EWM23457.1, cds7216 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23457.1 vs. NCBI_GenBank
Match: gi|585104503|gb|EWM23457.1| (heavy metal translocating p-type atpase [Nannochloropsis gaditana]) HSP 1 Score: 145.591 bits (366), Expect = 2.660e-44 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
Query: 1 MRATSVGRDTALSQILALVQEAQLSKPPIQRYADRIASRFTPSVMLLATLVAVVWLAVGFAGWLPPSYLSHPA 73
MRATSVGRDTALSQILALVQEAQLSKPPIQRYADRIASRFTPSVMLLATLVAVVWLAVGFAGWLPPSYLSHPA
Sbjct: 1 MRATSVGRDTALSQILALVQEAQLSKPPIQRYADRIASRFTPSVMLLATLVAVVWLAVGFAGWLPPSYLSHPA 73
BLAST of EWM23457.1 vs. NCBI_GenBank
Match: gi|780056590|ref|XP_011669845.1| (PREDICTED: copper-transporting ATPase 1-like [Strongylocentrotus purpuratus]) HSP 1 Score: 73.9442 bits (180), Expect = 8.168e-16 Identity = 31/60 (51.67%), Postives = 46/60 (76.67%), Query Frame = 0
Query: 1 MRATSVGRDTALSQILALVQEAQLSKPPIQRYADRIASRFTPSVMLLATLVAVVWLAVGF 60
M AT VG+DTAL+QI+ LV++AQ SK PIQ+ AD+I+ RF P+++ L+ + +WL +GF
Sbjct: 2 MEATHVGKDTALAQIVKLVEDAQTSKAPIQQIADKISGRFVPAILFLSIITLGIWLTIGF 61
BLAST of EWM23457.1 vs. NCBI_GenBank
Match: gi|828229255|ref|XP_012564496.1| (PREDICTED: copper-transporting ATPase 1 [Hydra vulgaris]) HSP 1 Score: 77.0258 bits (188), Expect = 7.887e-15 Identity = 32/60 (53.33%), Postives = 47/60 (78.33%), Query Frame = 0
Query: 1 MRATSVGRDTALSQILALVQEAQLSKPPIQRYADRIASRFTPSVMLLATLVAVVWLAVGF 60
++A +VG +T LSQI+ LV+ AQ+SK PIQR+ADR+AS F P ++LL++ +VWL +GF
Sbjct: 651 IKAVNVGEETTLSQIVKLVENAQISKAPIQRFADRLASVFVPGIILLSSSTLIVWLVIGF 710
BLAST of EWM23457.1 vs. NCBI_GenBank
Match: gi|168045056|ref|XP_001774995.1| (predicted protein [Physcomitrella patens] >gi|162673742|gb|EDQ60261.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 76.6406 bits (187), Expect = 9.367e-15 Identity = 38/70 (54.29%), Postives = 50/70 (71.43%), Query Frame = 0
Query: 1 MRATSVGRDTALSQILALVQEAQLSKPPIQRYADRIASRFTPSVMLLATLVAVVWLAVGFAGWLPPSYLS 70
+RA VGRDTAL+QI+ LV+ AQ+SK PIQ++AD +AS F P V+LLA L +VW G G P S++S
Sbjct: 526 IRAMRVGRDTALAQIVNLVETAQMSKAPIQKFADYVASIFVPVVLLLAALTFMVWYVAGKMGAYPDSWIS 595
BLAST of EWM23457.1 vs. NCBI_GenBank
Match: gi|242001592|ref|XP_002435439.1| (copper-transporting ATPase 1, putative [Ixodes scapularis] >gi|215498775|gb|EEC08269.1| copper-transporting ATPase 1, putative, partial [Ixodes scapularis]) HSP 1 Score: 76.6406 bits (187), Expect = 1.198e-14 Identity = 35/61 (57.38%), Postives = 47/61 (77.05%), Query Frame = 0
Query: 1 MRATSVGRDTALSQILALVQEAQLSKPPIQRYADRIASRFTPSVMLLATLVAVVWLAVGFA 61
+ AT VG+DT L+QI+ LV+EAQ SK PIQ+ ADRIA F P+V+LL+ L +VW+ VGF+
Sbjct: 649 VNATHVGKDTTLAQIVKLVEEAQSSKAPIQQLADRIAGYFVPTVVLLSILTLIVWIVVGFS 709
BLAST of EWM23457.1 vs. NCBI_GenBank
