EWM23487.1, cds7179 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM23487.1 vs. NCBI_GenBank
Match: gi|585104557|gb|EWM23487.1| (hypothetical protein Naga_100198g3 [Nannochloropsis gaditana]) HSP 1 Score: 779.63 bits (2012), Expect = 0.000e+0 Identity = 382/382 (100.00%), Postives = 382/382 (100.00%), Query Frame = 0 Query: 1 MLRRRRKRLLSTSASILGLFVVVILLLLPTRAAALSRKQRILNWFAEASQGGGDQKANKAVEDEALAVNSLTSIMKSSGESLPGTIAPPPLLDQMLTLFASLGLPPDTLSHMSELTPEEIVHGLSTVMPTKTLHLRVGDEAVVDEATTLELTGVTDNRCPIGAQCITDGKATAMLTVRQEMIVPYKIEVGLGRAVLLQRGYEVSCEEITPRPGALVSSVLVSTSPSTELVEGSKTGAEQSEYRVRLRVALPTERMNGLVQGVLKWVKSNAMVRGYEFSQRRMCFCPQATIRPVRLDVSAWSQGVKGVYEDRPNGAVPPEALAEYKTVGDLFLLLTQAYALNADRVEASYDPVFGYPNRIYIDQSADMADDDVMYEASALKIK 382 MLRRRRKRLLSTSASILGLFVVVILLLLPTRAAALSRKQRILNWFAEASQGGGDQKANKAVEDEALAVNSLTSIMKSSGESLPGTIAPPPLLDQMLTLFASLGLPPDTLSHMSELTPEEIVHGLSTVMPTKTLHLRVGDEAVVDEATTLELTGVTDNRCPIGAQCITDGKATAMLTVRQEMIVPYKIEVGLGRAVLLQRGYEVSCEEITPRPGALVSSVLVSTSPSTELVEGSKTGAEQSEYRVRLRVALPTERMNGLVQGVLKWVKSNAMVRGYEFSQRRMCFCPQATIRPVRLDVSAWSQGVKGVYEDRPNGAVPPEALAEYKTVGDLFLLLTQAYALNADRVEASYDPVFGYPNRIYIDQSADMADDDVMYEASALKIK Sbjct: 1 MLRRRRKRLLSTSASILGLFVVVILLLLPTRAAALSRKQRILNWFAEASQGGGDQKANKAVEDEALAVNSLTSIMKSSGESLPGTIAPPPLLDQMLTLFASLGLPPDTLSHMSELTPEEIVHGLSTVMPTKTLHLRVGDEAVVDEATTLELTGVTDNRCPIGAQCITDGKATAMLTVRQEMIVPYKIEVGLGRAVLLQRGYEVSCEEITPRPGALVSSVLVSTSPSTELVEGSKTGAEQSEYRVRLRVALPTERMNGLVQGVLKWVKSNAMVRGYEFSQRRMCFCPQATIRPVRLDVSAWSQGVKGVYEDRPNGAVPPEALAEYKTVGDLFLLLTQAYALNADRVEASYDPVFGYPNRIYIDQSADMADDDVMYEASALKIK 382
BLAST of EWM23487.1 vs. NCBI_GenBank
Match: gi|488796571|ref|WP_002708977.1| (hypothetical protein [Thiothrix nivea] >gi|386421230|gb|EIJ35065.1| hypothetical protein Thini_2522 [Thiothrix nivea DSM 5205]) HSP 1 Score: 72.0182 bits (175), Expect = 7.186e-11 Identity = 34/107 (31.78%), Postives = 62/107 (57.94%), Query Frame = 0 Query: 275 YEFSQRRMCFCPQATIRPVRLDVSAWS-QGVKGVYEDRPNGAVPPEALAEYKTVGDLFLLLTQAYALNADRVEASYDPVFGYPNRIYIDQSADMADDDVMYEASALK 380 Y ++ +R CFCP+ ++P+ + V S Q + + E +P +P E + DLF ++ +A A ++ +YDP++G+P ++IDQ +MAD+++ Y AS K Sbjct: 124 YTYTLQRSCFCPKDFLKPLEIRVFKNSVQQARIMPEGKP---LPKSRKGEALVIEDLFAVIHRAINSQAAAIDVTYDPLYGFPTTLFIDQDKNMADEEISYAASNFK 227
BLAST of EWM23487.1 vs. NCBI_GenBank
