EWM30615.1, cds72 (CDS) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	EWM30615.1
Unique Name	cds72
Type	CDS
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Alignment location	CM002455.1:200304..201394 +
Alignment location	CM002455.1:201745..201814 +

Link to JBrowse

Properties


Property Name	Value
Protein id	EWM30615.1
Product	protein kinase domain containing protein
Orig transcript id	gnl\|cribi\|Naga_100129g16.1893.mrna
Gbkey	CDS

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
CM002455.1	supercontig	CM002455.1:200304..201394 +
CM002455.1	supercontig	CM002455.1:201745..201814 +

Analyses

This CDS is derived from or has results from the following analyses


Analysis Name	Date Performed
GO annotation for N. gaditana B31	2020-04-08
BLAST analysis for N. gaditana B-31	2020-04-07
InterPro analysis for N. gaditana B-31	2020-04-06
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

The following terms have been associated with this CDS:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016301	kinase activity
GO:0000166	nucleotide binding
GO:0004672	protein kinase activity
GO:0005524	ATP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006464	cellular protein modification process
GO:0008219	cell death
GO:0006468	protein phosphorylation

Vocabulary: **INTERPRO**
Term	Definition
IPR011009	Kinase-like_dom
IPR015940	UBA/transl_elong_EF1B_N_euk
IPR017441	Protein_kinase_ATP_BS
IPR008271	Ser/Thr_kinase_AS
IPR000719	Prot_kinase_dom
IPR002290	Ser/Thr_dual-sp_kinase

Homology

[Close]

BLAST of EWM30615.1 vs. NCBI_GenBank
Match: gi|585113287|gb|EWM30615.1| (protein kinase domain containing protein [Nannochloropsis gaditana])

HSP 1 Score: 800.045 bits (2065), Expect = 0.000e+0
Identity = 386/386 (100.00%), Postives = 386/386 (100.00%), Query Frame = 0

Query:    1 MRRLGPYYLGQTIGEGTFGRVKAGVHALTGEKVAIKLLEKNRIVDAGDVRRVTREIDILKRNRHRNIIQLYDVLDTPARIYLVMENADGGELFDYIVKRQRVPEPEASAFFKQLVDGVGYLHAMEVTHRDLKPENLLLQSSKSAPGGWCVKIIDFGLSNTHEAGTLLSTACGSPCYACPEMIRGLAYRGPAADVWSMGVILYAMVCGYLPFEHTNISKLYHKILAGRYTVPSFLSPGVKDLIAKILVIDPQTRYSIPDIQRHPWYRQLGTGKRKDVKATQYQEARPPPGADCKEEEDGTGCSPPDVNVKLDENVLQEAVSLGLDREELLNALRLHAFGSLTATYHLLNRRRNSHGTPDFAGMDQGSNHLLLLAPSGIHRQQRQDQA 386
            MRRLGPYYLGQTIGEGTFGRVKAGVHALTGEKVAIKLLEKNRIVDAGDVRRVTREIDILKRNRHRNIIQLYDVLDTPARIYLVMENADGGELFDYIVKRQRVPEPEASAFFKQLVDGVGYLHAMEVTHRDLKPENLLLQSSKSAPGGWCVKIIDFGLSNTHEAGTLLSTACGSPCYACPEMIRGLAYRGPAADVWSMGVILYAMVCGYLPFEHTNISKLYHKILAGRYTVPSFLSPGVKDLIAKILVIDPQTRYSIPDIQRHPWYRQLGTGKRKDVKATQYQEARPPPGADCKEEEDGTGCSPPDVNVKLDENVLQEAVSLGLDREELLNALRLHAFGSLTATYHLLNRRRNSHGTPDFAGMDQGSNHLLLLAPSGIHRQQRQDQA
Sbjct:    1 MRRLGPYYLGQTIGEGTFGRVKAGVHALTGEKVAIKLLEKNRIVDAGDVRRVTREIDILKRNRHRNIIQLYDVLDTPARIYLVMENADGGELFDYIVKRQRVPEPEASAFFKQLVDGVGYLHAMEVTHRDLKPENLLLQSSKSAPGGWCVKIIDFGLSNTHEAGTLLSTACGSPCYACPEMIRGLAYRGPAADVWSMGVILYAMVCGYLPFEHTNISKLYHKILAGRYTVPSFLSPGVKDLIAKILVIDPQTRYSIPDIQRHPWYRQLGTGKRKDVKATQYQEARPPPGADCKEEEDGTGCSPPDVNVKLDENVLQEAVSLGLDREELLNALRLHAFGSLTATYHLLNRRRNSHGTPDFAGMDQGSNHLLLLAPSGIHRQQRQDQA 386

