EWM23504.1, cds7169 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23504.1 vs. NCBI_GenBank
Match: gi|585104582|gb|EWM23504.1| (Beta-lactamase/transpeptidase-like protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 285.419 bits (729), Expect = 1.650e-97 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
Query: 1 MIYFSRTSKGVLVPLVLALLVACTHAMEVATSPEEMGMSSARLNQITQELQKLVDDGDLPGAAFMVTRGGKYVYHGEVGYADLETMTGFRSNTICRLLSMSKPVGAVAIMKLIEDKKLAFSDPLSKYLPEWAGAEGGR 138
MIYFSRTSKGVLVPLVLALLVACTHAMEVATSPEEMGMSSARLNQITQELQKLVDDGDLPGAAFMVTRGGKYVYHGEVGYADLETMTGFRSNTICRLLSMSKPVGAVAIMKLIEDKKLAFSDPLSKYLPEWAGAEGGR
Sbjct: 1 MIYFSRTSKGVLVPLVLALLVACTHAMEVATSPEEMGMSSARLNQITQELQKLVDDGDLPGAAFMVTRGGKYVYHGEVGYADLETMTGFRSNTICRLLSMSKPVGAVAIMKLIEDKKLAFSDPLSKYLPEWAGAEGGR 138
BLAST of EWM23504.1 vs. NCBI_GenBank
Match: gi|1101485331|gb|APB99426.1| (serine hydrolase [Polynucleobacter asymbioticus] >gi|1101487638|gb|APC01733.1| serine hydrolase [Polynucleobacter asymbioticus]) HSP 1 Score: 102.064 bits (253), Expect = 6.995e-23 Identity = 51/133 (38.35%), Postives = 79/133 (59.40%), Query Frame = 0
Query: 6 RTSKGVLVPLVLALLVACTHAMEV---ATSPEEMGMSSARLNQITQELQKLVDDGDLPGAAFMVTRGGKYVYHGEVGYADLETMTGFRSNTICRLLSMSKPVGAVAIMKLIEDKKLAFSDPLSKYLPEWAGAE 135
+ K ++ ++LA + A+ + PE++GMSSARL + LQ VD G++PGA M+ R GK VY VGY D T + I R+ SM+KP+ +VA M L+E+ K+ +DP+SK++PE+A +
Sbjct: 2 KYQKNIINQILLASFFVSSLALAQNIPSAKPEDVGMSSARLKNVKASLQAEVDKGNIPGAVVMINRKGKLVYSEVVGYQDKATNKPMSKDAIFRIYSMTKPLASVAAMMLVEEGKMQLADPISKFMPEFANMQ 134
BLAST of EWM23504.1 vs. NCBI_GenBank
Match: gi|1173672787|ref|WP_081354865.1| (serine hydrolase [Polynucleobacter asymbioticus]) HSP 1 Score: 102.064 bits (253), Expect = 7.273e-23 Identity = 51/133 (38.35%), Postives = 79/133 (59.40%), Query Frame = 0
Query: 6 RTSKGVLVPLVLALLVACTHAMEV---ATSPEEMGMSSARLNQITQELQKLVDDGDLPGAAFMVTRGGKYVYHGEVGYADLETMTGFRSNTICRLLSMSKPVGAVAIMKLIEDKKLAFSDPLSKYLPEWAGAE 135
+ K ++ ++LA + A+ + PE++GMSSARL + LQ VD G++PGA M+ R GK VY VGY D T + I R+ SM+KP+ +VA M L+E+ K+ +DP+SK++PE+A +
Sbjct: 10 KYQKNIINQILLASFFVSSLALAQNIPSAKPEDVGMSSARLKNVKASLQAEVDKGNIPGAVVMINRKGKLVYSEVVGYQDKATNKPMSKDAIFRIYSMTKPLASVAAMMLVEEGKMQLADPISKFMPEFANMQ 142
BLAST of EWM23504.1 vs. NCBI_GenBank
