EWM23475.1, cds7198 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM23475.1 vs. NCBI_GenBank
Match: gi|585104542|gb|EWM23475.1| (hypothetical protein Naga_101028g2 [Nannochloropsis gaditana]) HSP 1 Score: 512.686 bits (1319), Expect = 0.000e+0 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0
Query: 1 MSFNPCPASAPPSWYPGEGLLVTADNVEFSLSLGRLPPRQSKATCKAKGRLHLTNIRLLFIATKPTASPVPGGPEFASFDVPLRGIVDVKFNQPIFGANNLQGKVTPVSCLEASAPVEWKAAFIAGGTTVLIPTLLRLMDQLHREAQGQAIPAQQLRTPQQQPHHGQPPQPQPHAPQQQQPWYGGEGTLPVAQAVAPGVEGGGYMDPSDPSRVLVDAPVATATYTNPMPHASAPPPSSGSSFNPPAYSGFSSGR 254
MSFNPCPASAPPSWYPGEGLLVTADNVEFSLSLGRLPPRQSKATCKAKGRLHLTNIRLLFIATKPTASPVPGGPEFASFDVPLRGIVDVKFNQPIFGANNLQGKVTPVSCLEASAPVEWKAAFIAGGTTVLIPTLLRLMDQLHREAQGQAIPAQQLRTPQQQPHHGQPPQPQPHAPQQQQPWYGGEGTLPVAQAVAPGVEGGGYMDPSDPSRVLVDAPVATATYTNPMPHASAPPPSSGSSFNPPAYSGFSSGR
Sbjct: 1 MSFNPCPASAPPSWYPGEGLLVTADNVEFSLSLGRLPPRQSKATCKAKGRLHLTNIRLLFIATKPTASPVPGGPEFASFDVPLRGIVDVKFNQPIFGANNLQGKVTPVSCLEASAPVEWKAAFIAGGTTVLIPTLLRLMDQLHREAQGQAIPAQQLRTPQQQPHHGQPPQPQPHAPQQQQPWYGGEGTLPVAQAVAPGVEGGGYMDPSDPSRVLVDAPVATATYTNPMPHASAPPPSSGSSFNPPAYSGFSSGR 254
BLAST of EWM23475.1 vs. NCBI_GenBank
Match: gi|553187655|ref|XP_005854651.1| (arabinogalactan protein [Nannochloropsis gaditana CCMP526] >gi|422294408|gb|EKU21708.1| arabinogalactan protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 441.425 bits (1134), Expect = 1.129e-155 Identity = 218/220 (99.09%), Postives = 218/220 (99.09%), Query Frame = 0
Query: 1 MSFNPCPASAPPSWYPGEGLLVTADNVEFSLSLGRLPPRQSKATCKAKGRLHLTNIRLLFIATKPTASPVPGGPEFASFDVPLRGIVDVKFNQPIFGANNLQGKVTPVSCLEASAPVEWKAAFIAGGTTVLIPTLLRLMDQLHREAQGQAIPAQQLRTPQQQPHHGQPPQPQPHAPQQQQPWYGGEGTLPVAQAVAPGVEGGGYMDPSDPSRVLVDAPVA 220
MSFNPCPASAPPSWYPGEGLLVTADNVEFSLSLGRLPPRQSKATCKAKGRLHLTNIRLLFIATKPTASPVPGGPEFASFDVPLRGIVDVKFNQPIFGANNLQGKVTPVSCLEASAPVEWKAAFIAGGTTVLIPTLLRLMDQLHREAQGQAIPAQQLRTPQQQPHHGQPPQPQPHAPQQQQPWYGGEG LPVAQAVAPGVEGGGYMDPSDPSRVLVDAPV
Sbjct: 1 MSFNPCPASAPPSWYPGEGLLVTADNVEFSLSLGRLPPRQSKATCKAKGRLHLTNIRLLFIATKPTASPVPGGPEFASFDVPLRGIVDVKFNQPIFGANNLQGKVTPVSCLEASAPVEWKAAFIAGGTTVLIPTLLRLMDQLHREAQGQAIPAQQLRTPQQQPHHGQPPQPQPHAPQQQQPWYGGEGNLPVAQAVAPGVEGGGYMDPSDPSRVLVDAPVV 220
BLAST of EWM23475.1 vs. NCBI_GenBank
