EWM23499.1, cds7177 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM23499.1 vs. NCBI_GenBank
Match: gi|585104570|gb|EWM23499.1| (hypothetical protein Naga_100414g1 [Nannochloropsis gaditana]) HSP 1 Score: 339.347 bits (869), Expect = 5.313e-118 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0
Query: 1 MVRRVPVTSPPFSAVPSQPPPKGKAQSPRPSAPRNVGESLTLAERKAARAIVAAYSDFWTQLRFRKGWAEPPFKKQDVLCLLDEAAGIVAKTRAELDKEEEGFKMRMVDGSAREFFHSVPYAPQDYPDRFVTDLVHATLQDGRGYVEGLTKSRRLPSVLLTGTPAPI 167
MVRRVPVTSPPFSAVPSQPPPKGKAQSPRPSAPRNVGESLTLAERKAARAIVAAYSDFWTQLRFRKGWAEPPFKKQDVLCLLDEAAGIVAKTRAELDKEEEGFKMRMVDGSAREFFHSVPYAPQDYPDRFVTDLVHATLQDGRGYVEGLTKSRRLPSVLLTGTPAPI
Sbjct: 1 MVRRVPVTSPPFSAVPSQPPPKGKAQSPRPSAPRNVGESLTLAERKAARAIVAAYSDFWTQLRFRKGWAEPPFKKQDVLCLLDEAAGIVAKTRAELDKEEEGFKMRMVDGSAREFFHSVPYAPQDYPDRFVTDLVHATLQDGRGYVEGLTKSRRLPSVLLTGTPAPI 167
BLAST of EWM23499.1 vs. NCBI_GenBank
Match: gi|553191542|ref|XP_005855395.1| (hypothetical protein NGA_0025720 [Nannochloropsis gaditana CCMP526] >gi|422293658|gb|EKU20958.1| hypothetical protein NGA_0025720 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 201.06 bits (510), Expect = 6.499e-64 Identity = 100/102 (98.04%), Postives = 100/102 (98.04%), Query Frame = 0
Query: 1 MVRRVPVTSPPFSAVPSQPPPKGKAQSPRPSAPRNVGESLTLAERKAARAIVAAYSDFWTQLRFRKGWAEPPFKKQDVLCLLDEAAGIVAKTRAELDKEEEG 102
MVRRVPVTSPPFSAVPSQPPPKGKAQSPRPSAPRNVGESLTLAERKAARAIVAAYSDFWTQLRFRKGWAEPPFKKQDVLCLLDEAAGIVAKTRAELDKE G
Sbjct: 1 MVRRVPVTSPPFSAVPSQPPPKGKAQSPRPSAPRNVGESLTLAERKAARAIVAAYSDFWTQLRFRKGWAEPPFKKQDVLCLLDEAAGIVAKTRAELDKERSG 102
BLAST of EWM23499.1 vs. NCBI_GenBank
Match: gi|910756338|gb|KNH03962.1| (BAG domain containing protein [Perkinsela sp. CCAP 1560/4] >gi|910756678|gb|KNH04202.1| BAG domain containing protein [Perkinsela sp. CCAP 1560/4]) HSP 1 Score: 92.0485 bits (227), Expect = 1.258e-20 Identity = 45/117 (38.46%), Postives = 67/117 (57.26%), Query Frame = 0
Query: 35 NVGESLTLAERKAARAIVAAYSDFWTQLRFRKGWAEPPFKKQDVLCLLDEAAGIVAKTRAELDKEEEGFKMRMVDGSAREFFHSVPYAPQDYPDRFVTDLVHATLQDGRGYVEGLTK 151
+ G T + + I+ AY +W +RFRKGWA+P F +DV +D AA V + R LDK G KMRM+DG+A+++ + + F+ D+VH++L+D GYVE L K
Sbjct: 3 STGRHWTDDDERKKEKIIDAYRAYWEHIRFRKGWAKPAFLYEDVRIPMDIAAEYVVQIRKILDKRSPGMKMRMIDGNAQQYLQGIT-EKDTRVETFIRDIVHSSLKDATGYVERLDK 118
BLAST of EWM23499.1 vs. NCBI_GenBank
Match: gi|955163868|emb|CUI15308.1| (Hypothetical protein, putative [Bodo saltans]) HSP 1 Score: 88.1965 bits (217), Expect = 6.479e-18 Identity = 44/106 (41.51%), Postives = 59/106 (55.66%), Query Frame = 0