Match: gi|1155017993|ref|WP_078923313.1| (hypothetical protein [Thiothrix eikelboomii] >gi|1152188896|emb|SKA87687.1| hypothetical protein SAMN02745130_02855 [Thiothrix eikelboomii]) HSP 1 Score: 71.2478 bits (173), Expect = 2.058e-10 Identity = 46/160 (28.75%), Postives = 77/160 (48.12%), Query Frame = 0 Query: 229 LVEGSKTGAEQSEYRVRLRVALPTERMNG-------LVQGVLKWVKSNAMVRGYEFSQRRMCFCPQATIRPVRLDVSAWSQGVKGVYEDRPNGAVPPEALAEYKTVGDLFLLLTQAYALNADRVEASYDPVFGYPNRIYIDQSADMADDDVMYEASALKI 381 +V G TG E + + + + +++NG V KW + + + ++ + CFCP+ RP+ + + V Y D AVP T+ + F L AY A+R++A+YDP GYP+ +YIDQS MAD+++ Y L++ Sbjct: 115 IVSGGITGGEITRHTLTQK---DIDQLNGKTDLPADFVASRAKWDAATSDGQTASYTAQSSCFCPEDYTRPMNI-TEQNGKIVDATYADTGE-AVPNYIRDGLLTMNERFDQLQDAYLSGAERIDATYDPQLGYPSSVYIDQSFMMADEEISYNIKDLEL 269
BLAST of EWM23487.1 vs. NCBI_GenBank
Match: gi|1197737467|ref|WP_086687389.1| (hypothetical protein [Nostoc sp. T09] >gi|1196011809|gb|OUL33798.1| hypothetical protein BV372_15395 [Nostoc sp. T09]) HSP 1 Score: 66.2402 bits (160), Expect = 1.894e-9 Identity = 38/124 (30.65%), Postives = 58/124 (46.77%), Query Frame = 0 Query: 249 ALPTERMNGLVQGVLKWVKSNAMVRGYEFSQRRMCFCPQATIRPVRLDVSAWSQGVKGVYEDRPNGAVPPEALAEYKTVGDLFLLLTQAYALNADRVEASYDPVFGYPNRIYIDQSADMADDDV 372 A+ ++N L W K N +R Y + R CFC P+ + V +G K D +V E +Y T+ LF ++ A A A + YDP GYP +I ID ++ MAD+++ Sbjct: 34 AIAKSQLNQLTINRQLWKKQN--IRNYRYQLSRSCFCAPKASGPIVVKVR---KGKKTSITDAAGQSVDQEIFKQYDTIPKLFNVIEDAIAKKASNLTVQYDPKLGYPTQINIDYNSQMADEEI 152
BLAST of EWM23487.1 vs. NCBI_GenBank
Match: gi|495552411|ref|WP_008276990.1| (hypothetical protein [Cyanothece sp. CCY0110] >gi|126619178|gb|EAZ89915.1| hypothetical protein CY0110_14003 [Cyanothece sp. CCY0110]) HSP 1 Score: 66.2402 bits (160), Expect = 2.051e-9 Identity = 33/108 (30.56%), Postives = 55/108 (50.93%), Query Frame = 0 Query: 272 VRGYEFSQRRMCFCPQATIRPVRLDVSAWSQGVKGVYEDRPNGAVPPEALAEYKTVGDLFLLLTQAYALNADRVEASYDPVFGYPNRIYIDQSADMADDDVMYEASAL 379 ++ Y++ ++ CFCP + P++ VS + + V N + L KT+ +LF ++ A NAD + +YDP GYP R+ ID +ADD++ Y L Sbjct: 51 LKNYQYIYQQQCFCPLPSNVPLK--VSVKNDKITQVVNLNNNQVITDLTLP--KTIEELFKIIKDAIQRNADEILITYDPTLGYPTRVAIDYQKILADDEITYTVKNL 154
BLAST of EWM23487.1 vs. NCBI_GenBank
Match: gi|1210105532|dbj|BAY24662.1| (hypothetical protein NIES2100_44570 [Calothrix sp. NIES-2100]) HSP 1 Score: 66.2402 bits (160), Expect = 2.237e-9 Identity = 40/120 (33.33%), Postives = 57/120 (47.50%), Query Frame = 0 Query: 254 RMNGLVQGVLKWVKSNAMVRGYEFSQRRMCFCPQATIRPVRLDVSAWSQGVKGVYEDRPNGAVP-PEALAEYKTVGDLFLLLTQAYALNADRVEASYDPVFGYPNRIYIDQSADMADDDV 372 ++N L W K N +R Y ++ R CFC + P+R+ V G K D PE EY TV LF L+ A A A + YDP GYP +I ID ++ +AD+++ Sbjct: 39 QLNQLNANRRLWKKQN--IRNYRYTLSRSCFCAPKSTGPLRITVR---NGRKTSITDATGKPFEQPELFKEYDTVPKLFNLIEDAIAKKASNLTVQYDPKLGYPTQINIDYNSQIADEEL 153
BLAST of EWM23487.1 vs. NCBI_GenBank