[Close]

BLAST of EWM30615.1 vs. NCBI_GenBank
Match: gi|570994114|gb|ETP51314.1| (CAMK/CAMKL/AMPK protein kinase [Phytophthora parasitica P10297])

HSP 1 Score: 380.948 bits (977), Expect = 8.648e-126
Identity = 191/356 (53.65%), Postives = 246/356 (69.10%), Query Frame = 0

Query:    4 LGPYYLGQTIGEGTFGRVKAGVHALTGEKVAIKLLEKNRIVDAGDVRRVTREIDILKRNRHRNIIQLYDVLDTPARIYLVMENADGGELFDYIVKRQRVPEPEASAFFKQLVDGVGYLHAMEVTHRDLKPENLLLQSS---------KSAPGGWCVKIIDFGLSNTHEAGTLLSTACGSPCYACPEMIRGLAYRGPAADVWSMGVILYAMVCGYLPFEHTNISKLYHKILAGRYTVPSFLSPGVKDLIAKILVIDPQTRYSIPDIQRHPWYRQLGTGKRKDVKATQYQEARPPPGADCKEEEDGTGCSPPDVNVKLDENVLQEAVSLGLDREELLNALRLHAFGSLTATYHLLNRR 350
            +G Y LG+TIG+GTFG+VK G+H LTGEKVA+K+LEK RIV A DV RV REI ILKRNRH N+IQLY+V+D+P RI+L+ME+ DGGE+F+YIV   R+ EPEA+  F+Q+V+G+ YLH+ EVTHRDLKPENLLLQS+         ++      VKI+DFGLSNTH+ G LL TACGSPCYA PEMI+G  YRGP AD+WS+GV+L+AMVCG+LPFE +N + LY KIL+  Y +P+FLS  V+DLI +IL  DP  RY++  I +HPW   L   ++ D+            G D     DGT         KL   VL +  SLGL  EE+ +AL   +F   TA+Y+LL+ +
Sbjct:   77 IGEYVLGETIGKGTFGKVKLGLHTLTGEKVAVKILEKKRIVQAADVERVAREIKILKRNRHPNVIQLYEVIDSPDRIFLIMEHIDGGEMFEYIVAHHRIREPEAAFLFRQIVEGLAYLHSNEVTHRDLKPENLLLQSNNHNSRQQQQQATDSTLLVKIVDFGLSNTHDGGRLLRTACGSPCYAAPEMIQGRLYRGPIADMWSLGVVLFAMVCGFLPFEDSNTNMLYKKILSANYKMPTFLSASVQDLIRRILETDPDKRYTVDKILQHPW---LAGVQKPDIS-----------GYDVG---DGTKSDELKTRHKL---VLSQLESLGLSAEEVQSALSKKSFNRFTASYYLLDSK 412

[Close]

BLAST of EWM30615.1 vs. NCBI_GenBank
Match: gi|567968210|gb|ETK93357.1| (CAMK/CAMKL/AMPK protein kinase [Phytophthora parasitica] >gi|567996664|gb|ETL46768.1| CAMK/CAMKL/AMPK protein kinase [Phytophthora parasitica])

HSP 1 Score: 381.333 bits (978), Expect = 4.829e-125
Identity = 191/356 (53.65%), Postives = 246/356 (69.10%), Query Frame = 0