Match: gi|553187658|ref|XP_005854652.1| (arabinogalactan protein [Nannochloropsis gaditana CCMP526] >gi|422294409|gb|EKU21709.1| arabinogalactan protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 337.035 bits (863), Expect = 4.296e-114 Identity = 221/260 (85.00%), Postives = 225/260 (86.54%), Query Frame = 0
Query: 1 MSFNPCPASAPPSWYPGEGLLVTADNVEFSLSLGRLPPRQSKATCKAKGRLHLTNIRLLFIATKPTASPVPGGPEFASFDVPLRGIVDVKFNQPIFGANNLQGKVTPVSCLEASAPVEWKAAFIAGGTTVLIPTLLRLMDQLHREAQGQAIPAQQLRTPQQQPHHGQPPQPQPHAPQQQQPW---YGGEGTLPVAQAVAPGVEGGGYMDPSDPSRV---LVDAPVATATYTNPMPHASAPPPSSGSSFNPPAYSGFSSGR 254
MSFNPCPASAPPSWYPGEGLLVTADNVEFSLSLGRLPPRQSKATCKAKGRLHLTNIRLLFIATKPTASPVPGGPEFASFDVPLRGIVDVKFNQPIFGANNLQGKVTPVSCLEASAPVEWKAAFIAGGTTVLIPTLLRLMDQLHREAQGQAIPAQQLRTPQQQPHHGQPPQPQPHAPQQQQP EG + G G + R ++ ATATYTNPMPHASAPPPSSGSSFNPPAYSGFSSGR
Sbjct: 1 MSFNPCPASAPPSWYPGEGLLVTADNVEFSLSLGRLPPRQSKATCKAKGRLHLTNIRLLFIATKPTASPVPGGPEFASFDVPLRGIVDVKFNQPIFGANNLQGKVTPVSCLEASAPVEWKAAFIAGGTTVLIPTLLRLMDQLHREAQGQAIPAQQLRTPQQQPHHGQPPQPQPHAPQQQQPCGEGGREEGVEEGREGGVEKARGVGKEKGKEGKRCTWGTLEEHQATATYTNPMPHASAPPPSSGSSFNPPAYSGFSSGR 260
BLAST of EWM23475.1 vs. NCBI_GenBank
Match: gi|1179558976|ref|XP_020699464.1| (uncharacterized protein LOC110111796 [Dendrobium catenatum]) HSP 1 Score: 88.1965 bits (217), Expect = 1.168e-17 Identity = 70/241 (29.05%), Postives = 108/241 (44.81%), Query Frame = 0
Query: 1 MSFNP-CPASAPPSWYPGEGLLVTADNVEFSLSLGRLPPRQSKATCKAKGRLHLTNIRLLFIATKPTASPVPGGPEFASFDVPLRGIVDVKFNQPIFGANNLQGKVTPVSCLEASAPV----EWKAAFIAGGTTVLIPTLLRLMDQLHREAQGQAIPAQQLRTPQQQPHHGQPPQPQPHAPQQQQPWYGGEGTLPVAQAVAPGVEGGGYMDPSDPSRVLVDAPVATA-----TYTNPMPHA 231
M+ NP ++ P + GE ++ D VEF + ++P S KAKG ++L+N+R++F+A KP + F +FD+PL I + KFNQPIF NN+ GKV PV E + +K F GG +P L L+ + Q PA+ + P+ P L AQ + Y+DP+DP+R+ + P + + TY P +A
Sbjct: 1 MALNPQLFSNGMPVPFLGEMFVLARDGVEFEVD--KIPGSGS-GHVKAKGIIYLSNVRIVFVAKKPVGN-------FVAFDMPLLHIHEDKFNQPIFHCNNISGKVEPVIPEEQHRALYSTHSFKILFKEGGCGTFVPLFLNLIQSVRHYNQHYNAPAEAV------------PRVDP---------------LQAAQTPVDEMIRSAYVDPNDPTRIFLQQPTSESQLRRRTYHQPAENA 204
BLAST of EWM23475.1 vs. NCBI_GenBank
Match: gi|1214687735|gb|OWZ03920.1| (Arabinogalactan protein [Phytophthora megakarya]) HSP 1 Score: 86.2705 bits (212), Expect = 1.654e-17 Identity = 46/119 (38.66%), Postives = 65/119 (54.62%), Query Frame = 0
Query: 43 ATCKAKGRLHLTNIRLLFIATKPTASPVPGGPEFASFDVPLRGIVDVKFNQPIFGANNLQGKVTPVSCLEASAPVEWKAAFIAGGTTVLIPTLLRLMDQLHREAQGQAIPAQQLRTPQQ 161
A K KGR++ T R++F+A K G F +F++PL + D KFNQPIFGA ++ G V P +E S WK F GGT V++P LRLM++ R+ +G + R P
