSSLPA--RASRLPR 160 +G+QV M+TGD+ A A+A +G+ V A LP KA +I+ LQA G RV M+GDGIND+PALAQADVG+AIGTG VA EAAD+IL+ SL +VTA+ L+R R I+ N+ +AL YN IGIP AAG P+LG RL P + A SSL A+RL R Sbjct: 19 LGLQVVMITGDNARTAAAIARQVGVSRVLAEVLPEHKASEIRRLQAEGRRVGMVGDGINDAPALAQADVGLAIGTGTDVAIEAADIILISGSLAGVVTAIRLSRATMRNIRQNLFFALIYNAIGIPLAAGVLYPLLGLRLSPMIAAGAMALSSLSVVGNANRLRR 183
BLAST of EWM23454.1 vs. NCBI_GenBank
Match: gi|1035926931|gb|OAY56518.1| (hypothetical protein MANES_02G023200 [Manihot esculenta] >gi|1035926932|gb|OAY56519.1| hypothetical protein MANES_02G023200 [Manihot esculenta]) HSP 1 Score: 172.94 bits (437), Expect = 2.118e-45 Identity = 86/177 (48.59%), Postives = 118/177 (66.67%), Query Frame = 0 Query: 1 MGIQVWMLTGDSRAAAEAVAHSIGIKHVQAGTLPGQKAKKIQALQARGHRVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGWRLPPGYSGACSSLPARASRLPRLARDVMCWLTLSTLPPP 177 M ++ M+TGD+ A ++A +GI+ V A T P QKA+K++ LQA G+ V M+GDGINDSPAL ADVG+AIG G +A EAAD++L+ ++L D++TA+ L+R F RI+LN +WALGYNL+GIP AAGA P G+RLPP +GA + + + VMC L L P Sbjct: 676 MKVRSIMVTGDNYGTANSIAREVGIETVMAETKPEQKAEKVKELQASGYVVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPGTGFRLPPWVAGAAMAASSVSV--------VMCSLLLKNYKRP 844
BLAST of EWM23454.1 vs. NCBI_GenBank
Match: gi|1130862620|dbj|GAV57945.1| (E1-E2_ATPase domain-containing protein/HMA domain-containing protein/Hydrolase domain-containing protein [Cephalotus follicularis]) HSP 1 Score: 173.326 bits (438), Expect = 2.186e-45 Identity = 78/147 (53.06%), Postives = 109/147 (74.15%), Query Frame = 0 Query: 1 MGIQVWMLTGDSRAAAEAVAHSIGIKHVQAGTLPGQKAKKIQALQARGHRVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGWRLPPGYSGA 147 + ++ M+TGD+ A+++A +GI +V P QKA+K++ LQA GH V M+GDGINDSPAL ADVG+AIG G +A EAAD++L+ ++L D++TA+ L+R F RI+LN +WALGYNL+GIP AAGA P+ G+RLPP +GA Sbjct: 737 LKVKSIMVTGDNWRTAKSIAKEVGIDYVIGEAKPDQKAEKVKELQASGHTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRNTFSRIRLNHIWALGYNLLGIPIAAGALFPLTGFRLPPWIAGA 883 The following BLAST results are available for this feature:
BLAST of EWM23454.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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