Query:    4 LGPYYLGQTIGEGTFGRVKAGVHALTGEKVAIKLLEKNRIVDAGDVRRVTREIDILKRNRHRNIIQLYDVLDTPARIYLVMENADGGELFDYIVKRQRVPEPEASAFFKQLVDGVGYLHAMEVTHRDLKPENLLLQSS---------KSAPGGWCVKIIDFGLSNTHEAGTLLSTACGSPCYACPEMIRGLAYRGPAADVWSMGVILYAMVCGYLPFEHTNISKLYHKILAGRYTVPSFLSPGVKDLIAKILVIDPQTRYSIPDIQRHPWYRQLGTGKRKDVKATQYQEARPPPGADCKEEEDGTGCSPPDVNVKLDENVLQEAVSLGLDREELLNALRLHAFGSLTATYHLLNRR 350
            +G Y LG+TIG+GTFG+VK G+H LTGEKVA+K+LEK RIV A DV RV REI ILKRNRH N+IQLY+V+D+P RI+L+ME+ DGGE+F+YIV   R+ EPEA+  F+Q+V+G+ YLH+ EVTHRDLKPENLLLQS+         ++      VKI+DFGLSNTH+ G LL TACGSPCYA PEMI+G  YRGP AD+WS+GV+L+AMVCG+LPFE +N + LY KIL+  Y +P+FLS  V+DLI +IL  DP  RY++  I +HPW   L   ++ D+            G D     DGT         KL   VL +  SLGL  EE+ +AL   +F   TA+Y+LL+ +
Sbjct:   77 IGEYVLGETIGKGTFGKVKLGLHTLTGEKVAVKILEKKRIVQAADVERVAREIKILKRNRHPNVIQLYEVIDSPDRIFLIMEHIDGGEMFEYIVAHHRIREPEAAFLFRQIVEGLAYLHSNEVTHRDLKPENLLLQSNNHNSRQQQQQATDSTLLVKIVDFGLSNTHDGGRLLRTACGSPCYAAPEMIQGRLYRGPIADMWSLGVVLFAMVCGFLPFEDSNTNMLYKKILSANYKMPTFLSASVQDLIRRILETDPDKRYTVDKILQHPW---LAGVQKPDIS-----------GYDVG---DGTKSDELKTRHKL---VLSQLESLGLSAEEVQSALSKKSFNRFTASYYLLDSK 412

[Close]

BLAST of EWM30615.1 vs. NCBI_GenBank
Match: gi|953496774|emb|CEG41704.1| (camk camkl ampk protein kinase [Plasmopara halstedii])

HSP 1 Score: 381.333 bits (978), Expect = 1.534e-123
Identity = 187/352 (53.12%), Postives = 245/352 (69.60%), Query Frame = 0

Query:    4 LGPYYLGQTIGEGTFGRVKAGVHALTGEKVAIKLLEKNRIVDAGDVRRVTREIDILKRNRHRNIIQLYDVLDTPARIYLVMENADGGELFDYIVKRQRVPEPEASAFFKQLVDGVGYLHAMEVTHRDLKPENLLLQS-----SKSAPGGWCVKIIDFGLSNTHEAGTLLSTACGSPCYACPEMIRGLAYRGPAADVWSMGVILYAMVCGYLPFEHTNISKLYHKILAGRYTVPSFLSPGVKDLIAKILVIDPQTRYSIPDIQRHPWYRQLGTGKRKDVKATQYQEARPPPGADCKEEEDGTGCSPPDVNVKLDENVLQEAVSLGLDREELLNALRLHAFGSLTATYHLLNRR 350
            +G Y LG+TIG+GTFG+VK G+H LTGEKVA+K+LEK RI+ A D+ RV REI ILKRNRH N+IQLY+V+D P  IYL+ME+ DGGE+F+YIV  +R+ EPEA+  F+Q+VDG+ YLH+ +VTHRDLKPENLLLQS     ++S      VKI+DFGLSN H+ G LL TACGSPCYA PEMI+G  Y GP AD+WS+GV+L+AMVCGYLPFE +N + LY KIL   YT+P+FLS  V+DLI +IL  DP+ RY++ +I++HPW          DV+ + Y               D  G  P   +    E +L E  S+GL ++++L AL   +F   TA+Y+LLN +
Sbjct:   82 VGEYVLGETIGKGTFGKVKLGMHVLTGEKVAVKILEKKRIIRAADMDRVVREIKILKRNRHPNVIQLYEVIDAPDHIYLIMEHVDGGEMFEYIVAHRRICEPEAAYLFRQIVDGLAYLHSNKVTHRDLKPENLLLQSNPNVEAQSPLSTLVVKIVDFGLSNMHDGGRLLRTACGSPCYAAPEMIQGRLYCGPVADMWSLGVVLFAMVCGYLPFEDSNTNMLYKKILNANYTMPTFLSANVQDLIRRILETDPEKRYTVDNIRQHPWL--------ADVETSHYTLY------------DIYGGVPSQESTARHELILTELESMGLLKDDVLKALSEQSFNRFTASYYLLNNK 413