Match: gi|1083364917|gb|OGE83126.1| (copper-translocating P-type ATPase, partial [Candidatus Delongbacteria bacterium GWF2_40_14]) HSP 1 Score: 76.2554 bits (186), Expect = 1.368e-14 Identity = 32/58 (55.17%), Postives = 46/58 (79.31%), Query Frame = 0
Query: 2 RATSVGRDTALSQILALVQEAQLSKPPIQRYADRIASRFTPSVMLLATLVAVVWLAVG 59
RA +G+DT LS+I+ LV++AQ+ K PIQRYAD+I+S F PSV+L+A + + WL+VG
Sbjct: 187 RAERIGKDTVLSRIIKLVEDAQIKKAPIQRYADKISSHFVPSVILIAAVTFIAWLSVG 244
BLAST of EWM23457.1 vs. NCBI_GenBank
Match: gi|966392063|ref|WP_058438827.1| (heavy metal translocating P-type ATPase [Dehalogenimonas alkenigignens] >gi|962029052|gb|KTB47911.1| ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase [Dehalogenimonas alkenigignens]) HSP 1 Score: 76.2554 bits (186), Expect = 1.674e-14 Identity = 34/67 (50.75%), Postives = 44/67 (65.67%), Query Frame = 0
Query: 1 MRATSVGRDTALSQILALVQEAQLSKPPIQRYADRIASRFTPSVMLLATLVAVVWLAVGFAGWLPPS 67
RAT VGR+TAL QI+ LV+EAQ +K PIQ+ ADR+A +F V +A +V V W +GF W P
Sbjct: 383 FRATRVGRETALGQIIKLVEEAQTTKAPIQKLADRVAGQFIAGVHAIALIVFVFWFFIGFEAWFTPD 449
BLAST of EWM23457.1 vs. NCBI_GenBank
Match: gi|1168894680|ref|XP_020489842.1| (copper-transporting ATPase 2-like [Labrus bergylta]) HSP 1 Score: 75.485 bits (184), Expect = 2.545e-14 Identity = 35/63 (55.56%), Postives = 45/63 (71.43%), Query Frame = 0
Query: 1 MRATSVGRDTALSQILALVQEAQLSKPPIQRYADRIASRFTPSVMLLATLVAVVWLAVGFAGW 63
+ AT VG DT L QI+ LV+EAQ SK PIQ++ADRI+ F P +ML++ L V WLAVGF +
Sbjct: 739 VEATHVGADTTLCQIVKLVEEAQTSKAPIQQFADRISGYFVPFIMLVSLLTLVAWLAVGFVNF 801
BLAST of EWM23457.1 vs. NCBI_GenBank
Match: gi|813177211|ref|XP_012205075.1| (hypothetical protein SPRG_20876 [Saprolegnia parasitica CBS 223.65] >gi|641530148|gb|KDO24290.1| hypothetical protein SPRG_20876 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 75.0998 bits (183), Expect = 3.251e-14 Identity = 39/69 (56.52%), Postives = 47/69 (68.12%), Query Frame = 0
Query: 1 MRATSVGRDTALSQILALVQEAQLSKPPIQRYADRIASRFTPSVMLLATLVAVVWLA-VGFAGWLPPSY 68
MR T VGRDTALSQI+ LV++AQ SK PIQ YAD+IAS F P V+ L+ L VW V F +PP +
Sbjct: 504 MRVTGVGRDTALSQIVRLVEDAQTSKAPIQAYADKIASVFVPIVLGLSVLTFAVWFGLVSFGYVVPPDH 572
BLAST of EWM23457.1 vs. NCBI_GenBank
Match: gi|1125420220|gb|OLD51345.1| (copper-translocating P-type ATPase, partial [Armatimonadetes bacterium 13_1_40CM_3_65_7]) HSP 1 Score: 75.0998 bits (183), Expect = 3.455e-14 Identity = 37/58 (63.79%), Postives = 43/58 (74.14%), Query Frame = 0
Query: 2 RATSVGRDTALSQILALVQEAQLSKPPIQRYADRIASRFTPSVMLLATLVAVVWLAVG 59
RAT VGRDT L+QI+ LVQEAQ SK PIQR ADR+AS F P+VM LA + + WL G
Sbjct: 113 RATKVGRDTVLAQIIQLVQEAQGSKAPIQRLADRVASYFVPAVMALAVVTFLTWLVFG 170 The following BLAST results are available for this feature:
BLAST of EWM23457.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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