Sbjct: 42 AVFKGKGRIYCTTQRIIFVAEKGITQ---NGCYFEAFEIPLVKMTDEKFNQPIFGACSISGLVAPSGSIEGSGNFSWKITFANGGTGVVLPVFLRLMEK--RKKKGSFTLSSYGRIPDN 155
BLAST of EWM23475.1 vs. NCBI_GenBank
Match: gi|1134889634|gb|OMJ86965.1| (hypothetical protein SteCoe_11438 [Stentor coeruleus]) HSP 1 Score: 88.1965 bits (217), Expect = 5.303e-17 Identity = 66/234 (28.21%), Postives = 103/234 (44.02%), Query Frame = 0
Query: 17 GEGLLVTADNVEFSLSLGRLPPRQSKATCKAKGRLHLTNIRLLFIATKPTASPVPGGPEFASFDVPLRGIVDVKFNQPIFGANNLQGKVTPVSCLEASAPVEWKAAFIAGGTTVLIPTLLRLMDQLHREAQGQAIPAQQLRTPQQQPHHGQPPQPQPHAPQQQQPWYGGEGTLP-VAQAVAPG-VEGGGYMDPSDPSRVLVDAPVA------TATYTNPMPHASAPPPSSGSSF 242
GE +++ ++E ++L ++ K KGRL+LT IRL+F+ K + +SFD+P+ + KFNQPIFGAN + G V P+ L ++K F++GGT +P ++DQ+ R G G P ++VA G ++ Y+DP+DPS + V P Y P+P A+APP SS+
Sbjct: 18 GEFMVLVRKDIEAEIAL------ENGTKYKGKGRLYLTTIRLVFVNEKRS--------NISSFDIPIDLMSHEKFNQPIFGANYISGSVKPLYNL-IPCNAKFKFWFMSGGTGTFLPMFYGIVDQIRRRRAN-----------------------------------GSNGPDPRFVESVASGNIQNVAYVDPNDPSVIFVLQPECPNPSQNNVNYYFPVPGATAPPLPMDSSY 201
BLAST of EWM23475.1 vs. NCBI_GenBank
Match: gi|1175867932|ref|XP_020587654.1| (uncharacterized protein LOC110029624 [Phalaenopsis equestris]) HSP 1 Score: 85.1149 bits (209), Expect = 1.809e-16 Identity = 65/226 (28.76%), Postives = 101/226 (44.69%), Query Frame = 0
Query: 15 YPGEGLLVTADNVEFSLSLGRLPPRQSKATCKAKGRLHLTNIRLLFIATKPTASPVPGGPEFASFDVPLRGIVDVKFNQPIFGANNLQGKVTPVSCLEASAPV----EWKAAFIAGGTTVLIPTLLRLMDQLHREAQGQAIPAQQLRTPQQQPHHGQPPQPQPHAPQQQQPWYGGEGTLPVAQAVAPGVEGGGYMDPSDPSRVLVDAPVATA-----TYTNPMPHA 231
+ GE ++ D VEF + ++P S KAKG ++++N+R++F++ KP + F +FD+PL I + KFNQPIF NN+ GKV PV E + +K F GG +P L L+ Q +R Q H+ + PH L AQ + Y+DP+DP+R+ + P + + TY P +A
Sbjct: 16 FVGEMFVLARDGVEFEVD--KIPGSGS-GHVKAKGIIYISNVRIVFVSKKPVGN-------FIAFDMPLLHIHEEKFNQPIFHCNNISGKVEPVIPEEHHRALYSTHSFKILFKEGGCGTFVPLFLNLI--------------QSVR--QYNQHYAAATEAAPHL-----------DPLQAAQTPVDEMMRCAYVDPNDPTRIFLQQPTSESQLRRRTYHQPAENA 204
BLAST of EWM23475.1 vs. NCBI_GenBank
Match: gi|586700289|ref|XP_006844782.1| (UPF0664 stress-induced protein C29B12.11c [Amborella trichopoda] >gi|548847253|gb|ERN06457.1| hypothetical protein AMTR_s00016p00259850 [Amborella trichopoda]) HSP 1 Score: 84.3445 bits (207), Expect = 3.848e-16 Identity = 59/208 (28.37%), Postives = 89/208 (42.79%), Query Frame = 0