[Close]

BLAST of EWM30615.1 vs. NCBI_GenBank
Match: gi|568025888|gb|ETL99890.1| (CAMK/CAMKL/AMPK protein kinase [Phytophthora parasitica])

HSP 1 Score: 382.489 bits (981), Expect = 1.320e-122
Identity = 191/356 (53.65%), Postives = 246/356 (69.10%), Query Frame = 0

Query:    4 LGPYYLGQTIGEGTFGRVKAGVHALTGEKVAIKLLEKNRIVDAGDVRRVTREIDILKRNRHRNIIQLYDVLDTPARIYLVMENADGGELFDYIVKRQRVPEPEASAFFKQLVDGVGYLHAMEVTHRDLKPENLLLQSS---------KSAPGGWCVKIIDFGLSNTHEAGTLLSTACGSPCYACPEMIRGLAYRGPAADVWSMGVILYAMVCGYLPFEHTNISKLYHKILAGRYTVPSFLSPGVKDLIAKILVIDPQTRYSIPDIQRHPWYRQLGTGKRKDVKATQYQEARPPPGADCKEEEDGTGCSPPDVNVKLDENVLQEAVSLGLDREELLNALRLHAFGSLTATYHLLNRR 350
            +G Y LG+TIG+GTFG+VK G+H LTGEKVA+K+LEK RIV A DV RV REI ILKRNRH N+IQLY+V+D+P RI+L+ME+ DGGE+F+YIV   R+ EPEA+  F+Q+V+G+ YLH+ EVTHRDLKPENLLLQS+         ++      VKI+DFGLSNTH+ G LL TACGSPCYA PEMI+G  YRGP AD+WS+GV+L+AMVCG+LPFE +N + LY KIL+  Y +P+FLS  V+DLI +IL  DP  RY++  I +HPW   L   ++ D+            G D     DGT         KL   VL +  SLGL  EE+ +AL   +F   TA+Y+LL+ +
Sbjct:   77 IGEYVLGETIGKGTFGKVKLGLHTLTGEKVAVKILEKKRIVQAADVERVAREIKILKRNRHPNVIQLYEVIDSPDRIFLIMEHIDGGEMFEYIVAHHRIREPEAAFLFRQIVEGLAYLHSNEVTHRDLKPENLLLQSNNHNSRQQQQQATDSTLLVKIVDFGLSNTHDGGRLLRTACGSPCYAAPEMIQGRLYRGPIADMWSLGVVLFAMVCGFLPFEDSNTNMLYKKILSANYKMPTFLSASVQDLIRRILETDPDKRYTVDKILQHPW---LAGVQKPDIS-----------GYDVG---DGTKSDELKTRHKL---VLSQLESLGLSAEEVQSALSKKSFNRFTASYYLLDSK 412

[Close]

BLAST of EWM30615.1 vs. NCBI_GenBank
Match: gi|570958296|gb|ETP23275.1| (CAMK/CAMKL/AMPK protein kinase [Phytophthora parasitica CJ01A1])