Match: gi|497351304|ref|WP_009665517.1| (hypothetical protein [Oxalobacteraceae bacterium IMCC9480] >gi|327548039|gb|EGF32774.1| beta-lactamase [Oxalobacteraceae bacterium IMCC9480]) HSP 1 Score: 99.3673 bits (246), Expect = 7.931e-22 Identity = 49/121 (40.50%), Postives = 70/121 (57.85%), Query Frame = 0
Query: 17 LALLVACTHAMEVATS-----PEEMGMSSARLNQITQELQKLVDDGDLPGAAFMVTRGGKYVYHGEVGYADLETMTGFRSNTICRLLSMSKPVGAVAIMKLIEDKKLAFSDPLSKYLPEWA 132
+ LL+A M + PEE+G+SSARL + LQ VD+G +PGA M+ R GK Y +G+ D + I R+ SM+KP+ +V M L+ED K+ +DP+SKYLPE+A
Sbjct: 10 VGLLLAAATGMAIGQGLPTARPEEVGLSSARLAAMKTSLQAEVDNGKIPGAIVMIVRNGKLAYSETIGFQDKPAGKALHQDAIFRIYSMTKPLASVGAMMLVEDGKIQLTDPISKYLPEFA 130
BLAST of EWM23504.1 vs. NCBI_GenBank
Match: gi|1180043465|ref|WP_083564309.1| (serine hydrolase [Polynucleobacter sp. MWH-Adler-W8]) HSP 1 Score: 98.9821 bits (245), Expect = 1.070e-21 Identity = 51/133 (38.35%), Postives = 80/133 (60.15%), Query Frame = 0
Query: 6 RTSKGVLVPLVLA--LLVACTHAMEVATS-PEEMGMSSARLNQITQELQKLVDDGDLPGAAFMVTRGGKYVYHGEVGYADLETMTGFRSNTICRLLSMSKPVGAVAIMKLIEDKKLAFSDPLSKYLPEWAGAE 135
R K ++ L++A + + A + T+ PE++GMSSARL + LQ VD G++PGA M+ R GK VY VGY D ++I R+ SM+KP+ +VA M L+ + K+ +DP+SK++PE+A +
Sbjct: 2 RYQKNLINKLLVASFFISSLAIAQNIPTAKPEDVGMSSARLKNVKASLQAEVDKGNIPGAVVMINRKGKLVYSEVVGYQDKSANKAMSKDSIFRIYSMTKPLASVAAMILVGEGKMQLADPISKFMPEFANMQ 134
BLAST of EWM23504.1 vs. NCBI_GenBank
Match: gi|1099912326|emb|SFK20823.1| (CubicO group peptidase, beta-lactamase class C family [Amycolatopsis sacchari]) HSP 1 Score: 98.2117 bits (243), Expect = 1.692e-21 Identity = 43/106 (40.57%), Postives = 68/106 (64.15%), Query Frame = 0
Query: 27 MEVATSPEEMGMSSARLNQITQELQKLVDDGDLPGAAFMVTRGGKYVYHGEVGYADLETMTGFRSNTICRLLSMSKPVGAVAIMKLIEDKKLAFSDPLSKYLPEWA 132
+E+A P E+G ++RL +I + + VDDG LPG +VTR G V+H G++D+E ++T+ R+ SM+KPV +VA M L E+ +DP+S++LPE+A
Sbjct: 3 LELAAEPAELGFDASRLERIDRHFARFVDDGRLPGWQIVVTRRGNVVHHSRYGHSDVEAGKPVEADTLWRIFSMTKPVTSVAAMMLYEEGAFELTDPISRWLPEFA 108
BLAST of EWM23504.1 vs. NCBI_GenBank
Match: gi|365272994|emb|CCD86583.1| (putative beta-lactamase [Bradyrhizobium sp. ORS 285] >gi|1200886731|emb|SMX59718.1| putative beta-lactamase [Bradyrhizobium sp. ORS 285]) HSP 1 Score: 98.2117 bits (243), Expect = 2.349e-21 Identity = 48/101 (47.52%), Postives = 65/101 (64.36%), Query Frame = 0
Query: 32 SPEEMGMSSARLNQITQELQ-KLVDDGDLPGAAFMVTRGGKYVYHGEVGYADLETMTGFRSNTICRLLSMSKPVGAVAIMKLIEDKKLAFSDPLSKYLPEW 131