Match: gi|1201341825|ref|WP_087593281.1| (hypothetical protein [unicellular cyanobacterium SU3]) HSP 1 Score: 65.4698 bits (158), Expect = 3.145e-9 Identity = 33/108 (30.56%), Postives = 54/108 (50.00%), Query Frame = 0 Query: 272 VRGYEFSQRRMCFCPQATIRPVRLDVSAWSQGVKGVYEDRPNGAVPPEALAEYKTVGDLFLLLTQAYALNADRVEASYDPVFGYPNRIYIDQSADMADDDVMYEASAL 379 + Y++ ++ CFCP + P++ VS + + V N + L KT+ +LF ++ A NAD + +YDP GYP R+ ID +ADD++ Y L Sbjct: 51 IENYQYIYQQRCFCPLPSNEPLK--VSVKNDKITQVVNLNNNQVITDLTLP--KTIEELFNIIKDAIQRNADEILITYDPTLGYPTRVEIDYQKILADDEITYTVKDL 154
BLAST of EWM23487.1 vs. NCBI_GenBank
Match: gi|1210111815|dbj|BAY30943.1| (hypothetical protein NIES2107_27910 [Nostoc carneum NIES-2107]) HSP 1 Score: 64.6994 bits (156), Expect = 7.980e-9 Identity = 47/163 (28.83%), Postives = 74/163 (45.40%), Query Frame = 0 Query: 211 RPGALVSSVLVSTSPSTELVEG-SKTGAEQSEYRVRLRVALPTERMNGLVQGVLKWVKSNAMVRGYEFSQRRMCFCPQATIRPVRLDVSAWSQGVKGVYEDRPNGAVPPEALAEYKTVGDLFLLLTQAYALNADRVEASYDPVFGYPNRIYIDQSADMADDDV 372 R G +VS+ LVST L G +K QS ++ A+ + Q W S +R Y + R CFC + PV ++V G D+ V PE EY T+ +F ++ A A A + +Y+ GYP ++ ID ++ MAD+++ Sbjct: 2 RLGIIVSAGLVSTG--LLLALGLNKPAISQSPTQIAQSSAIANTNLQEFRQNRRVW--SQQRIRNYRYKVSRSCFCTEEARGPVTIEVR---NGQTTSITDKNGKKVNPELFQEYSTLPKVFNVIRDAIAKKASSLNVNYNKKLGYPTQVNIDYNSQMADEEL 157
BLAST of EWM23487.1 vs. NCBI_GenBank
Match: gi|1210089760|dbj|BAY08896.1| (hypothetical protein NIES2098_20570 [Calothrix sp. NIES-2098]) HSP 1 Score: 64.3142 bits (155), Expect = 1.023e-8 Identity = 37/116 (31.90%), Postives = 53/116 (45.69%), Query Frame = 0 Query: 265 WVKSNAMVRGYEFSQRRMCFCPQATIRPVRLDVSAWSQGVKGVYEDRPNGAVPPEALAEYKTVGDLFLLLTQAYALNADRVEASYDPVFGYPNRIYIDQSADMADDDVMYEASALK 380 W K N +R Y + R CFC PV + V QG D + E +Y T+ LF ++ A A A + YDP FGYP +I ID ++ MAD+++ L+ Sbjct: 50 WKKQN--IRNYRYKFSRSCFCAPKASGPVVVKVR---QGRTTSMTDAAGKPIERELFQQYDTIPKLFNVIEDAIAKKASSLTVQYDPKFGYPTQINIDYNSQMADEELYLTIEGLQ 160
BLAST of EWM23487.1 vs. NCBI_GenBank
Match: gi|1210229608|dbj|BAZ48629.1| (hypothetical protein NIES4103_12370 [Nostoc sp. NIES-4103]) HSP 1 Score: 63.5438 bits (153), Expect = 1.793e-8 Identity = 37/111 (33.33%), Postives = 58/111 (52.25%), Query Frame = 0 Query: 272 VRGYEFSQRRMCFC-PQATIRPVRLDV-SAWSQGVKGVYEDRPNGAVPPEALAEYKTVGDLFLLLTQAYALNADRVEASYDPVFGYPNRIYIDQSADMADDDVMYEASALK 380 + Y ++ R CFC P+AT PV ++V + + + V +P V P+ Y TV LF ++ A A A + YDP FGYP I ID ++ +ADD++ + L+ Sbjct: 55 ISNYRYTFTRSCFCVPKAT-EPVVIEVRNGVTTSITSVETGQP---VDPKLFESYNTVPKLFNIIRDAIARRAANLTVKYDPKFGYPTEINIDYNSQIADDELFFTIQNLQ 161 The following BLAST results are available for this feature:
BLAST of EWM23487.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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