HSP 1 Score: 382.874 bits (982), Expect = 1.376e-122
Identity = 191/356 (53.65%), Postives = 246/356 (69.10%), Query Frame = 0

Query:    4 LGPYYLGQTIGEGTFGRVKAGVHALTGEKVAIKLLEKNRIVDAGDVRRVTREIDILKRNRHRNIIQLYDVLDTPARIYLVMENADGGELFDYIVKRQRVPEPEASAFFKQLVDGVGYLHAMEVTHRDLKPENLLLQSS---------KSAPGGWCVKIIDFGLSNTHEAGTLLSTACGSPCYACPEMIRGLAYRGPAADVWSMGVILYAMVCGYLPFEHTNISKLYHKILAGRYTVPSFLSPGVKDLIAKILVIDPQTRYSIPDIQRHPWYRQLGTGKRKDVKATQYQEARPPPGADCKEEEDGTGCSPPDVNVKLDENVLQEAVSLGLDREELLNALRLHAFGSLTATYHLLNRR 350
            +G Y LG+TIG+GTFG+VK G+H LTGEKVA+K+LEK RIV A DV RV REI ILKRNRH N+IQLY+V+D+P RI+L+ME+ DGGE+F+YIV   R+ EPEA+  F+Q+V+G+ YLH+ EVTHRDLKPENLLLQS+         ++      VKI+DFGLSNTH+ G LL TACGSPCYA PEMI+G  YRGP AD+WS+GV+L+AMVCG+LPFE +N + LY KIL+  Y +P+FLS  V+DLI +IL  DP  RY++  I +HPW   L   ++ D+            G D     DGT         KL   VL +  SLGL  EE+ +AL   +F   TA+Y+LL+ +
Sbjct:   90 IGEYVLGETIGKGTFGKVKLGLHTLTGEKVAVKILEKKRIVQAADVERVAREIKILKRNRHPNVIQLYEVIDSPDRIFLIMEHIDGGEMFEYIVAHHRIREPEAAFLFRQIVEGLAYLHSNEVTHRDLKPENLLLQSNNHNSRQQQQQATDSTLLVKIVDFGLSNTHDGGRLLRTACGSPCYAAPEMIQGRLYRGPIADMWSLGVVLFAMVCGFLPFEDSNTNMLYKKILSANYKMPTFLSASVQDLIRRILETDPDKRYTVDKILQHPW---LAGVQKPDIS-----------GYDVG---DGTKSDELKTRHKL---VLSQLESLGLSAEEVQSALSKKSFNRFTASYYLLDSK 425

[Close]

BLAST of EWM30615.1 vs. NCBI_GenBank
Match: gi|675184383|ref|XP_008901076.1| (CAMK/CAMKL/AMPK protein kinase [Phytophthora parasitica INRA-310] >gi|568098943|gb|ETN13661.1| CAMK/CAMKL/AMPK protein kinase [Phytophthora parasitica INRA-310])

HSP 1 Score: 382.489 bits (981), Expect = 1.582e-122
Identity = 191/356 (53.65%), Postives = 246/356 (69.10%), Query Frame = 0