Query: 15 YPGEGLLVTADNVEFSLSLGRLPPRQSKATCKAKGRLHLTNIRLLFIATKPTASPVPGGPEFASFDVPLRGIVDVKFNQPIFGANNLQGKVTPV----SCLEASAPVEWKAAFIAGGTTVLIPTLLRLMDQLHREAQGQAIPAQQLRTPQQQPHHGQPPQPQPHAPQQQQPWYGGEGTLPVAQAVAPGVEGGGYMDPSDPSRVLVDAP 218
+ E +++ D VEF + P KAKG ++L+N+R+LF+A KP +F +FD+PL + D KFNQPIF NN+ G V PV +P +K F GG +P L+ + + Q + TP+ P P PV + + Y+DPSDP+R+ + P
Sbjct: 16 FENEMFILSRDGVEFEIDKI---PTAPGGKIKAKGTIYLSNVRMLFVAKKPVG-------DFRAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSPHSFKILFKEGGCGTFVPLFFNLIASVKQYNQHVTNTSSNDHTPRVDPLQANQP--------------------PVDEMMR-----HAYVDPSDPTRIYLQQP 188
BLAST of EWM23475.1 vs. NCBI_GenBank
Match: gi|813185825|ref|XP_012207084.1| (hypothetical protein SPRG_12335 [Saprolegnia parasitica CBS 223.65] >gi|641527993|gb|KDO22249.1| hypothetical protein SPRG_12335 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 82.8037 bits (203), Expect = 5.906e-16 Identity = 44/105 (41.90%), Postives = 63/105 (60.00%), Query Frame = 0
Query: 46 KAKGRLHLTNIRLLFIATKPTASPVPGGPEFASFDVPLRGIVDVKFNQPIFGANNLQGKVTPVSCLE--ASAPVEWKAAFIAGGTTVLIPTLLRLMDQLHREAQG 148
KA GR+++T RL+F A K + G F +F++PL I D KFNQP+FG+ N+ G V PV E + P+EW+ +F GGT +P LRLM+ H++ G
Sbjct: 43 KATGRIYITTQRLVFCADK---AATQHGRFFQAFEIPLDNIADDKFNQPMFGSCNISGDVFPVGTDEGDVATPIEWRVSFPNGGTGTFLPIFLRLME--HKKHAG 142
BLAST of EWM23475.1 vs. NCBI_GenBank
Match: gi|1035914191|gb|OAY43784.1| (hypothetical protein MANES_08G097600 [Manihot esculenta]) HSP 1 Score: 83.5741 bits (205), Expect = 6.010e-16 Identity = 67/223 (30.04%), Postives = 96/223 (43.05%), Query Frame = 0
Query: 1 MSFNP-CPASAPPSWYPGEGLLVTADNVEFSLSLGRLPPRQSKATCKAKGRLHLTNIRLLFIATKPTASPVPGGPEFASFDVPLRGIVDVKFNQPIFGANNLQGKVTPVSCLEASAPV----EWKAAFIAGGTTVLIPTLLRLMDQLHREAQGQAIPAQQLRTPQQQPHHGQPPQPQPHAPQQQQPWYGGEGTLPVAQAVAPGVEGGGYMDPSDPSRVLVDAP 218
M+ NP + P + E ++T D VEF + ++P KAKG ++L+NIR++F+A KP + F +FD+PL I KFNQPIF NN+ G V PV +A + +K F GG IP L+ +R QQ G PQ P L AQ + Y+DP+DP+R+ + P
Sbjct: 1 MALNPQLFQNGMPVPFVNEIFVLTRDGVEFEID--KIPGSHG-GHVKAKGIIYLSNIRMVFVAYKPVGN-------FTAFDMPLLYIHGEKFNQPIFFCNNVSGLVEPVVPENENAALYSTHSFKILFKEGGCGTFIPLFFNLLS--------------SVRQYNQQQTSGMGPQMNP---------------LVAAQTPVDEMMRHAYVDPNDPTRIFLQQP 184 The following BLAST results are available for this feature:
BLAST of EWM23475.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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