Query: 51 IVAAYSDFWTQLRFRKGWAEPPFKKQDVLCLLDEAAGIVAKTRAELDKEEEGFKMRMVDGSAREFFHS---VPYAPQDYPDRFVTDLVHATLQDGRGYVEGLTKSR 153
+ AY F+ +RFR GWA PPF + V L EAA + + R LD ++ K+R DG A+ F H+ + Q +FV LVHAT +D GYVEGLTK +
Sbjct: 108 VFDAYMGFFEHIRFRNGWAIPPFSRDTVSPLFREAAAVTVRIRNFLDTQDSSTKLRKADGEAQTFLHTKEALEMVEQSSHRKFVIQLVHATFRDAVGYVEGLTKDK 213
BLAST of EWM23499.1 vs. NCBI_GenBank
Match: gi|676383805|ref|XP_009035181.1| (hypothetical protein AURANDRAFT_62710 [Aureococcus anophagefferens] >gi|323454508|gb|EGB10378.1| hypothetical protein AURANDRAFT_62710 [Aureococcus anophagefferens]) HSP 1 Score: 81.6481 bits (200), Expect = 1.411e-15 Identity = 47/106 (44.34%), Postives = 60/106 (56.60%), Query Frame = 0
Query: 44 ERKAARAIVAAYSDFWTQLRFRKGWAEPPFKKQDVLCLLDEAAGIVAKTRAELDKEEEGFKMRMVDGSAREFFHSVPYAPQDYPDRFVTDLVHATLQDGRGYVEGL 149
ER A AI AY+ F+ + FRKGW PPF ++D L A VA D GF +R DG+AR++ H P +P D P+ F+ L+HAT QD GYVEGL
Sbjct: 150 ERAQAAAIYDAYAGFFDHISFRKGWKRPPFPRRDADPLF-RRAARVAAMARSRDLRRAGFALRQPDGAARDWMHDAP-SPADSPNAFLRGLLHATFQDANGYVEGL 253
BLAST of EWM23499.1 vs. NCBI_GenBank
Match: gi|1129204583|gb|OLQ07046.1| (hypothetical protein AK812_SmicGene9661 [Symbiodinium microadriaticum]) HSP 1 Score: 68.9366 bits (167), Expect = 1.309e-10 Identity = 39/114 (34.21%), Postives = 57/114 (50.00%), Query Frame = 0
Query: 45 RKAARAIVAAYSDFWTQLRFRKGWAEPPFKKQDVLCLLDEAAGIVAKTRAELDKEEEGFKMRMVDGSAREFF---------HSVPYAPQDYPDRFVTDLVHATLQDGRGYVEGL 149
R ++ I YS F+ + RKGW PPFKK+DV +A +VA R +D++ G +R ++GS+ ++ H + P+ F LV ATL D G VEGL
Sbjct: 77 RDSSHEIFNGYSFFFEHIGIRKGWRTPPFKKEDVQAPFMASAEVVAVVRHRIDEQGNGMVLRQLEGSSHDWLWGWSPEKPPHQAEFLPE-----FFRGLVFATLSDANGLVEGL 185
BLAST of EWM23499.1 vs. NCBI_GenBank
Match: gi|470509791|ref|XP_004367756.1| (BAG domain containing protein [Acanthamoeba castellanii str. Neff] >gi|440801666|gb|ELR22675.1| BAG domain containing protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 68.1662 bits (165), Expect = 2.940e-10 Identity = 48/131 (36.64%), Postives = 65/131 (49.62%), Query Frame = 0
Query: 40 LTLAERKAARAIVAAYSDFWTQLRFRKGWAEPPFK-KQDVLCLLDEAAGIVAKTRAELDKEEEGFKM------------------RMVDGSAREFFHSVPYAPQDYPDRFVTDLVHATLQDGRGYV-EGLT 150
LT R+ + AAY +FW Q +FRKGWA+P F + V LL AA V + R+ D E G R +G ARE+ S+ P+ P +FV ++VHATL + GY+ EGLT
Sbjct: 40 LTSDMRRQIYELKAAYEEFWQQRKFRKGWAKPLFAFDEAVEELLARAAEAVVRIRSHFD-ELNGSSTVPRGLSKSASSIATAKLPRFKEGRAREYLCSLEQDPRAAPQQFVREIVHATLSNEDGYLEEGLT 169 The following BLAST results are available for this feature:
BLAST of EWM23499.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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