Query:    4 LGPYYLGQTIGEGTFGRVKAGVHALTGEKVAIKLLEKNRIVDAGDVRRVTREIDILKRNRHRNIIQLYDVLDTPARIYLVMENADGGELFDYIVKRQRVPEPEASAFFKQLVDGVGYLHAMEVTHRDLKPENLLLQSS---------KSAPGGWCVKIIDFGLSNTHEAGTLLSTACGSPCYACPEMIRGLAYRGPAADVWSMGVILYAMVCGYLPFEHTNISKLYHKILAGRYTVPSFLSPGVKDLIAKILVIDPQTRYSIPDIQRHPWYRQLGTGKRKDVKATQYQEARPPPGADCKEEEDGTGCSPPDVNVKLDENVLQEAVSLGLDREELLNALRLHAFGSLTATYHLLNRR 350
            +G Y LG+TIG+GTFG+VK G+H LTGEKVA+K+LEK RIV A DV RV REI ILKRNRH N+IQLY+V+D+P RI+L+ME+ DGGE+F+YIV   R+ EPEA+  F+Q+V+G+ YLH+ EVTHRDLKPENLLLQS+         ++      VKI+DFGLSNTH+ G LL TACGSPCYA PEMI+G  YRGP AD+WS+GV+L+AMVCG+LPFE +N + LY KIL+  Y +P+FLS  V+DLI +IL  DP  RY++  I +HPW   L   ++ D+            G D     DGT         KL   VL +  SLGL  EE+ +AL   +F   TA+Y+LL+ +
Sbjct:   90 IGEYVLGETIGKGTFGKVKLGLHTLTGEKVAVKILEKKRIVQAADVERVAREIKILKRNRHPNVIQLYEVIDSPDRIFLIMEHIDGGEMFEYIVAHHRIREPEAAFLFRQIVEGLAYLHSNEVTHRDLKPENLLLQSNNHNSRQQQQQATDSTLLVKIVDFGLSNTHDGGRLLRTACGSPCYAAPEMIQGRLYRGPIADMWSLGVVLFAMVCGFLPFEDSNTNMLYKKILSANYKMPTFLSASVQDLIRRILETDPDKRYTVDKILQHPW---LAGVQKPDIS-----------GYDVG---DGTKSDELKTRHKL---VLSQLESLGLSAEEVQSALSKKSFNRFTASYYLLDSK 425

[Close]

BLAST of EWM30615.1 vs. NCBI_GenBank
Match: gi|568056339|gb|ETM53051.1| (CAMK/CAMKL/AMPK protein kinase [Phytophthora parasitica])

HSP 1 Score: 382.489 bits (981), Expect = 1.687e-122
Identity = 191/356 (53.65%), Postives = 246/356 (69.10%), Query Frame = 0

Query:    4 LGPYYLGQTIGEGTFGRVKAGVHALTGEKVAIKLLEKNRIVDAGDVRRVTREIDILKRNRHRNIIQLYDVLDTPARIYLVMENADGGELFDYIVKRQRVPEPEASAFFKQLVDGVGYLHAMEVTHRDLKPENLLLQSS---------KSAPGGWCVKIIDFGLSNTHEAGTLLSTACGSPCYACPEMIRGLAYRGPAADVWSMGVILYAMVCGYLPFEHTNISKLYHKILAGRYTVPSFLSPGVKDLIAKILVIDPQTRYSIPDIQRHPWYRQLGTGKRKDVKATQYQEARPPPGADCKEEEDGTGCSPPDVNVKLDENVLQEAVSLGLDREELLNALRLHAFGSLTATYHLLNRR 350
            +G Y LG+TIG+GTFG+VK G+H LTGEKVA+K+LEK RIV A DV RV REI ILKRNRH N+IQLY+V+D+P RI+L+ME+ DGGE+F+YIV   R+ EPEA+  F+Q+V+G+ YLH+ EVTHRDLKPENLLLQS+         ++      VKI+DFGLSNTH+ G LL TACGSPCYA PEMI+G  YRGP AD+WS+GV+L+AMVCG+LPFE +N + LY KIL+  Y +P+FLS  V+DLI +IL  DP  RY++  I +HPW   L   ++ D+            G D     DGT         KL   VL +  SLGL  EE+ +AL   +F   TA+Y+LL+ +
Sbjct:   90 IGEYVLGETIGKGTFGKVKLGLHTLTGEKVAVKILEKKRIVQAADVERVAREIKILKRNRHPNVIQLYEVIDSPDRIFLIMEHIDGGEMFEYIVAHHRIREPEAAFLFRQIVEGLAYLHSNEVTHRDLKPENLLLQSNNHNSRQQQQQATDSTLLVKIVDFGLSNTHDGGRLLRTACGSPCYAAPEMIQGRLYRGPIADMWSLGVVLFAMVCGFLPFEDSNTNMLYKKILSANYKMPTFLSASVQDLIRRILETDPDKRYTVDKILQHPW---LAGVQKPDIS-----------GYDVG---DGTKSDELKTRHKL---VLSQLESLGLSAEEVQSALSNKSFNQFTASYYLLDSK 425