SPE +GMS A L +I LQ + VD G PGA MV R GK V+ +GYAD+E TI R+ SM+KP+ +VA M L+E+ K+A +P++KY+PEW
Sbjct: 29 SPETVGMSKAALARIDAHLQQRYVDAGRFPGAQLMVYRRGKIVHQSSLGYADVERKVPVTDQTIYRIYSMTKPITSVAFMMLVEEGKVALDEPVAKYIPEW 129
BLAST of EWM23504.1 vs. NCBI_GenBank
Match: gi|737677258|ref|WP_035646397.1| (serine hydrolase [Bradyrhizobium sp. ORS 285]) HSP 1 Score: 97.8265 bits (242), Expect = 2.521e-21 Identity = 48/101 (47.52%), Postives = 65/101 (64.36%), Query Frame = 0
Query: 32 SPEEMGMSSARLNQITQELQ-KLVDDGDLPGAAFMVTRGGKYVYHGEVGYADLETMTGFRSNTICRLLSMSKPVGAVAIMKLIEDKKLAFSDPLSKYLPEW 131
SPE +GMS A L +I LQ + VD G PGA MV R GK V+ +GYAD+E TI R+ SM+KP+ +VA M L+E+ K+A +P++KY+PEW
Sbjct: 8 SPETVGMSKAALARIDAHLQQRYVDAGRFPGAQLMVYRRGKIVHQSSLGYADVERKVPVTDQTIYRIYSMTKPITSVAFMMLVEEGKVALDEPVAKYIPEW 108
BLAST of EWM23504.1 vs. NCBI_GenBank
Match: gi|1111350420|gb|OJI04000.1| (serine hydrolase [Polynucleobacter sp. MWH-Adler-W8]) HSP 1 Score: 97.4413 bits (241), Expect = 3.120e-21 Identity = 45/103 (43.69%), Postives = 66/103 (64.08%), Query Frame = 0
Query: 33 PEEMGMSSARLNQITQELQKLVDDGDLPGAAFMVTRGGKYVYHGEVGYADLETMTGFRSNTICRLLSMSKPVGAVAIMKLIEDKKLAFSDPLSKYLPEWAGAE 135
PE++GMSSARL + LQ VD G++PGA M+ R GK VY VGY D ++I R+ SM+KP+ +VA M L+ + K+ +DP+SK++PE+A +
Sbjct: 15 PEDVGMSSARLKNVKASLQAEVDKGNIPGAVVMINRKGKLVYSEVVGYQDKSANKAMSKDSIFRIYSMTKPLASVAAMILVGEGKMQLADPISKFMPEFANMQ 117
BLAST of EWM23504.1 vs. NCBI_GenBank
Match: gi|499900894|ref|WP_011581628.1| (serine hydrolase [Chelativorans sp. BNC1] >gi|110285627|gb|ABG63686.1| beta-lactamase [Chelativorans sp. BNC1]) HSP 1 Score: 97.8265 bits (242), Expect = 3.204e-21 Identity = 52/114 (45.61%), Postives = 72/114 (63.16%), Query Frame = 0
Query: 24 THAMEVATSPEEMGMSSARLNQITQELQKLVDDGDLPGAAFMVTRGGKYVYHGEVGYADLETMTGFRSNTICRLLSMSKPVGAVAIMKLIEDKKLAFSDPLSKYLPEWAGAEGG 137
TH + A +PE++G S RL++I L+ ++ G LPGA +V R GK VY+ G +D E T R ++I RL SMSKP+ VA M L+ED K+ DP+SKYLPE+ A+ G
Sbjct: 32 THKL-TAAAPEDVGFSPDRLSKIGAVLRSDIERGKLPGAVVLVARHGKIVYNEVFGVSDPEHGTAMRIDSIFRLYSMSKPITQVAAMMLVEDGKIGLEDPISKYLPEFENAKVG 144 The following BLAST results are available for this feature:
BLAST of EWM23504.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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