[Close]

BLAST of EWM30615.1 vs. NCBI_GenBank
Match: gi|570334240|gb|ETO82188.1| (CAMK/CAMKL/AMPK protein kinase [Phytophthora parasitica P1976])

HSP 1 Score: 382.489 bits (981), Expect = 1.760e-122
Identity = 191/356 (53.65%), Postives = 246/356 (69.10%), Query Frame = 0

Query:    4 LGPYYLGQTIGEGTFGRVKAGVHALTGEKVAIKLLEKNRIVDAGDVRRVTREIDILKRNRHRNIIQLYDVLDTPARIYLVMENADGGELFDYIVKRQRVPEPEASAFFKQLVDGVGYLHAMEVTHRDLKPENLLLQSS---------KSAPGGWCVKIIDFGLSNTHEAGTLLSTACGSPCYACPEMIRGLAYRGPAADVWSMGVILYAMVCGYLPFEHTNISKLYHKILAGRYTVPSFLSPGVKDLIAKILVIDPQTRYSIPDIQRHPWYRQLGTGKRKDVKATQYQEARPPPGADCKEEEDGTGCSPPDVNVKLDENVLQEAVSLGLDREELLNALRLHAFGSLTATYHLLNRR 350
            +G Y LG+TIG+GTFG+VK G+H LTGEKVA+K+LEK RIV A DV RV REI ILKRNRH N+IQLY+V+D+P RI+L+ME+ DGGE+F+YIV   R+ EPEA+  F+Q+V+G+ YLH+ EVTHRDLKPENLLLQS+         ++      VKI+DFGLSNTH+ G LL TACGSPCYA PEMI+G  YRGP AD+WS+GV+L+AMVCG+LPFE +N + LY KIL+  Y +P+FLS  V+DLI +IL  DP  RY++  I +HPW   L   ++ D+            G D     DGT         KL   VL +  SLGL  EE+ +AL   +F   TA+Y+LL+ +
Sbjct:   90 IGEYVLGETIGKGTFGKVKLGLHTLTGEKVAVKILEKKRIVQAADVERVAREIKILKRNRHPNVIQLYEVIDSPDRIFLIMEHIDGGEMFEYIVAHHRIREPEAAFLFRQIVEGLAYLHSNEVTHRDLKPENLLLQSNNHNSRQQQQQATDSTLLVKIVDFGLSNTHDGGRLLRTACGSPCYAAPEMIQGRLYRGPIADMWSLGVVLFAMVCGFLPFEDSNTNMLYKKILSANYKMPTFLSASVQDLIRRILETDPDKRYTVDKILQHPW---LAGVQKPDIS-----------GYDVG---DGTKSDELKTRHKL---VLSQLESLGLSAEEVQSALSKKSFNRFTASYYLLDSK 425

[Close]

BLAST of EWM30615.1 vs. NCBI_GenBank
Match: gi|301110082|ref|XP_002904121.1| (5'-AMP-activated protein kinase catalytic subunit, putative [Phytophthora infestans T30-4] >gi|262096247|gb|EEY54299.1| 5'-AMP-activated protein kinase catalytic subunit, putative [Phytophthora infestans T30-4])

HSP 1 Score: 379.022 bits (972), Expect = 3.025e-122
Identity = 187/350 (53.43%), Postives = 251/350 (71.71%), Query Frame = 0

Query:    4 LGPYYLGQTIGEGTFGRVKAGVHALTGEKVAIKLLEKNRIVDAGDVRRVTREIDILKRNRHRNIIQLYDVLDTPARIYLVMENADGGELFDYIVKRQRVPEPEASAFFKQLVDGVGYLHAMEVTHRDLKPENLLLQSSK---SAPGGWCVKIIDFGLSNTHEAGTLLSTACGSPCYACPEMIRGLAYRGPAADVWSMGVILYAMVCGYLPFEHTNISKLYHKILAGRYTVPSFLSPGVKDLIAKILVIDPQTRYSIPDIQRHPWYRQLGTGKRKDVKATQYQEARPPPGADCKEEEDGTGCSPPDVNVKLDENVLQEAVSLGLDREELLNALRLHAFGSLTATYHLLNRR 350
            +G Y LG+TIG+GTFG+VK G+H  TGEKVA+K+LEK RIV A DV RV REI ILKRNRH+N+IQLY+V+D+P RI+L+ME+ DGGE+F+YIV   R+ EPEA+  F+Q+V+G+ YLH+ EVTHRDLKPENLLLQS++   + P    VKI+DFGLSNTH+ G LL TACGSPCYA PEMI+G  YRGP AD+WS+GV+L+AMVCG+LPFE +N + LY KIL+  Y +P+FLS  V+DLI +IL  DP+ RY++  I +HPW   L   ++ D+            G D      G G +  ++  +  + VL +  SLGL  +E+ +AL  + F  +TA+Y+LL+ +
Sbjct:  100 VGEYVLGETIGKGTFGKVKLGLHLPTGEKVAVKILEKKRIVLAADVERVAREIKILKRNRHQNVIQLYEVIDSPDRIFLIMEHIDGGEMFEYIVAHHRIREPEAAFLFRQIVEGLAYLHSNEVTHRDLKPENLLLQSNRHNATDPSTLLVKIVDFGLSNTHDGGRLLRTACGSPCYAAPEMIQGRLYRGPIADMWSLGVVLFAMVCGFLPFEDSNTNMLYKKILSANYKMPTFLSANVQDLIRRILETDPEKRYTVDKILQHPW---LAGVQKPDIS-----------GYDV-----GGGANSDELKTR-HKLVLSQLESLGLPGDEVQSALSKNLFNRVTASYYLLDSK 429

The following BLAST results are available for this feature:

BLAST of EWM30615.1 vs. NCBI_GenBank

BLAST of EWM30615.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10


Match Name	E-value	Identity	Description
gi\|585113287\|gb\|EWM30615.1\|	0.000e+0	100.00	protein kinase domain containing protein [Nannochl...	[more]
gi\|570994114\|gb\|ETP51314.1\|	8.648e-126	53.65	CAMK/CAMKL/AMPK protein kinase [Phytophthora paras...	[more]
gi\|567968210\|gb\|ETK93357.1\|	4.829e-125	53.65	CAMK/CAMKL/AMPK protein kinase [Phytophthora paras...	[more]
gi\|953496774\|emb\|CEG41704.1\|	1.534e-123	53.13	camk camkl ampk protein kinase [Plasmopara halsted...	[more]
gi\|568025888\|gb\|ETL99890.1\|	1.320e-122	53.65	CAMK/CAMKL/AMPK protein kinase [Phytophthora paras...	[more]
gi\|570958296\|gb\|ETP23275.1\|	1.376e-122	53.65	CAMK/CAMKL/AMPK protein kinase [Phytophthora paras...	[more]
gi\|675184383\|ref\|XP_008901076.1\|	1.582e-122	53.65	CAMK/CAMKL/AMPK protein kinase [Phytophthora paras...	[more]
gi\|568056339\|gb\|ETM53051.1\|	1.687e-122	53.65	CAMK/CAMKL/AMPK protein kinase [Phytophthora paras...	[more]
gi\|570334240\|gb\|ETO82188.1\|	1.760e-122	53.65	CAMK/CAMKL/AMPK protein kinase [Phytophthora paras...	[more]
gi\|301110082\|ref\|XP_002904121.1\|	3.025e-122	53.43	5'-AMP-activated protein kinase catalytic subunit,...	[more]

Relationships

This CDS is a part of the following mRNA feature(s):


Feature Name	Unique Name	Species	Type
rna72	rna72	Nannochloropsis gaditana (N. gaditana B-31)	mRNA

Sequences

Synonyms

Publications